| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is 94313251
Identifier: 94313251
GI number: 94313251
Start: 920602
End: 921177
Strand: Direct
Name: 94313251
Synonym: Rmet_4326
Alternate gene names: NA
Gene position: 920602-921177 (Clockwise)
Preceding gene: 94313250
Following gene: 94313254
Centisome position: 35.68
GC content: 57.64
Gene sequence:
>576_bases ATGAGCAGGAAGTCATGGCATTTCGTTCTGCTGATTCTCCTGATTCCGGCGCTGCCCCCGCTCCGTGACGTCGTCGAGGC ATCGATGTCTTCGCTGATGTTGTGTCTGCTGCCATGTCTGGCCGCGGCGGGTTGGGCCTTCGCCGAGCTATATGTCATAA GTCGCCGGAGCCTAATGGACGCGATGCGGCCCTACGGACTCGCTCTCTGTACCCTGTGCACATTTTCATATGGCGTCTGG ATGGTGCCCATTGCCATTGACCTGTCCAGAATGTCGATGGCTACGGGCATTGCGCGCGATGCTTCGGTGTGCGTGGCGGG ATTTTCGATGGCGCTTGCAATCCGCATTTCGCCGTGGCCCGTTTTACTCTTCTTCATTGGCAACTTGGTCTGGATGGGCG TGACAGTTGGATTGATCTTCGTTGAAGAGCCGGTGCGACTCTGCGCGAACTATCTGCTCGGAGACCAACATCAGGCCGGA GCTGGCATCGTCGCTTACTCGGCCGGCGCAGGACTATGGTTGCTTGGATGGGTTTTTCGCAAGGCGGGTCTTGCGGATCT GTCATCGGACATCTAG
Upstream 100 bases:
>100_bases ACGTGGTTTCCGCGAATGGTGTGGTTTTGGCCACGTATCCAATGGAGCAATTTCAACAGGCGTATTTGTTTGCACGAAGC GTCGTGCGTCAGGCGGCGCG
Downstream 100 bases:
>100_bases CTCGCTTCACTCCACATCACCGCCGTCGATCTGCAGGACGGTGCCGGTTGCGAAGCCGTTGGCAATCAGGAAGCGGCCCG CCTGGGCGAGTTCCGATGCA
Product: transmembrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MSRKSWHFVLLILLIPALPPLRDVVEASMSSLMLCLLPCLAAAGWAFAELYVISRRSLMDAMRPYGLALCTLCTFSYGVW MVPIAIDLSRMSMATGIARDASVCVAGFSMALAIRISPWPVLLFFIGNLVWMGVTVGLIFVEEPVRLCANYLLGDQHQAG AGIVAYSAGAGLWLLGWVFRKAGLADLSSDI
Sequences:
>Translated_191_residues MSRKSWHFVLLILLIPALPPLRDVVEASMSSLMLCLLPCLAAAGWAFAELYVISRRSLMDAMRPYGLALCTLCTFSYGVW MVPIAIDLSRMSMATGIARDASVCVAGFSMALAIRISPWPVLLFFIGNLVWMGVTVGLIFVEEPVRLCANYLLGDQHQAG AGIVAYSAGAGLWLLGWVFRKAGLADLSSDI >Mature_190_residues SRKSWHFVLLILLIPALPPLRDVVEASMSSLMLCLLPCLAAAGWAFAELYVISRRSLMDAMRPYGLALCTLCTFSYGVWM VPIAIDLSRMSMATGIARDASVCVAGFSMALAIRISPWPVLLFFIGNLVWMGVTVGLIFVEEPVRLCANYLLGDQHQAGA GIVAYSAGAGLWLLGWVFRKAGLADLSSDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20717; Mature: 20586
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKSWHFVLLILLIPALPPLRDVVEASMSSLMLCLLPCLAAAGWAFAELYVISRRSLMD CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMRPYGLALCTLCTFSYGVWMVPIAIDLSRMSMATGIARDASVCVAGFSMALAIRISPWP HHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHH VLLFFIGNLVWMGVTVGLIFVEEPVRLCANYLLGDQHQAGAGIVAYSAGAGLWLLGWVFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHH KAGLADLSSDI HCCHHHHCCCC >Mature Secondary Structure SRKSWHFVLLILLIPALPPLRDVVEASMSSLMLCLLPCLAAAGWAFAELYVISRRSLMD CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMRPYGLALCTLCTFSYGVWMVPIAIDLSRMSMATGIARDASVCVAGFSMALAIRISPWP HHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHH VLLFFIGNLVWMGVTVGLIFVEEPVRLCANYLLGDQHQAGAGIVAYSAGAGLWLLGWVFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHH KAGLADLSSDI HCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA