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The map label for this gene is ccoP [H]

Identifier: 94313249

GI number: 94313249

Start: 919381

End: 919989

Strand: Direct

Name: ccoP [H]

Synonym: Rmet_4324

Alternate gene names: 94313249

Gene position: 919381-919989 (Clockwise)

Preceding gene: 94313248

Following gene: 94313250

Centisome position: 35.63

GC content: 64.2

Gene sequence:

>609_bases
ATGACCGATGTTCGGGAAACACGGCAGGCCGAGGCGGCGCGTGCGCGCGAGCATGAAGACCCGCATGAGAATCAGGCGCC
CATTCCGCGCTATGTGCTGGCAATGGTTGCCGTTCTGGTGGCATGGGGGGCGTGGTACATCGCCACGGCTCCAATCAATC
AGGCGCCTGAACTGGGCGATCGCCGCACGCTGGCGGACCTGCGCGGCAATGCGAAGGGCGCTGGAGCGAAGGTCGACGGC
GCCGCAATCTTTCAGAGCCGCTGCGTGGCTTGCCACCAATCCAATGGACAAGGCTTGCCCGGCGTCTTTCCGCCCCTGGC
CGGATCGGAATGGGTCAACGGTAACGAGTCCCGTGTCGCACGGATTGTATTGCGAGGCGTGACCGGCAAGCTGACCGTCA
AGGGCGCGGTCTATAACGGGGCGATGCCGGCATTTGCCGACCAGCTTACCGATGCCGAGATCGCGGCCGTACTGACACAT
GTACGCGTCCAGTGGGGAAATAGTGCTTCGGCAATTTCGGCGGAAGCCGTTGCGGCATCGCGTGCCGACACTGCCGGAAT
GAAAGGATCCTTCGATGGCGACGCCGCGCTTGGCGGGTCCGGCGGCTAG

Upstream 100 bases:

>100_bases
GGCGCTGGATCTTGTGGCATACCTGCAGTCACTGAACCGGACCGGGCCCGTATTGCCACCGATCAATGGCGCTGCGGCGC
GCTGAAGGCAGGAGACTGCA

Downstream 100 bases:

>100_bases
GCCGTGGCTGGCGCTTGCCGCCGTACTGGCGGCGGGCATCGGCGGGCTGCACGCGCTGACCTACGGGTTGTCGGCCTGGA
CACTGGACGAGCGGCGTGAC

Product: cytochrome c oxidase, cbb3-type subunit III

Products: NA

Alternate protein names: Cytochrome c552 [H]

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MTDVRETRQAEAARAREHEDPHENQAPIPRYVLAMVAVLVAWGAWYIATAPINQAPELGDRRTLADLRGNAKGAGAKVDG
AAIFQSRCVACHQSNGQGLPGVFPPLAGSEWVNGNESRVARIVLRGVTGKLTVKGAVYNGAMPAFADQLTDAEIAAVLTH
VRVQWGNSASAISAEAVAASRADTAGMKGSFDGDAALGGSGG

Sequences:

>Translated_202_residues
MTDVRETRQAEAARAREHEDPHENQAPIPRYVLAMVAVLVAWGAWYIATAPINQAPELGDRRTLADLRGNAKGAGAKVDG
AAIFQSRCVACHQSNGQGLPGVFPPLAGSEWVNGNESRVARIVLRGVTGKLTVKGAVYNGAMPAFADQLTDAEIAAVLTH
VRVQWGNSASAISAEAVAASRADTAGMKGSFDGDAALGGSGG
>Mature_201_residues
TDVRETRQAEAARAREHEDPHENQAPIPRYVLAMVAVLVAWGAWYIATAPINQAPELGDRRTLADLRGNAKGAGAKVDGA
AIFQSRCVACHQSNGQGLPGVFPPLAGSEWVNGNESRVARIVLRGVTGKLTVKGAVYNGAMPAFADQLTDAEIAAVLTHV
RVQWGNSASAISAEAVAASRADTAGMKGSFDGDAALGGSGG

Specific function: This monoheme basic protein appears to function as an electron donor to cytochrome oxidase in T.thermophilus [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 20931; Mature: 20799

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDVRETRQAEAARAREHEDPHENQAPIPRYVLAMVAVLVAWGAWYIATAPINQAPELGD
CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCC
RRTLADLRGNAKGAGAKVDGAAIFQSRCVACHQSNGQGLPGVFPPLAGSEWVNGNESRVA
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
RIVLRGVTGKLTVKGAVYNGAMPAFADQLTDAEIAAVLTHVRVQWGNSASAISAEAVAAS
HHHHHCCCCEEEEEEEEECCCCHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
RADTAGMKGSFDGDAALGGSGG
CCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDVRETRQAEAARAREHEDPHENQAPIPRYVLAMVAVLVAWGAWYIATAPINQAPELGD
CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCC
RRTLADLRGNAKGAGAKVDGAAIFQSRCVACHQSNGQGLPGVFPPLAGSEWVNGNESRVA
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
RIVLRGVTGKLTVKGAVYNGAMPAFADQLTDAEIAAVLTHVRVQWGNSASAISAEAVAAS
HHHHHCCCCEEEEEEEEECCCCHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
RADTAGMKGSFDGDAALGGSGG
CCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2986626; 11152119 [H]