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The map label for this gene is fimA [C]

Identifier: 94313179

GI number: 94313179

Start: 840724

End: 841734

Strand: Direct

Name: fimA [C]

Synonym: Rmet_4253

Alternate gene names: 94313179

Gene position: 840724-841734 (Clockwise)

Preceding gene: 94313178

Following gene: 94313180

Centisome position: 32.59

GC content: 58.75

Gene sequence:

>1011_bases
ATGAACGTGACGTATAGAACGATCAAAGCTGCACTCCGGTGGTTTGTGCTGCCGGTCTTGCTGGCCCTCGGCGTGAACCA
TGGAGCCCTTGCCGCGTGCACAGTAACGACCGCCAATCCGGATTACATCTACACGCTACCCAGCACCCTTACTGTGGCTC
GCAACGCACCGGTGGGTACGGTGATCCTTAGCTACGCCCCCCCGGGACAGAACAACCCTACGGCCTCTGGCACCTGCCCC
GTGACGGCATATGCGGTCGATGCCATGGCCGGCTCATGGACCACGACGTCTGTCGCGGATGTGTACGCCACCAATGTCCC
TGGCATCGGTATCAAGGTCCTCGGGAAAGCCAGCAATCACCCAGTACCACTACTCCCTACGGTGTACCAATGGTCCGGTA
GCGCCACCGGACCTTTCAGCGGCTATTGGGACAGCTTTGGGTATCAGCTCGTCGTTACCGGGCCAGTTTCCCCAGGGACG
CTCAGTTTTGCGAGTCCTGTGGCCAGTATGTGGCTGTCGACTTCCACCACCGCGCTCGTGGATGCGGCGGTCGTCACCAA
CCTGCAGATCAACGGCACCACAAACATTGTGGCGCGTGCATGTACCACGCCCGATGTGACTGTCAATCTCGGAAATCACC
TGTCGTCGGAATTCTCTGGCGTGGGCTCGAAGACCTCGTCGACGAGTTTCAACATTGCGCTGAATGGCTGCCCGTCCGGG
CTGAACACGATCCAATACCAGATCGATCCGGTAACGTCGATCGTGTCGGGTACCGGCAATACGGTGGTGGCCCTGAATAG
CGGCTCGACGGCCAACCGAGTTGGCGTCCAGTTGCTCGACGGGAATGGCAACCCGCTGGCCTTGTCCTCGCCCATCACGT
TTAGCGGATATAGCAGCAGCACCGGCGGCGACTACACGATTCCACTGAAGGCCAGGTACTATCAGATCGATACACCCGTT
GGGCCGGGTTCTGCCAATACATCGATGATATTTACGATGACCTATCAATGA

Upstream 100 bases:

>100_bases
TCGGTGGCCCTGATGCAGGCGACGTGCGCGGAATGAGGATCAAGTCAATCGTGACAGATCAGATCATGAAACCCGCTTGG
AACCAATTGCGATTGAGAGG

Downstream 100 bases:

>100_bases
CTGTGTGGCGGGCTGGTCGCTCGCGGTGTGCAAGAAGTCTTGTCATGTGGATGCAGGCACGCGTCGCCACAGCCCTCACG
GCTGCGCGTGTTCCAACGTA

Product: Fimbrial protein

Products: NA

Alternate protein names: Fimbria Adhesin Protein; Fimbrial Assembly Protein; Type-1 Fimbrial Protein A Subunit; Fimbrial Componenet; Fimbrial Adhesin

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MNVTYRTIKAALRWFVLPVLLALGVNHGALAACTVTTANPDYIYTLPSTLTVARNAPVGTVILSYAPPGQNNPTASGTCP
VTAYAVDAMAGSWTTTSVADVYATNVPGIGIKVLGKASNHPVPLLPTVYQWSGSATGPFSGYWDSFGYQLVVTGPVSPGT
LSFASPVASMWLSTSTTALVDAAVVTNLQINGTTNIVARACTTPDVTVNLGNHLSSEFSGVGSKTSSTSFNIALNGCPSG
LNTIQYQIDPVTSIVSGTGNTVVALNSGSTANRVGVQLLDGNGNPLALSSPITFSGYSSSTGGDYTIPLKARYYQIDTPV
GPGSANTSMIFTMTYQ

Sequences:

>Translated_336_residues
MNVTYRTIKAALRWFVLPVLLALGVNHGALAACTVTTANPDYIYTLPSTLTVARNAPVGTVILSYAPPGQNNPTASGTCP
VTAYAVDAMAGSWTTTSVADVYATNVPGIGIKVLGKASNHPVPLLPTVYQWSGSATGPFSGYWDSFGYQLVVTGPVSPGT
LSFASPVASMWLSTSTTALVDAAVVTNLQINGTTNIVARACTTPDVTVNLGNHLSSEFSGVGSKTSSTSFNIALNGCPSG
LNTIQYQIDPVTSIVSGTGNTVVALNSGSTANRVGVQLLDGNGNPLALSSPITFSGYSSSTGGDYTIPLKARYYQIDTPV
GPGSANTSMIFTMTYQ
>Mature_336_residues
MNVTYRTIKAALRWFVLPVLLALGVNHGALAACTVTTANPDYIYTLPSTLTVARNAPVGTVILSYAPPGQNNPTASGTCP
VTAYAVDAMAGSWTTTSVADVYATNVPGIGIKVLGKASNHPVPLLPTVYQWSGSATGPFSGYWDSFGYQLVVTGPVSPGT
LSFASPVASMWLSTSTTALVDAAVVTNLQINGTTNIVARACTTPDVTVNLGNHLSSEFSGVGSKTSSTSFNIALNGCPSG
LNTIQYQIDPVTSIVSGTGNTVVALNSGSTANRVGVQLLDGNGNPLALSSPITFSGYSSSTGGDYTIPLKARYYQIDTPV
GPGSANTSMIFTMTYQ

Specific function: Fimbriae (Also Called Pili), Polar Filaments Radiating From The Surface Of The Bacterium To A Length Of 0.5-1.5 Micrometers And Numbering 100-300 Per Cell, Enable Bacteria To Colonize The Epithelium Of Specific Host Organs. [C]

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbria [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34612; Mature: 34612

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVTYRTIKAALRWFVLPVLLALGVNHGALAACTVTTANPDYIYTLPSTLTVARNAPVGT
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEECCCEEEEECCCCCEE
VILSYAPPGQNNPTASGTCPVTAYAVDAMAGSWTTTSVADVYATNVPGIGIKVLGKASNH
EEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEECCCCC
PVPLLPTVYQWSGSATGPFSGYWDSFGYQLVVTGPVSPGTLSFASPVASMWLSTSTTALV
CCCCCCEEEECCCCCCCCCCCCHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHE
DAAVVTNLQINGTTNIVARACTTPDVTVNLGNHLSSEFSGVGSKTSSTSFNIALNGCPSG
EEEEEEEEEECCCCEEEEEEECCCCEEEECCCCCHHHHHCCCCCCCCCEEEEEEECCCCC
LNTIQYQIDPVTSIVSGTGNTVVALNSGSTANRVGVQLLDGNGNPLALSSPITFSGYSSS
CCEEEEEECCHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEECCEEECCCCCC
TGGDYTIPLKARYYQIDTPVGPGSANTSMIFTMTYQ
CCCCEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MNVTYRTIKAALRWFVLPVLLALGVNHGALAACTVTTANPDYIYTLPSTLTVARNAPVGT
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEECCCEEEEECCCCCEE
VILSYAPPGQNNPTASGTCPVTAYAVDAMAGSWTTTSVADVYATNVPGIGIKVLGKASNH
EEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEECCCCC
PVPLLPTVYQWSGSATGPFSGYWDSFGYQLVVTGPVSPGTLSFASPVASMWLSTSTTALV
CCCCCCEEEECCCCCCCCCCCCHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHE
DAAVVTNLQINGTTNIVARACTTPDVTVNLGNHLSSEFSGVGSKTSSTSFNIALNGCPSG
EEEEEEEEEECCCCEEEEEEECCCCEEEECCCCCHHHHHCCCCCCCCCEEEEEEECCCCC
LNTIQYQIDPVTSIVSGTGNTVVALNSGSTANRVGVQLLDGNGNPLALSSPITFSGYSSS
CCEEEEEECCHHHHHCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEECCEEECCCCCC
TGGDYTIPLKARYYQIDTPVGPGSANTSMIFTMTYQ
CCCCEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA