Click here to switch to the map view.

The map label for this gene is uspA13

Identifier: 94313443

GI number: 94313443

Start: 1122677

End: 1123525

Strand: Direct

Name: uspA13

Synonym: Rmet_4518

Alternate gene names: NA

Gene position: 1122677-1123525 (Clockwise)

Preceding gene: 94313441

Following gene: 94313446

Centisome position: 43.51

GC content: 67.49

Gene sequence:

>849_bases
ATGGACATCTCGGCGATCATGGTCCACGTCGATGCCTCGCAATCAGTGGAGGCCCGGCTCTGTCATGCCGTGGCGCTGGC
CGGATCGTTTAACGCCACGCTGATCGGCCTGCTCTCGCTAAGCGCGGACGAGCCAGCGTGGGTCTACCGCACTGCGGACG
GCCGCCGCGAGCGCCAGGCCTACGAGCCGGATCTTGGCGCCGCATGTGAAGCCGCCCGGGAAGCCTTCGATATCGCCACC
GAAGCCGCGACGTTTGCCGTCGACTGGCGCGTCGGCGAGGGCGCACCCACCGACGCCATCCAGTGCGAAGGCCGGCTGGC
CGACCTGCTGATCGTCGGCCAGCCGGACCGATTGAACACCGACAGCGAGGTAGCCCGGCACTTCGTTGAGACGGCCATTC
TTTCGAGTGGCCGCCCGGTGCTGGTCATTCCTCAAGGGCCGCTGCCGGACGCCTCCACCTTCCCCTATAGCTCGATCGTG
GTGGCCTGGAACGGTACCCGCGAATCCGCGCGTGCGCTGCATGACGCGTTGCCGTTGCTCAAGCGCGCCACCCAGGTCGA
CGTGGTGTCCTGCATTCCTCCGCACGCGCGCCGCAAGGCCGAGCTCTCCCCGCCCGCCTACGCGGCAAACTGGCTGGCTC
GGCATGGCGTGCACGCGAGCATGGTCGAGATGGTGCTGGAACGATCGGCCGATATCGGCGAGTCACTGCTTGCCATCGCC
GGCCAGCGCCGGGCCGACCTGCTGGTTTGTGGCGCATATGGCCGGGGACTGCTGCGCGAGGAATTGCTGGGTGGCGTGAC
GGACACCGTGCTGCGCCACGCCACGATTCCCACCCTCTTTTCCTACTAG

Upstream 100 bases:

>100_bases
GAATCAGGCGCTCTTGATCTGTCGCAACCATACGCGGCACATCACGCATACATTTGAGACCCAAATGGCGCCGAAGCGCC
TTGCTTTTTCAGGAGACCAC

Downstream 100 bases:

>100_bases
CCGCGCCGACACCCCTTGCTCGGGCGCTCAGTCGAGCGCTTAGTCGAGCGCTTAGTCGAGCGCTTAGTCGGGCGCTTAGT
CGAGCGGATAGATACCCCGG

Product: universal stress protein UspA family

Products: NA

Alternate protein names: UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family; Universal Stress Protein Family Protein; Universal Stress Protein UspA Family UspA; UspA Stress Protein; Universal Stress Family Protein; Universal Stress Protein UspA Family; Universal Stress Family; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MDISAIMVHVDASQSVEARLCHAVALAGSFNATLIGLLSLSADEPAWVYRTADGRRERQAYEPDLGAACEAAREAFDIAT
EAATFAVDWRVGEGAPTDAIQCEGRLADLLIVGQPDRLNTDSEVARHFVETAILSSGRPVLVIPQGPLPDASTFPYSSIV
VAWNGTRESARALHDALPLLKRATQVDVVSCIPPHARRKAELSPPAYAANWLARHGVHASMVEMVLERSADIGESLLAIA
GQRRADLLVCGAYGRGLLREELLGGVTDTVLRHATIPTLFSY

Sequences:

>Translated_282_residues
MDISAIMVHVDASQSVEARLCHAVALAGSFNATLIGLLSLSADEPAWVYRTADGRRERQAYEPDLGAACEAAREAFDIAT
EAATFAVDWRVGEGAPTDAIQCEGRLADLLIVGQPDRLNTDSEVARHFVETAILSSGRPVLVIPQGPLPDASTFPYSSIV
VAWNGTRESARALHDALPLLKRATQVDVVSCIPPHARRKAELSPPAYAANWLARHGVHASMVEMVLERSADIGESLLAIA
GQRRADLLVCGAYGRGLLREELLGGVTDTVLRHATIPTLFSY
>Mature_282_residues
MDISAIMVHVDASQSVEARLCHAVALAGSFNATLIGLLSLSADEPAWVYRTADGRRERQAYEPDLGAACEAAREAFDIAT
EAATFAVDWRVGEGAPTDAIQCEGRLADLLIVGQPDRLNTDSEVARHFVETAILSSGRPVLVIPQGPLPDASTFPYSSIV
VAWNGTRESARALHDALPLLKRATQVDVVSCIPPHARRKAELSPPAYAANWLARHGVHASMVEMVLERSADIGESLLAIA
GQRRADLLVCGAYGRGLLREELLGGVTDTVLRHATIPTLFSY

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30243; Mature: 30243

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDISAIMVHVDASQSVEARLCHAVALAGSFNATLIGLLSLSADEPAWVYRTADGRRERQA
CCCEEEEEEECCCCCHHHHHHHHHHHCCCCCHHEEEEEECCCCCCEEEEECCCCCHHHHH
YEPDLGAACEAAREAFDIATEAATFAVDWRVGEGAPTDAIQCEGRLADLLIVGQPDRLNT
CCCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCEEECCCEEEEEEEECCCCCCC
DSEVARHFVETAILSSGRPVLVIPQGPLPDASTFPYSSIVVAWNGTRESARALHDALPLL
HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
KRATQVDVVSCIPPHARRKAELSPPAYAANWLARHGVHASMVEMVLERSADIGESLLAIA
HHHHHHHHEECCCCHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHC
GQRRADLLVCGAYGRGLLREELLGGVTDTVLRHATIPTLFSY
CCCCCCEEEECCCCCHHHHHHHHCCHHHHHHHHHCCHHHHCC
>Mature Secondary Structure
MDISAIMVHVDASQSVEARLCHAVALAGSFNATLIGLLSLSADEPAWVYRTADGRRERQA
CCCEEEEEEECCCCCHHHHHHHHHHHCCCCCHHEEEEEECCCCCCEEEEECCCCCHHHHH
YEPDLGAACEAAREAFDIATEAATFAVDWRVGEGAPTDAIQCEGRLADLLIVGQPDRLNT
CCCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCEEECCCEEEEEEEECCCCCCC
DSEVARHFVETAILSSGRPVLVIPQGPLPDASTFPYSSIVVAWNGTRESARALHDALPLL
HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
KRATQVDVVSCIPPHARRKAELSPPAYAANWLARHGVHASMVEMVLERSADIGESLLAIA
HHHHHHHHEECCCCHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHC
GQRRADLLVCGAYGRGLLREELLGGVTDTVLRHATIPTLFSY
CCCCCCEEEECCCCCHHHHHHHHCCHHHHHHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA