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The map label for this gene is fimA [H]

Identifier: 94313883

GI number: 94313883

Start: 1629707

End: 1630261

Strand: Reverse

Name: fimA [H]

Synonym: Rmet_4961

Alternate gene names: 94313883

Gene position: 1630261-1629707 (Counterclockwise)

Preceding gene: 94313884

Following gene: 94313882

Centisome position: 63.19

GC content: 63.24

Gene sequence:

>555_bases
ATGAAAACCAAGCTTATTTCCGCCACGATCGTAGCCATCGCCGCCATGGGTGCCCAACTCGCCCATGCCGCGCCGGACGG
CACTATCACGTTCAACGGCAACATCACCGCCACGACCTGCAAGATCAACGGTGGCACCGCGCCGGTGAACTTCACGGTCA
CGATGCCGACCGTTTCGACGACCACGCTGAACGCCCTGGACGCGACCGCCGGCCGCACGGGCTTCCGGATTGCGCTGACG
AACTGCACGCCGGCCACGGGCAACGTCCACACGTTCTTCGAGGCAGGTTCCACCGTCAATCTGGGCACTGGTCGACTGAT
CAACGCTGGCTCGGCCACGGCAGTCGAAATCGAACTGCTGAACAAGGACACCTCGGTCATCACCGTGGGTGCCTCGGATG
GCGTTGGTGCCGGTCTGCAGAACTCGAAGTCGGTGCCGATCACCGCTGGCGCCGCCAATCTGGACTACTACGCGCAGTAT
CACTCGACCTCGGCCGCCGGCTCGGGTGCGGGCGCCGTCAGCTCGACGGTGACGTACGACATTTCCTACAACTAA

Upstream 100 bases:

>100_bases
AAAGGAAGTGCATTCTCCGATCCGCGGCAGCATTTTGTTTTCGATCTCTGGCTAGGCCCTCCGTCTATATTTTTGATTCC
TGTCTCTTGATAATTCCGAT

Downstream 100 bases:

>100_bases
GCAGTCTGCCGGGATGGCGCCTTGGCGTCTGTCAGGGGGCCATCCGGCTTCAGCACACCGAATTCGCATTAGCTGTCATG
AAAACTAGGTCAACGATTCA

Product: Fimbrial protein

Products: NA

Alternate protein names: F17 fimbrial adhesive antigen; F17 pilin [H]

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKTKLISATIVAIAAMGAQLAHAAPDGTITFNGNITATTCKINGGTAPVNFTVTMPTVSTTTLNALDATAGRTGFRIALT
NCTPATGNVHTFFEAGSTVNLGTGRLINAGSATAVEIELLNKDTSVITVGASDGVGAGLQNSKSVPITAGAANLDYYAQY
HSTSAAGSGAGAVSSTVTYDISYN

Sequences:

>Translated_184_residues
MKTKLISATIVAIAAMGAQLAHAAPDGTITFNGNITATTCKINGGTAPVNFTVTMPTVSTTTLNALDATAGRTGFRIALT
NCTPATGNVHTFFEAGSTVNLGTGRLINAGSATAVEIELLNKDTSVITVGASDGVGAGLQNSKSVPITAGAANLDYYAQY
HSTSAAGSGAGAVSSTVTYDISYN
>Mature_184_residues
MKTKLISATIVAIAAMGAQLAHAAPDGTITFNGNITATTCKINGGTAPVNFTVTMPTVSTTTLNALDATAGRTGFRIALT
NCTPATGNVHTFFEAGSTVNLGTGRLINAGSATAVEIELLNKDTSVITVGASDGVGAGLQNSKSVPITAGAANLDYYAQY
HSTSAAGSGAGAVSSTVTYDISYN

Specific function: Fimbriae (also called pili), polar filaments radiating from the surface of the bacterium to a length of 0.5-1.5 micrometers and numbering 100-300 per cell, enable bacteria to colonize the epithelium of specific host organs [H]

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18367; Mature: 18367

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKLISATIVAIAAMGAQLAHAAPDGTITFNGNITATTCKINGGTAPVNFTVTMPTVST
CCCEEHHHHHHHHHHHCHHHHHCCCCCEEEECCCEEEEEEEECCCCCCEEEEEEECCCCE
TTLNALDATAGRTGFRIALTNCTPATGNVHTFFEAGSTVNLGTGRLINAGSATAVEIELL
EEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECCCEEECCCCEEEECCCCEEEEEEEE
NKDTSVITVGASDGVGAGLQNSKSVPITAGAANLDYYAQYHSTSAAGSGAGAVSSTVTYD
CCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEE
ISYN
EEEC
>Mature Secondary Structure
MKTKLISATIVAIAAMGAQLAHAAPDGTITFNGNITATTCKINGGTAPVNFTVTMPTVST
CCCEEHHHHHHHHHHHCHHHHHCCCCCEEEECCCEEEEEEEECCCCCCEEEEEEECCCCE
TTLNALDATAGRTGFRIALTNCTPATGNVHTFFEAGSTVNLGTGRLINAGSATAVEIELL
EEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECCCEEECCCCEEEECCCCEEEEEEEE
NKDTSVITVGASDGVGAGLQNSKSVPITAGAANLDYYAQYHSTSAAGSGAGAVSSTVTYD
CCCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEE
ISYN
EEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2897333 [H]