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The map label for this gene is 94313254

Identifier: 94313254

GI number: 94313254

Start: 922709

End: 923152

Strand: Direct

Name: 94313254

Synonym: Rmet_4329

Alternate gene names: NA

Gene position: 922709-923152 (Clockwise)

Preceding gene: 94313251

Following gene: 94313255

Centisome position: 35.76

GC content: 57.88

Gene sequence:

>444_bases
ATGCGATTCGACACCCGATTGGCCCGACTCCTGCACGTTCTGGTGCACATGCATCTACGCGGTGGTTCAACCACGTCTGA
GAACATTGCATTGATGCTGCACACCAACCCAGTTGTGGTTCGAAGAACGATGGCGGCGCTGCGCGATGCAGGTTACGTCC
AATCCACGGGTGGACGAGGGGGCGGATGGGACCTTGCGAGAGACCTTGAGGACTTCACGGTAAAGGATGTCTACGTGGCG
ATTGCACACACCGCGCTTTTCGCACTCGGCCCTGCTGACGACAACCCGGCATGCCCGGTAGAGGCTGCGGTGAATCGCCA
CATCAATGAGGCACTGAGTTCTGCGGAGATGACGATGCTTCGGTTTTTTGGAGAGAAGCGCCTGGCCGAAATCGCCCGAG
ATGCTACCTCGTCGATATCAGGGAAACCCAGTGGCCAGGTCTAA

Upstream 100 bases:

>100_bases
GACGGTAGGCGCTCATCGTGGCTCGGAATCATGGTCGTTTACAGCACGCATTGCATTAGCGTAACATCAAACATTACGGA
AACTCAATAGTTCTGCTTTC

Downstream 100 bases:

>100_bases
GACCGCGTGAATTGACTGCCGCCAGAGCAATTGCCATGACCGCGCCGGAATTGCGTCCTTGCCACGCTCGATCTGTGCGG
ATGCCTGCGGTGAGAGCAGT

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator BadM/Rrf2 Family; Rrf2 Family Protein; Transcriptional Regulator; Transcriptional Regulator Badm/Rrf2 Family; Rrf2 Family Transcriptional Regulator; Transcriptional Regulator Family; Transcriptional Regulator Superfamily; HTH Domain-Containing; Transcriptional Regulator Rrf2 Family; Transcription Regulator Protein; HTH-Type Transcriptional Regulator YwnA; Rf2 Family Transcriptional Regulator; Transcriptional Regulator Family Protein

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MRFDTRLARLLHVLVHMHLRGGSTTSENIALMLHTNPVVVRRTMAALRDAGYVQSTGGRGGGWDLARDLEDFTVKDVYVA
IAHTALFALGPADDNPACPVEAAVNRHINEALSSAEMTMLRFFGEKRLAEIARDATSSISGKPSGQV

Sequences:

>Translated_147_residues
MRFDTRLARLLHVLVHMHLRGGSTTSENIALMLHTNPVVVRRTMAALRDAGYVQSTGGRGGGWDLARDLEDFTVKDVYVA
IAHTALFALGPADDNPACPVEAAVNRHINEALSSAEMTMLRFFGEKRLAEIARDATSSISGKPSGQV
>Mature_147_residues
MRFDTRLARLLHVLVHMHLRGGSTTSENIALMLHTNPVVVRRTMAALRDAGYVQSTGGRGGGWDLARDLEDFTVKDVYVA
IAHTALFALGPADDNPACPVEAAVNRHINEALSSAEMTMLRFFGEKRLAEIARDATSSISGKPSGQV

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15929; Mature: 15929

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFDTRLARLLHVLVHMHLRGGSTTSENIALMLHTNPVVVRRTMAALRDAGYVQSTGGRG
CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEECCCCCC
GGWDLARDLEDFTVKDVYVAIAHTALFALGPADDNPACPVEAAVNRHINEALSSAEMTML
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RFFGEKRLAEIARDATSSISGKPSGQV
HHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRFDTRLARLLHVLVHMHLRGGSTTSENIALMLHTNPVVVRRTMAALRDAGYVQSTGGRG
CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEECCCCCC
GGWDLARDLEDFTVKDVYVAIAHTALFALGPADDNPACPVEAAVNRHINEALSSAEMTML
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RFFGEKRLAEIARDATSSISGKPSGQV
HHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA