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The map label for this gene is dadA3 [H]

Identifier: 94313366

GI number: 94313366

Start: 1036975

End: 1038228

Strand: Reverse

Name: dadA3 [H]

Synonym: Rmet_4441

Alternate gene names: 94313366

Gene position: 1038228-1036975 (Counterclockwise)

Preceding gene: 94313367

Following gene: 94313365

Centisome position: 40.24

GC content: 69.14

Gene sequence:

>1254_bases
ATGCGGGTATGCGTACTGGGTGGCGGAGTGGTTGGCGTCGCGAGCGCCTACTATCTGGCGCGCGAGGGGCATACCGTTAC
CCTGCTGGAAGCGCGCGACGAACTGGCACAGGAAACCAGCCTGGCCAATGGCGCGCAACTCAGCTACAGCTACGTGGCGC
CGCTGGCCGACCCGGCCGTGCTGCCCAAGCTGCCGGGATGGCTGCTCGACCGCAACTCGCCCCTGCGTTTCGTTCCTCGC
CTTGATTGGCGCCAGTGGACCTGGTGCCTCGAGTTCCTGCGTGCCTGCCGCACCGGCGTGGCCAAGAAAGTCACCGCGCA
GTTGCTCGGGCTGGGCCAGCTCAGCCGCGATGGCGTGCATGAACTGGTCGAGCGCGAGGCGCTGCACTTCAACTATCAGC
GCAACGGCAAGCTGGTGGTGTATCGCGATCCGGTTGCCTTCGACGGCGCCCGGCGGCAACTGGAATATCAGGCCTCGCTT
GGCAGCCGCCAGCAGGCGCTGGACGCCGCGGCCTGCGTGGCGCTCGAACCGGCCTTAGCATCGGTGCAGCACAAGCTGGC
CGGCGGCATCCACACCCCTAGCGAGGAAGCTGGTGACTGCCATGCTTTCACCGTTGGCCTGGCCGCGGCCGCCACGCGCC
GTTTCGGCGCGAGCTTCCGCTGCGGTACGCGGGTGACGGGGCTGCGGCACGCAGGGCGACGCGTGGTGGCCGCGCGCACC
GATGCGGGTGACATCGAGGCCGATGCCTTCGTGGTCGCTGCCGGCATGCAAAGCGTGCCGATGCTGGCGCCGCTTGGCGT
GACGTTGCCACTGTATCCGCTGACCGGCTACAGCCTGACCGCGCCGACGCAACCGGGCCACCATCATCCCCCTGCCATCA
GCGTGACGGACCTGCACTACAAGGTGGTCTACGCCCGTCTGGGCGAGCGGTTGCGCATCGCCGGCATGGTTGACCTGATT
GGCCGCCATCCGCGTGCCGATGCACGTCGCGTCGCCCTGCTGGCCCGGCAGGCGCGCGAAACCTTCCCGGACGGCGCAAA
CTTCGACGCGGCAACCTCGTGGTGCGGCGGCCGTCCTGCCACGCCCGACAGCAAGCCGCTGATCGGCGCCACGCCGTACG
ACAACCTGTGGCTCAACACCGGTCATGGCGCGTTGGGCTTCACGCTGGCCTGCGGCAGCGCCGCGCTGCTCGCCGACGCC
ATGGCCGGCCGCCCCTCGTCGCTGGATGCATCGGCGTTCGCGCTGATGCGCTAA

Upstream 100 bases:

>100_bases
TGCGCTAAAGGTCATTTGAACCCTACCCCGCTCTCGTCAACACTGTCGCCTTGCCCGCAGTTGCGGGCGGCAGGTCATTT
TCAAGGTTGGGGAGAGAAAC

Downstream 100 bases:

>100_bases
TGCGCTGACGCGCTGATGCCGGGCCAACATCGCTTCCCCTCACACCGATACCCGCAACACACCATGAAACAGATCATCGA
TACCGGCCTGCCTCGATCCG

Product: D-amino acid dehydrogenase 2 small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MRVCVLGGGVVGVASAYYLAREGHTVTLLEARDELAQETSLANGAQLSYSYVAPLADPAVLPKLPGWLLDRNSPLRFVPR
LDWRQWTWCLEFLRACRTGVAKKVTAQLLGLGQLSRDGVHELVEREALHFNYQRNGKLVVYRDPVAFDGARRQLEYQASL
GSRQQALDAAACVALEPALASVQHKLAGGIHTPSEEAGDCHAFTVGLAAAATRRFGASFRCGTRVTGLRHAGRRVVAART
DAGDIEADAFVVAAGMQSVPMLAPLGVTLPLYPLTGYSLTAPTQPGHHHPPAISVTDLHYKVVYARLGERLRIAGMVDLI
GRHPRADARRVALLARQARETFPDGANFDAATSWCGGRPATPDSKPLIGATPYDNLWLNTGHGALGFTLACGSAALLADA
MAGRPSSLDASAFALMR

Sequences:

>Translated_417_residues
MRVCVLGGGVVGVASAYYLAREGHTVTLLEARDELAQETSLANGAQLSYSYVAPLADPAVLPKLPGWLLDRNSPLRFVPR
LDWRQWTWCLEFLRACRTGVAKKVTAQLLGLGQLSRDGVHELVEREALHFNYQRNGKLVVYRDPVAFDGARRQLEYQASL
GSRQQALDAAACVALEPALASVQHKLAGGIHTPSEEAGDCHAFTVGLAAAATRRFGASFRCGTRVTGLRHAGRRVVAART
DAGDIEADAFVVAAGMQSVPMLAPLGVTLPLYPLTGYSLTAPTQPGHHHPPAISVTDLHYKVVYARLGERLRIAGMVDLI
GRHPRADARRVALLARQARETFPDGANFDAATSWCGGRPATPDSKPLIGATPYDNLWLNTGHGALGFTLACGSAALLADA
MAGRPSSLDASAFALMR
>Mature_417_residues
MRVCVLGGGVVGVASAYYLAREGHTVTLLEARDELAQETSLANGAQLSYSYVAPLADPAVLPKLPGWLLDRNSPLRFVPR
LDWRQWTWCLEFLRACRTGVAKKVTAQLLGLGQLSRDGVHELVEREALHFNYQRNGKLVVYRDPVAFDGARRQLEYQASL
GSRQQALDAAACVALEPALASVQHKLAGGIHTPSEEAGDCHAFTVGLAAAATRRFGASFRCGTRVTGLRHAGRRVVAART
DAGDIEADAFVVAAGMQSVPMLAPLGVTLPLYPLTGYSLTAPTQPGHHHPPAISVTDLHYKVVYARLGERLRIAGMVDLI
GRHPRADARRVALLARQARETFPDGANFDAATSWCGGRPATPDSKPLIGATPYDNLWLNTGHGALGFTLACGSAALLADA
MAGRPSSLDASAFALMR

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=419, Percent_Identity=37.708830548926, Blast_Score=275, Evalue=5e-75,
Organism=Drosophila melanogaster, GI20130091, Length=433, Percent_Identity=25.1732101616628, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 44600; Mature: 44600

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS00104 EPSP_SYNTHASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVCVLGGGVVGVASAYYLAREGHTVTLLEARDELAQETSLANGAQLSYSYVAPLADPAV
CEEEEECCCHHHHHHHHHEECCCCEEEEEHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC
LPKLPGWLLDRNSPLRFVPRLDWRQWTWCLEFLRACRTGVAKKVTAQLLGLGQLSRDGVH
CCCCCCCEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ELVEREALHFNYQRNGKLVVYRDPVAFDGARRQLEYQASLGSRQQALDAAACVALEPALA
HHHHHHHHEEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
SVQHKLAGGIHTPSEEAGDCHAFTVGLAAAATRRFGASFRCGTRVTGLRHAGRRVVAART
HHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEEEEEC
DAGDIEADAFVVAAGMQSVPMLAPLGVTLPLYPLTGYSLTAPTQPGHHHPPAISVTDLHY
CCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCEEEEEHHHH
KVVYARLGERLRIAGMVDLIGRHPRADARRVALLARQARETFPDGANFDAATSWCGGRPA
HHHHHHHCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCC
TPDSKPLIGATPYDNLWLNTGHGALGFTLACGSAALLADAMAGRPSSLDASAFALMR
CCCCCCEECCCCCCCCEEECCCCCCEEEECCCCHHHHHHHHCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MRVCVLGGGVVGVASAYYLAREGHTVTLLEARDELAQETSLANGAQLSYSYVAPLADPAV
CEEEEECCCHHHHHHHHHEECCCCEEEEEHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC
LPKLPGWLLDRNSPLRFVPRLDWRQWTWCLEFLRACRTGVAKKVTAQLLGLGQLSRDGVH
CCCCCCCEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ELVEREALHFNYQRNGKLVVYRDPVAFDGARRQLEYQASLGSRQQALDAAACVALEPALA
HHHHHHHHEEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
SVQHKLAGGIHTPSEEAGDCHAFTVGLAAAATRRFGASFRCGTRVTGLRHAGRRVVAART
HHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEEEEEC
DAGDIEADAFVVAAGMQSVPMLAPLGVTLPLYPLTGYSLTAPTQPGHHHPPAISVTDLHY
CCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCEEEEEHHHH
KVVYARLGERLRIAGMVDLIGRHPRADARRVALLARQARETFPDGANFDAATSWCGGRPA
HHHHHHHCCCEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCC
TPDSKPLIGATPYDNLWLNTGHGALGFTLACGSAALLADAMAGRPSSLDASAFALMR
CCCCCCEECCCCCCCCEEECCCCCCEEEECCCCHHHHHHHHCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]