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The map label for this gene is bkdR [H]

Identifier: 94313481

GI number: 94313481

Start: 1169244

End: 1169714

Strand: Reverse

Name: bkdR [H]

Synonym: Rmet_4559

Alternate gene names: 94313481

Gene position: 1169714-1169244 (Counterclockwise)

Preceding gene: 94313483

Following gene: 94313479

Centisome position: 45.34

GC content: 62.0

Gene sequence:

>471_bases
ATGCTGGACATTGAACTTGATGCCACCGACATCCGGATTCTCGGCGAACTGCAGCGTGATGGCAGCCTGACCAATGTAGA
GCTGGCCAGCCGGGTCAGTCTCTCGCCCTCGCCATGCCTGGCGCGAGTGAAGCGTCTGGAGAAAATCGGCGTGATCTCGC
GGCGCGTCACGCTGCTCGACGCGCGTCGGCTGGGCCTGAAAGTCGTGGTGTTCATCTCCGTGTCGCTCGACAAGCAGCGG
CGCGAAACACTCGATACGTTCGAGCGGCGAATCGCCGCGTTGCCTCAGGTGATGGAGTGCTACCTGATGTCAGGAGATGC
CGACTATCTGCTGCGTGTAGTGGTGCCCGACGTGGAAGCGCTCGAGCGGTTGATCATCGACCAGATCACTCGCATCCCCG
GCGTGGCGAGCATTCGGTCGAGTTTCGCGCTGAAGCAGGTGCTGTACAGCACGGCGCTGCCGCTCGGTTAG

Upstream 100 bases:

>100_bases
AAGTCTACGATTCATCGCCCGGCATCAGTAACCGGATCGCACTGCTGCAGTCGTTCAATACGGCATAGAATGCTGAGAGG
TAAAACTTTAGAGGCATGAC

Downstream 100 bases:

>100_bases
GTCGAATCCCGCAAATTCATAGCCTGGCGCGCACGGCCGCCCGCAGCGCTGGCAGCAATTCGGCTTCGAACCAGGGCTGC
TTGCGCATCCAGCCGACAAC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MLDIELDATDIRILGELQRDGSLTNVELASRVSLSPSPCLARVKRLEKIGVISRRVTLLDARRLGLKVVVFISVSLDKQR
RETLDTFERRIAALPQVMECYLMSGDADYLLRVVVPDVEALERLIIDQITRIPGVASIRSSFALKQVLYSTALPLG

Sequences:

>Translated_156_residues
MLDIELDATDIRILGELQRDGSLTNVELASRVSLSPSPCLARVKRLEKIGVISRRVTLLDARRLGLKVVVFISVSLDKQR
RETLDTFERRIAALPQVMECYLMSGDADYLLRVVVPDVEALERLIIDQITRIPGVASIRSSFALKQVLYSTALPLG
>Mature_156_residues
MLDIELDATDIRILGELQRDGSLTNVELASRVSLSPSPCLARVKRLEKIGVISRRVTLLDARRLGLKVVVFISVSLDKQR
RETLDTFERRIAALPQVMECYLMSGDADYLLRVVVPDVEALERLIIDQITRIPGVASIRSSFALKQVLYSTALPLG

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=149, Percent_Identity=40.2684563758389, Blast_Score=124, Evalue=2e-30,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=34, Blast_Score=105, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17405; Mature: 17405

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDIELDATDIRILGELQRDGSLTNVELASRVSLSPSPCLARVKRLEKIGVISRRVTLLD
CEEEECCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ARRLGLKVVVFISVSLDKQRRETLDTFERRIAALPQVMECYLMSGDADYLLRVVVPDVEA
HHHCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHH
LERLIIDQITRIPGVASIRSSFALKQVLYSTALPLG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLDIELDATDIRILGELQRDGSLTNVELASRVSLSPSPCLARVKRLEKIGVISRRVTLLD
CEEEECCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ARRLGLKVVVFISVSLDKQRRETLDTFERRIAALPQVMECYLMSGDADYLLRVVVPDVEA
HHHCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHH
LERLIIDQITRIPGVASIRSSFALKQVLYSTALPLG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]