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The map label for this gene is qseB [H]

Identifier: 94313751

GI number: 94313751

Start: 1483082

End: 1483789

Strand: Direct

Name: qseB [H]

Synonym: Rmet_4829

Alternate gene names: 94313751

Gene position: 1483082-1483789 (Clockwise)

Preceding gene: 94313747

Following gene: 94313752

Centisome position: 57.48

GC content: 66.67

Gene sequence:

>708_bases
ATGCGAATCCTGATTGTTGAAGACGACCCGATGCTCGGCGACGGGCTCCAGCGCGGCCTGAAACTGATAGGTCATGCCGT
GGACTGGTTTGGCACCGCCGCCGAAGCCGACCGTGCCATTGGCATGATGCACTACGACGCCGTAGTGCTGGACCTTGGTC
TGCCAGACGACGATGGCGTGGCGTTGCTTGGCCGTTGGCGCCAGCAGGGCCGGCAGATGCCAGTCGTGGTGCTGACCGCG
CGCGATGCCGTGGCCAGCCGGATCTCCGGGCTAGACGCCGGCGCCGATGACTACCTGGTCAAGCCAGTGGAACTGGACGA
GCTGGCCGCCCGGCTTCGCGCAGTCACCCGCCGCGCGGCCGGGATGCCCGAGCCCGTCTGGCGTCATGGCCCACTCGAGT
ACCAGCCCGCTGCGCGCCTGGCGCTCTGGCACGGCAAGGCCGTGGACCTGACCAGCCGGGAATCCATGCTGCTGGAACTG
TTGCTGACCTACCCCAACCGTGTGCTGACGCGCGAATTCCTGCGCGACAAGCTCTATGACTGGGACAAAGGCTCCGAAAG
CAACACGCTGGAAGTCCACATCCATCACCTGCGCAAGAAGCTCCATCCCGGCATCGTGCGCACGCTGCGCGGCGCCGGCT
ACACCCTGGGCACGCTCGAGGCGATCGAGATCGGCACCTCGGAACCCGAGGGCGGGGATCGCGCATGA

Upstream 100 bases:

>100_bases
GCGACACACAGCCTGCGATGCTACGCTTTCCACCGGCTGATATGGACCTTACGGCGCGATTAATGCCAATATCTCAAACA
GCCGTTTCAGTCACTATAAG

Downstream 100 bases:

>100_bases
CGCTGCGGCGGCGGCTGATCCTGGCCGTCCTGGCCGCCGTGACGTTTGCATGGGTACTGACCAGCGCATTGATCTACCTG
AGCGCCCAGGAAGAAATCAA

Product: DNA-binding response regulator in two-component regulatory system with QseC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MRILIVEDDPMLGDGLQRGLKLIGHAVDWFGTAAEADRAIGMMHYDAVVLDLGLPDDDGVALLGRWRQQGRQMPVVVLTA
RDAVASRISGLDAGADDYLVKPVELDELAARLRAVTRRAAGMPEPVWRHGPLEYQPAARLALWHGKAVDLTSRESMLLEL
LLTYPNRVLTREFLRDKLYDWDKGSESNTLEVHIHHLRKKLHPGIVRTLRGAGYTLGTLEAIEIGTSEPEGGDRA

Sequences:

>Translated_235_residues
MRILIVEDDPMLGDGLQRGLKLIGHAVDWFGTAAEADRAIGMMHYDAVVLDLGLPDDDGVALLGRWRQQGRQMPVVVLTA
RDAVASRISGLDAGADDYLVKPVELDELAARLRAVTRRAAGMPEPVWRHGPLEYQPAARLALWHGKAVDLTSRESMLLEL
LLTYPNRVLTREFLRDKLYDWDKGSESNTLEVHIHHLRKKLHPGIVRTLRGAGYTLGTLEAIEIGTSEPEGGDRA
>Mature_235_residues
MRILIVEDDPMLGDGLQRGLKLIGHAVDWFGTAAEADRAIGMMHYDAVVLDLGLPDDDGVALLGRWRQQGRQMPVVVLTA
RDAVASRISGLDAGADDYLVKPVELDELAARLRAVTRRAAGMPEPVWRHGPLEYQPAARLALWHGKAVDLTSRESMLLEL
LLTYPNRVLTREFLRDKLYDWDKGSESNTLEVHIHHLRKKLHPGIVRTLRGAGYTLGTLEAIEIGTSEPEGGDRA

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=217, Percent_Identity=48.3870967741936, Blast_Score=209, Evalue=2e-55,
Organism=Escherichia coli, GI1790552, Length=216, Percent_Identity=45.3703703703704, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1787375, Length=218, Percent_Identity=34.8623853211009, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1786784, Length=227, Percent_Identity=35.2422907488987, Blast_Score=128, Evalue=3e-31,
Organism=Escherichia coli, GI1789809, Length=231, Percent_Identity=35.0649350649351, Blast_Score=114, Evalue=5e-27,
Organism=Escherichia coli, GI1786599, Length=227, Percent_Identity=33.4801762114537, Blast_Score=110, Evalue=7e-26,
Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=35.1351351351351, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1788394, Length=220, Percent_Identity=34.0909090909091, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=31.3636363636364, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1786911, Length=219, Percent_Identity=35.6164383561644, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI2367329, Length=229, Percent_Identity=32.7510917030568, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1787229, Length=223, Percent_Identity=29.5964125560538, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1790863, Length=236, Percent_Identity=25.8474576271186, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1788713, Length=164, Percent_Identity=31.7073170731707, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=32.7102803738318, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1790299, Length=131, Percent_Identity=31.2977099236641, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26038; Mature: 26038

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILIVEDDPMLGDGLQRGLKLIGHAVDWFGTAAEADRAIGMMHYDAVVLDLGLPDDDGV
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEECEEEEECCCCCCCCH
ALLGRWRQQGRQMPVVVLTARDAVASRISGLDAGADDYLVKPVELDELAARLRAVTRRAA
HHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHC
GMPEPVWRHGPLEYQPAARLALWHGKAVDLTSRESMLLELLLTYPNRVLTREFLRDKLYD
CCCCCHHCCCCCCCCCCHHEEEECCCEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCC
WDKGSESNTLEVHIHHLRKKLHPGIVRTLRGAGYTLGTLEAIEIGTSEPEGGDRA
CCCCCCCCEEEEHHHHHHHHHCHHHHHHHHCCCCEECCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MRILIVEDDPMLGDGLQRGLKLIGHAVDWFGTAAEADRAIGMMHYDAVVLDLGLPDDDGV
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEECEEEEECCCCCCCCH
ALLGRWRQQGRQMPVVVLTARDAVASRISGLDAGADDYLVKPVELDELAARLRAVTRRAA
HHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHC
GMPEPVWRHGPLEYQPAARLALWHGKAVDLTSRESMLLELLLTYPNRVLTREFLRDKLYD
CCCCCHHCCCCCCCCCCHHEEEECCCEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCC
WDKGSESNTLEVHIHHLRKKLHPGIVRTLRGAGYTLGTLEAIEIGTSEPEGGDRA
CCCCCCCCEEEEHHHHHHHHHCHHHHHHHHCCCCEECCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]