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The map label for this gene is 94313250

Identifier: 94313250

GI number: 94313250

Start: 920057

End: 920605

Strand: Direct

Name: 94313250

Synonym: Rmet_4325

Alternate gene names: NA

Gene position: 920057-920605 (Clockwise)

Preceding gene: 94313249

Following gene: 94313251

Centisome position: 35.66

GC content: 58.83

Gene sequence:

>549_bases
TTGTCGGCCTGGACACTGGACGAGCGGCGTGACCTGCGGATCGCGTCGCTGGATCTTCGAATGCCAGCGACTGCAGTGCG
GAACCAGCAAGGGCATGGTGTGCAACTGTTTTCCGGAAACGCGACGTCGACGGTGTACATCGTGGATTTCATCTACACAC
GCTGCAATACCGTATGTAGCGCGCTGGGCGGCGAGTTCGCGCAGTTGTCTCACCAGGTCAAGGCCGATGGCTTGTCAGGT
CAACTTGGTCTTGTTTCGATCTCACTCGACGCGCGCGATACGGCTGGCGACTTGAAAACGTACGCAGCAACGTATCGGGC
GAGCTTGCCAGAGTGGGAGGTGGTCACCGCAAGCGATTCGCGCGAACTGAACGCGTTGCTACGCCAGGCGGATGTGATAG
CGATCCCGGATGGGATGGGCGGCATCACGCATAACGGGGCACTCGACGTGGTTTCCGCGAATGGTGTGGTTTTGGCCACG
TATCCAATGGAGCAATTTCAACAGGCGTATTTGTTTGCACGAAGCGTCGTGCGTCAGGCGGCGCGATGA

Upstream 100 bases:

>100_bases
GGCGACGCCGCGCTTGGCGGGTCCGGCGGCTAGGCCGTGGCTGGCGCTTGCCGCCGTACTGGCGGCGGGCATCGGCGGGC
TGCACGCGCTGACCTACGGG

Downstream 100 bases:

>100_bases
GCAGGAAGTCATGGCATTTCGTTCTGCTGATTCTCCTGATTCCGGCGCTGCCCCCGCTCCGTGACGTCGTCGAGGCATCG
ATGTCTTCGCTGATGTTGTG

Product: SCO1/SenC/PrrC protein

Products: NA

Alternate protein names: SCO1/SenC; Sco1/SenC Family Protein; SCO1/SenC Family Protein

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MSAWTLDERRDLRIASLDLRMPATAVRNQQGHGVQLFSGNATSTVYIVDFIYTRCNTVCSALGGEFAQLSHQVKADGLSG
QLGLVSISLDARDTAGDLKTYAATYRASLPEWEVVTASDSRELNALLRQADVIAIPDGMGGITHNGALDVVSANGVVLAT
YPMEQFQQAYLFARSVVRQAAR

Sequences:

>Translated_182_residues
MSAWTLDERRDLRIASLDLRMPATAVRNQQGHGVQLFSGNATSTVYIVDFIYTRCNTVCSALGGEFAQLSHQVKADGLSG
QLGLVSISLDARDTAGDLKTYAATYRASLPEWEVVTASDSRELNALLRQADVIAIPDGMGGITHNGALDVVSANGVVLAT
YPMEQFQQAYLFARSVVRQAAR
>Mature_181_residues
SAWTLDERRDLRIASLDLRMPATAVRNQQGHGVQLFSGNATSTVYIVDFIYTRCNTVCSALGGEFAQLSHQVKADGLSGQ
LGLVSISLDARDTAGDLKTYAATYRASLPEWEVVTASDSRELNALLRQADVIAIPDGMGGITHNGALDVVSANGVVLATY
PMEQFQQAYLFARSVVRQAAR

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19638; Mature: 19507

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAWTLDERRDLRIASLDLRMPATAVRNQQGHGVQLFSGNATSTVYIVDFIYTRCNTVCS
CCCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHH
ALGGEFAQLSHQVKADGLSGQLGLVSISLDARDTAGDLKTYAATYRASLPEWEVVTASDS
HHCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCC
RELNALLRQADVIAIPDGMGGITHNGALDVVSANGVVLATYPMEQFQQAYLFARSVVRQA
HHHHHHHHHCCEEEECCCCCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHH
AR
CC
>Mature Secondary Structure 
SAWTLDERRDLRIASLDLRMPATAVRNQQGHGVQLFSGNATSTVYIVDFIYTRCNTVCS
CCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHH
ALGGEFAQLSHQVKADGLSGQLGLVSISLDARDTAGDLKTYAATYRASLPEWEVVTASDS
HHCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCC
RELNALLRQADVIAIPDGMGGITHNGALDVVSANGVVLATYPMEQFQQAYLFARSVVRQA
HHHHHHHHHCCEEEECCCCCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHH
AR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA