Click here to switch to the map view.

The map label for this gene is yfiQ [C]

Identifier: 94313287

GI number: 94313287

Start: 958937

End: 961066

Strand: Direct

Name: yfiQ [C]

Synonym: Rmet_4362

Alternate gene names: 94313287

Gene position: 958937-961066 (Clockwise)

Preceding gene: 94313286

Following gene: 94313288

Centisome position: 37.17

GC content: 63.94

Gene sequence:

>2130_bases
ATGGCACATGACAAGGATGCTGTACGCAAGATTCTCGCAATCGCCAAGAAGGAAGGCCGCAATGCGCTGACCGCCCCCGA
AGGCAAGCTGGTTTGCGATGCCTATGGCATCTCTGTGCCAGGGGAGGGCGTCGCCAGGTCGCCCACGGGCGCGGTGGAAC
TGGCCAGCAAGATGGGATACCCGGTGGTGCTCAAGATCGTGTCGCCGGACATCCTGCACAAGACCGAAGCCGGTGGTGTG
CTGGTGGGTGTGAACTCGGCCGCCGACGTGGAGCGCGGCTATCTGACGATCGTCGAGAACGCGAAGAAGTACAACGCGAA
TGCGCAGATCGTTGGCGTGCAGGTCCAGCAGATGATTGGCGGCGGGCAGGAGGTGATCATCGGCGCGGTGACCGACCCGT
CGTTCGGCAAGCTGGTGGCATTCGGCCTGGGCGGCGTGCTGGTGGAGGTGCTCAAGGATGTGACGTTCCGCATGGCGCCG
GCCACCTATGACGATGCGCTGTCGATGCTCGATGGCATCGCCGCGGCGGACGTGCTCAAGGGCGTGCGCGGCGCGGACCC
GGCCAATCGCGAGGCGCTGGCCGGGATGATCCAGCGCGTGTCCGAACTCGTGAGCGATTTCCCCGAGATCTCCGAGCTTG
ACCTGAATCCGGTGTTCGCCAGCAAGGACGGCGCGATTGCCGCCGACGTGCGCATCGTGATCGACGACTCGCCGCAGCCG
GAGAAATACCGGCCGAGCCAGGAAGAGATCGTGCGGCAGATGAACCGGATTATGCGGCCCGACACGGTGGCGGTGATCGG
CGCATCGGCCGAGGACGGCAAGATCGGCAACTCGGTCATGAAGAACCTGATCAATGGCGGCTATCAGGGCAAGATCTACC
CGATCCACCCGAAGGCCGACGAGATCATGGGCATGACGGCCTACAAGAGCGTGCTCGACGTGCCGGGCGATGTCGATGTG
GCGGTCTTCGCTATCCCGGCCAAGTTCGTCGCGCAGGCATTGGAGGAGGTCGGCAAGAAGGGTATTCCGGGTGCGGTGTT
GATTCCGTCCGGATTCGCCGAGACCGGCAATGTGGAGGGCCAGGAGGAGATTGTCGCCATCGCCCGCAAACACAATATCC
GGCTGATGGGGCCGAACATCTACGGCTTCTACTACACACCGAAGAACTTGTGCGCGACGTTCTGCACGCCATACGACGTC
AAGGGCAAGGCTGCGCTGTCGTCGCAGTCGGGCGGTATTGGCATGGCGATCATCGGGTTCTCGCGCTCGGCCAAGATGGG
GGTGTCCGCGATTGTCGGGCTCGGCAACAAGTCCGATATCGACGAGGACGATCTGCTCACGTTCTTCGAGCAGGACGACA
ACACCGAGATCATCGCCCAGCACTGCGAGGACCTGAAGGATGGCCGGTCGTTCGCCGAAGTGGCACGTCGCGTCTCGAAG
AAGAAGCCGGTGGTGGTGCTGAAGGCAGGCCGCACCAGCCTTGGCGCGCGCGCCGCAAGCTCGCACACGGGCGCGCTGGC
AGGCAATGACAAGATCTACGAGGACGTCTTCAAGCAAGCAGGCGTGATCCGCGCCCGCTCGCTGCGCGACTTGCTCGAGT
TCGCGCGCGGCATTCCAAAGCTGCCGACGCCGACGGGCGAGAACGTGGTCATCATCACCGGCGCGGGTGGCTCGGGCGTG
CTGCTGTCCGATGCGTGCGTGGACAACGGACTGTCGCTGATGACGATGCCCGATGACCTGGACGCGGCGTTCCGCAAGTT
CATCCCGCCGTTCGGCGCGGCCGGCAATCCGGTGGACATCACCGGCGGCGAGCCGCCCTCCACGTACAAGAACACGATCA
AGCTCGGCCTGGAAGATCCGCGTATCCACGCGATCATCCTGGGCTACTGGCACACGATCATCACGCCGCCGATGGTCTTT
GCCAAGCTCGTGGTCGAGGTGAAGGAAGAAATGCGCGCGAAGGGCATCGAGAAGCCGATCGTCGCGTCTCTGGCCGGTGA
CGTGCAGGTCGAGGAGGCTGCGGAGTACCTGTACGAGCACGGCGTGCCGGCCTATGCGTACTCGACGGAGATTCCGGTGG
CGGTGCTCGGCGCAAAGTACAAGTGGGCGCGAGGGGCGGGCAAGATCTGA

Upstream 100 bases:

>100_bases
CCAATGCGTGGCGGGTGGGCCTGCTTTCGCCCTGCGCAGCCCATCCGGGCCGCGTTTTTCGCCTGCCCCTCATTCATGCC
TGAACAGATGGAGACCTGAC

Downstream 100 bases:

>100_bases
CGCGTTCGGTTGTTCGGTCGTTCGTACGGCTGCCTCTTTCCCTCTCGCGCTGGCGTGAGAGGGAAAGAGGGCCAGCGCTT
CCATTGCCAAGGCCCTCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 709; Mature: 708

Protein sequence:

>709_residues
MAHDKDAVRKILAIAKKEGRNALTAPEGKLVCDAYGISVPGEGVARSPTGAVELASKMGYPVVLKIVSPDILHKTEAGGV
LVGVNSAADVERGYLTIVENAKKYNANAQIVGVQVQQMIGGGQEVIIGAVTDPSFGKLVAFGLGGVLVEVLKDVTFRMAP
ATYDDALSMLDGIAAADVLKGVRGADPANREALAGMIQRVSELVSDFPEISELDLNPVFASKDGAIAADVRIVIDDSPQP
EKYRPSQEEIVRQMNRIMRPDTVAVIGASAEDGKIGNSVMKNLINGGYQGKIYPIHPKADEIMGMTAYKSVLDVPGDVDV
AVFAIPAKFVAQALEEVGKKGIPGAVLIPSGFAETGNVEGQEEIVAIARKHNIRLMGPNIYGFYYTPKNLCATFCTPYDV
KGKAALSSQSGGIGMAIIGFSRSAKMGVSAIVGLGNKSDIDEDDLLTFFEQDDNTEIIAQHCEDLKDGRSFAEVARRVSK
KKPVVVLKAGRTSLGARAASSHTGALAGNDKIYEDVFKQAGVIRARSLRDLLEFARGIPKLPTPTGENVVIITGAGGSGV
LLSDACVDNGLSLMTMPDDLDAAFRKFIPPFGAAGNPVDITGGEPPSTYKNTIKLGLEDPRIHAIILGYWHTIITPPMVF
AKLVVEVKEEMRAKGIEKPIVASLAGDVQVEEAAEYLYEHGVPAYAYSTEIPVAVLGAKYKWARGAGKI

Sequences:

>Translated_709_residues
MAHDKDAVRKILAIAKKEGRNALTAPEGKLVCDAYGISVPGEGVARSPTGAVELASKMGYPVVLKIVSPDILHKTEAGGV
LVGVNSAADVERGYLTIVENAKKYNANAQIVGVQVQQMIGGGQEVIIGAVTDPSFGKLVAFGLGGVLVEVLKDVTFRMAP
ATYDDALSMLDGIAAADVLKGVRGADPANREALAGMIQRVSELVSDFPEISELDLNPVFASKDGAIAADVRIVIDDSPQP
EKYRPSQEEIVRQMNRIMRPDTVAVIGASAEDGKIGNSVMKNLINGGYQGKIYPIHPKADEIMGMTAYKSVLDVPGDVDV
AVFAIPAKFVAQALEEVGKKGIPGAVLIPSGFAETGNVEGQEEIVAIARKHNIRLMGPNIYGFYYTPKNLCATFCTPYDV
KGKAALSSQSGGIGMAIIGFSRSAKMGVSAIVGLGNKSDIDEDDLLTFFEQDDNTEIIAQHCEDLKDGRSFAEVARRVSK
KKPVVVLKAGRTSLGARAASSHTGALAGNDKIYEDVFKQAGVIRARSLRDLLEFARGIPKLPTPTGENVVIITGAGGSGV
LLSDACVDNGLSLMTMPDDLDAAFRKFIPPFGAAGNPVDITGGEPPSTYKNTIKLGLEDPRIHAIILGYWHTIITPPMVF
AKLVVEVKEEMRAKGIEKPIVASLAGDVQVEEAAEYLYEHGVPAYAYSTEIPVAVLGAKYKWARGAGKI
>Mature_708_residues
AHDKDAVRKILAIAKKEGRNALTAPEGKLVCDAYGISVPGEGVARSPTGAVELASKMGYPVVLKIVSPDILHKTEAGGVL
VGVNSAADVERGYLTIVENAKKYNANAQIVGVQVQQMIGGGQEVIIGAVTDPSFGKLVAFGLGGVLVEVLKDVTFRMAPA
TYDDALSMLDGIAAADVLKGVRGADPANREALAGMIQRVSELVSDFPEISELDLNPVFASKDGAIAADVRIVIDDSPQPE
KYRPSQEEIVRQMNRIMRPDTVAVIGASAEDGKIGNSVMKNLINGGYQGKIYPIHPKADEIMGMTAYKSVLDVPGDVDVA
VFAIPAKFVAQALEEVGKKGIPGAVLIPSGFAETGNVEGQEEIVAIARKHNIRLMGPNIYGFYYTPKNLCATFCTPYDVK
GKAALSSQSGGIGMAIIGFSRSAKMGVSAIVGLGNKSDIDEDDLLTFFEQDDNTEIIAQHCEDLKDGRSFAEVARRVSKK
KPVVVLKAGRTSLGARAASSHTGALAGNDKIYEDVFKQAGVIRARSLRDLLEFARGIPKLPTPTGENVVIITGAGGSGVL
LSDACVDNGLSLMTMPDDLDAAFRKFIPPFGAAGNPVDITGGEPPSTYKNTIKLGLEDPRIHAIILGYWHTIITPPMVFA
KLVVEVKEEMRAKGIEKPIVASLAGDVQVEEAAEYLYEHGVPAYAYSTEIPVAVLGAKYKWARGAGKI

Specific function: Unknown

COG id: COG1042

COG function: function code C; Acyl-CoA synthetase (NDP forming)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfiQ [H]

Homologues:

Organism=Escherichia coli, GI1788938, Length=436, Percent_Identity=28.4403669724771, Blast_Score=197, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014089
- InterPro:   IPR013650
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR005809
- InterPro:   IPR016102 [H]

Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]

EC number: NA

Molecular weight: Translated: 75113; Mature: 74982

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHDKDAVRKILAIAKKEGRNALTAPEGKLVCDAYGISVPGEGVARSPTGAVELASKMGY
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCC
PVVLKIVSPDILHKTEAGGVLVGVNSAADVERGYLTIVENAKKYNANAQIVGVQVQQMIG
CEEEEECCCHHHHCCCCCCEEEECCCCCCCCCCEEEEEECCHHCCCCCEEEEEEHHHHHC
GGQEVIIGAVTDPSFGKLVAFGLGGVLVEVLKDVTFRMAPATYDDALSMLDGIAAADVLK
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHH
GVRGADPANREALAGMIQRVSELVSDFPEISELDLNPVFASKDGAIAADVRIVIDDSPQP
HCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEECCCCCEEEEEEEEECCCCCC
EKYRPSQEEIVRQMNRIMRPDTVAVIGASAEDGKIGNSVMKNLINGGYQGKIYPIHPKAD
CCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCHH
EIMGMTAYKSVLDVPGDVDVAVFAIPAKFVAQALEEVGKKGIPGAVLIPSGFAETGNVEG
HHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCC
QEEIVAIARKHNIRLMGPNIYGFYYTPKNLCATFCTPYDVKGKAALSSQSGGIGMAIIGF
HHHHHHHHHHCCEEEECCCEEEEEECHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEEEC
SRSAKMGVSAIVGLGNKSDIDEDDLLTFFEQDDNTEIIAQHCEDLKDGRSFAEVARRVSK
CCCCCCCCHHEEECCCCCCCCHHHHEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHC
KKPVVVLKAGRTSLGARAASSHTGALAGNDKIYEDVFKQAGVIRARSLRDLLEFARGIPK
CCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
LPTPTGENVVIITGAGGSGVLLSDACVDNGLSLMTMPDDLDAAFRKFIPPFGAAGNPVDI
CCCCCCCCEEEEEECCCCCEEEEHHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCCEEC
TGGEPPSTYKNTIKLGLEDPRIHAIILGYWHTIITPPMVFAKLVVEVKEEMRAKGIEKPI
CCCCCCCCCCHHEEECCCCCCEEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCH
VASLAGDVQVEEAAEYLYEHGVPAYAYSTEIPVAVLGAKYKWARGAGKI
HHHHHCCCCHHHHHHHHHHCCCCCEEECCCCCEEEECCCEEECCCCCCC
>Mature Secondary Structure 
AHDKDAVRKILAIAKKEGRNALTAPEGKLVCDAYGISVPGEGVARSPTGAVELASKMGY
CCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCC
PVVLKIVSPDILHKTEAGGVLVGVNSAADVERGYLTIVENAKKYNANAQIVGVQVQQMIG
CEEEEECCCHHHHCCCCCCEEEECCCCCCCCCCEEEEEECCHHCCCCCEEEEEEHHHHHC
GGQEVIIGAVTDPSFGKLVAFGLGGVLVEVLKDVTFRMAPATYDDALSMLDGIAAADVLK
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHH
GVRGADPANREALAGMIQRVSELVSDFPEISELDLNPVFASKDGAIAADVRIVIDDSPQP
HCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEECCCCCEEEEEEEEECCCCCC
EKYRPSQEEIVRQMNRIMRPDTVAVIGASAEDGKIGNSVMKNLINGGYQGKIYPIHPKAD
CCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCHH
EIMGMTAYKSVLDVPGDVDVAVFAIPAKFVAQALEEVGKKGIPGAVLIPSGFAETGNVEG
HHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCC
QEEIVAIARKHNIRLMGPNIYGFYYTPKNLCATFCTPYDVKGKAALSSQSGGIGMAIIGF
HHHHHHHHHHCCEEEECCCEEEEEECHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEEEC
SRSAKMGVSAIVGLGNKSDIDEDDLLTFFEQDDNTEIIAQHCEDLKDGRSFAEVARRVSK
CCCCCCCCHHEEECCCCCCCCHHHHEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHC
KKPVVVLKAGRTSLGARAASSHTGALAGNDKIYEDVFKQAGVIRARSLRDLLEFARGIPK
CCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
LPTPTGENVVIITGAGGSGVLLSDACVDNGLSLMTMPDDLDAAFRKFIPPFGAAGNPVDI
CCCCCCCCEEEEEECCCCCEEEEHHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCCEEC
TGGEPPSTYKNTIKLGLEDPRIHAIILGYWHTIITPPMVFAKLVVEVKEEMRAKGIEKPI
CCCCCCCCCCHHEEECCCCCCEEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCH
VASLAGDVQVEEAAEYLYEHGVPAYAYSTEIPVAVLGAKYKWARGAGKI
HHHHHCCCCHHHHHHHHHHCCCCCEEECCCCCEEEECCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]