| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is 94313768
Identifier: 94313768
GI number: 94313768
Start: 1503246
End: 1504301
Strand: Direct
Name: 94313768
Synonym: Rmet_4846
Alternate gene names: NA
Gene position: 1503246-1504301 (Clockwise)
Preceding gene: 94313767
Following gene: 94313769
Centisome position: 58.26
GC content: 67.61
Gene sequence:
>1056_bases ATGCATCCTCTTCGCCATCGTCTTGCCCTGGCCACGCTGACGCTTGCCACTGCCACCGGCTACACAGCCTCCGCCCTAGT CGCACTCATCGCACCCTTCGCACCCAACGCACACGCGCAGCCCGCGCCCGTCGTCTGGCAGATGGCGACCGAGTACCCGG CCACGTCGATGCCCGGCGAAGGACTGACCACGTTTGCCCAGGAAGTCGCTACCCGCACGCAGGGCACATTGGCGCCGCAG CCGACCTTCGACGCCAGCGCGGGCGTCAAGTCCGCCCAGATGCCGGCCGCCATCCGCGACGGCAAACTGCAGGCCGGCGA TGCTTTCGGCGGCGCGTTGGGCGAGGTCGATCCGATTTTCCTGCTGTCGTCGCTGCCATTCGTAGCGACGTCGGTGGACA AGGCCCATCGCCTGGCCGATCTGGCCCGCGCGGACTACGCGCAGGCATTCGAGAAGCAGGGCCAGCACCTGCTCTACATC ACACCCTGGCCGCCAACGGGCCTCTGGACACACAAACCCGTGGGCACGCTCGACGATCTGCGCACGCTGTCCGTGCGCGC CTATGACGAAACGTCCGCCGACGTCATGCGCGCTGCGGGAGCGAAGGCGCAGAACCTGTCGTTCGCCGATGCCATGCCGC GTCTGAAGGATGGCTCGGTCAATGCCGTGCTTTCGTCGGGCGATGGCGGCGCGGGCCGCAAGCTCTGGGACTACCTGCCC TACTTCACGGCCATCGGCTACGCCATGCCGTTGTCGTTTACGACCGTCAACGCAGCCGCCTGGCAATCCCTGACACCCGC CCAGCGAGACGCCGTGACCGCCGCCGCCAGAGCGACCGAAGGCAAACAATGGTCGCGGCTGAATACCCGCCTGACCGAGA ACACCGCCCGAATGCGCGCCAACGGTGTGACCATCGACGACAATCCAGCGCCCGCCGTGCAACAGGCCCTGCAAGCCGCC GGGCTGAGCGCGGTCGGCGTCTGGCAGACACGCGTGGGCGAGCGCGGAGCCGCCTTGCTGAAGACCTATTTCAGCGCGGA GGCAGGGCTCCACTGA
Upstream 100 bases:
>100_bases CATCCCCCCATGGCGATGCCTATAATGCACTGGCACCCGGCATCGCCCGCAGAGGCGGAGCCCGGCATGCCGACATTGCC CACCCACCCTCCGCCCCGCC
Downstream 100 bases:
>100_bases GCATTGCGGCGTGGGTCGGCGACCGAATGATTGCCCTTTAGGGCAGCGGGATTACCCTTTGTGCCAATGGCGCCCGACCT CCGGGTTGCCGATACTCGCG
Product: putative TRAP-type C4-dicarboxylate transport system, periplasmic component
Products: NA
Alternate protein names: TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; TRAP Dicarboxylate Transporter-DctP Subunit; Signal Peptide Protein; Exported Protein; Twin-Arginine Translocation Pathway Signal; Trap Dicarboxylate Transporter Dctp Subunit; TRAP Dicarboxylate Transporter; Trap Dicarboxylate Transporter-Dctp Subunit; TRAP-Type C4-Dicarboxylate Transporter Periplasmic Protein; Secreted Protein
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MHPLRHRLALATLTLATATGYTASALVALIAPFAPNAHAQPAPVVWQMATEYPATSMPGEGLTTFAQEVATRTQGTLAPQ PTFDASAGVKSAQMPAAIRDGKLQAGDAFGGALGEVDPIFLLSSLPFVATSVDKAHRLADLARADYAQAFEKQGQHLLYI TPWPPTGLWTHKPVGTLDDLRTLSVRAYDETSADVMRAAGAKAQNLSFADAMPRLKDGSVNAVLSSGDGGAGRKLWDYLP YFTAIGYAMPLSFTTVNAAAWQSLTPAQRDAVTAAARATEGKQWSRLNTRLTENTARMRANGVTIDDNPAPAVQQALQAA GLSAVGVWQTRVGERGAALLKTYFSAEAGLH
Sequences:
>Translated_351_residues MHPLRHRLALATLTLATATGYTASALVALIAPFAPNAHAQPAPVVWQMATEYPATSMPGEGLTTFAQEVATRTQGTLAPQ PTFDASAGVKSAQMPAAIRDGKLQAGDAFGGALGEVDPIFLLSSLPFVATSVDKAHRLADLARADYAQAFEKQGQHLLYI TPWPPTGLWTHKPVGTLDDLRTLSVRAYDETSADVMRAAGAKAQNLSFADAMPRLKDGSVNAVLSSGDGGAGRKLWDYLP YFTAIGYAMPLSFTTVNAAAWQSLTPAQRDAVTAAARATEGKQWSRLNTRLTENTARMRANGVTIDDNPAPAVQQALQAA GLSAVGVWQTRVGERGAALLKTYFSAEAGLH >Mature_351_residues MHPLRHRLALATLTLATATGYTASALVALIAPFAPNAHAQPAPVVWQMATEYPATSMPGEGLTTFAQEVATRTQGTLAPQ PTFDASAGVKSAQMPAAIRDGKLQAGDAFGGALGEVDPIFLLSSLPFVATSVDKAHRLADLARADYAQAFEKQGQHLLYI TPWPPTGLWTHKPVGTLDDLRTLSVRAYDETSADVMRAAGAKAQNLSFADAMPRLKDGSVNAVLSSGDGGAGRKLWDYLP YFTAIGYAMPLSFTTVNAAAWQSLTPAQRDAVTAAARATEGKQWSRLNTRLTENTARMRANGVTIDDNPAPAVQQALQAA GLSAVGVWQTRVGERGAALLKTYFSAEAGLH
Specific function: Unknown
COG id: COG1638
COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37085; Mature: 37085
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPLRHRLALATLTLATATGYTASALVALIAPFAPNAHAQPAPVVWQMATEYPATSMPGE CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCC GLTTFAQEVATRTQGTLAPQPTFDASAGVKSAQMPAAIRDGKLQAGDAFGGALGEVDPIF HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHH LLSSLPFVATSVDKAHRLADLARADYAQAFEKQGQHLLYITPWPPTGLWTHKPVGTLDDL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHH RTLSVRAYDETSADVMRAAGAKAQNLSFADAMPRLKDGSVNAVLSSGDGGAGRKLWDYLP HEEEEEECCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHH YFTAIGYAMPLSFTTVNAAAWQSLTPAQRDAVTAAARATEGKQWSRLNTRLTENTARMRA HHHHHHHHHCCEEEEECHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC NGVTIDDNPAPAVQQALQAAGLSAVGVWQTRVGERGAALLKTYFSAEAGLH CCEEECCCCCHHHHHHHHHCCCCCEEHHHHHHCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHPLRHRLALATLTLATATGYTASALVALIAPFAPNAHAQPAPVVWQMATEYPATSMPGE CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCC GLTTFAQEVATRTQGTLAPQPTFDASAGVKSAQMPAAIRDGKLQAGDAFGGALGEVDPIF HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHH LLSSLPFVATSVDKAHRLADLARADYAQAFEKQGQHLLYITPWPPTGLWTHKPVGTLDDL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHH RTLSVRAYDETSADVMRAAGAKAQNLSFADAMPRLKDGSVNAVLSSGDGGAGRKLWDYLP HEEEEEECCCHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHH YFTAIGYAMPLSFTTVNAAAWQSLTPAQRDAVTAAARATEGKQWSRLNTRLTENTARMRA HHHHHHHHHCCEEEEECHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC NGVTIDDNPAPAVQQALQAAGLSAVGVWQTRVGERGAALLKTYFSAEAGLH CCEEECCCCCHHHHHHHHHCCCCCEEHHHHHHCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA