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The map label for this gene is htrE [H]

Identifier: 94313178

GI number: 94313178

Start: 838107

End: 840659

Strand: Direct

Name: htrE [H]

Synonym: Rmet_4252

Alternate gene names: 94313178

Gene position: 838107-840659 (Clockwise)

Preceding gene: 94313177

Following gene: 94313179

Centisome position: 32.48

GC content: 64.28

Gene sequence:

>2553_bases
ATGCGTCAGTCATCTCCAACTCTCCCAGTGCGCCGTCAGATCAGTCTGGCTGCGTGTCTGCTGGTAGCCAGCGCGGCCGC
CATGGCCGCCGACGGCGGGAGCCTGGTGGCTGAGGCGAAGTTCAGCAGCATGTTTCTGCGCCAGTCACCCGGCGAGCAGA
TCGATCTGAGCCGCTTCAACCGGGGAAACGCGGCACTGGCCGGCACTTACCGCGCCGACCTGTATGTCAACCAGACCTGG
ATCGGCCGCGCCGACGTGACGCTGCGCGCCGTCGACGGGAATGGCAGTAATGTCCAACCGTGCTTTGACCGGGCGCTTCT
CGAGCGCATGGGGGTGGATCTGACCAAGCTCAAGCCGCAGGCCAGCGCACGCCTGGAGGGCGAGGGGGCTTGCGTCGCGT
TGCCGGAGATCATCGAAGATGCAACGGCAACCTTTGATAATGGCGAGCAGCGCCTGGACGTGAGCGTGCCGCAGGCGAAC
ATGTCGCGCCAGGCCCGCGGCTATGTGGATCCGAAGTACTGGGACGAAGGCATCAACGCCGCGCGTTTGCAGTACAACGC
CAATGTGTATCACAGCGACAGCCAGGGCATCGCTTCGACCCAGGGTTACCTGGGTCTGGACGCCGGCGTGAACATCGGCG
CCTGGCGTTTTCATCATCGGGGAAACTTCACACACGACCAGCAGACTGGTAATCACTACCAGAGCGTGCAGACGAACTTG
CAACGCTCGATCGTGCCGCTCAAGAGTCAGCTAGTGATTGGCGAGGCCTTCACCGATGGGTCGCTGTTCGACAGCGTGGG
CTTCCGTGGCGTGCAGCTGGCCAGCGATGACCGCATGTATCCCGAGTCGCAGCGCGGTTATGCGCCGATCGTACGTGGCA
TTGCCCAGAGCAACGCGCGGGTGCAGATCCGCCAGAATGGCAACATCCTCTATGACACCACGGTTTCTGCCGGTCCGTTC
GAGATCAACGATCTCTATCCGACTGGCTACGGCGGTGACCTGGAAGTCAGCGTCACCGAGGCCGACGGCAGCGTGCATGT
CTCGCGTGTGCCCTACGCGGCCGCCGTCAACGCGCTGCGCCCCGGTGTCACGCGCTATAGCGTCACGGCGGGCCAGTACC
GCAATCCGAGCGTTCATATCTCGCCGCTCCTGCTGCAGGGCACGGTACAGCACGGTTTCACCAATCTCTTCACCGGCTAC
GGAGGCTTCGTGGCATCGCCTCACTACATCGCCGGCCTGTTGGGGGCAGCGCTGAACACCGACTATGGCGCCTTCGGCGC
GGACATCACCCATGCCACCACGTGGCTGGTTAATGAGCCCAGCCGCAGTGGCCAGAGCGTGCGCCTTTCCTACAGCAAGC
TGGTGCAGCCGACCAACACCAACCTTACGCTGGCCGCTTACCGTTACTCCAGCGGAGGCTATCTGGGTCTGGCCGACGCG
ATGAACCTGCGGGACCTGGATGAACGCGGCATGGCCTCTGCCATGAGTGGCATCCAGCGCGGTAGGTTCCAGGTCACTGT
CAACCAGAACCTCAGGCAGGGCTGGGGCAACTTCTATCTGTCGGGTTCTGTGCAGGACTACTGGAACCGCAATGGCCGCG
ATACCCAGCTCCAGGCTGGGTACAACAACAGCTACAAGCGTATCAACTACGGCGTCTCGGTCTCACGCCAGCTCAACGTC
ACGACCAACAAGTGGGACAACCGCGTGATGCTCAACGTGGGCATCCCGCTGGGCAAGAGTCCGCGCGCGCCGTATTCGAT
GACCAGCCTGCAGCAGGATTCCTCGGGCAGCACCAGTCTGCACGAAACGGTGACGGGCACGCTTGGCAGGGACAACGCCG
TGGCCTACGGTATCAACGTGGGCCGCAACAGCGGCAATGGGGCGGCCAGCACCAGCGTAGGTGGCAATGTGTCCTATGTA
TCGCCGGTGACGACGCTCAGCGCGAGTGCGAGCAGGAGCAGCAATTACACGCAGATGAGCGCAGGGCTGGCCGGCGGCAT
CGTGGCGTACGCGGGGGGCGTGGCGTTCACACCGAGCCTGGGCGATACGGTGGCGGTCGTGGAGGCCAAGGATGCGGCCG
GCGCGCGGCTGACCAACGGCAGCGGCCTGCGCGTGGATCCTTGGGGCCATGCGGTGGTATCGAACCTGACGCCGTTTGCG
CGCAATCAGGTCGAGATTGATCCACAGGGACTGCCGATGAATGTGGAGTTGAAGTCGACCATGCAGCAGGTGGCGCCGAC
CGCCGGGGCCATCGTGAAGCTGAAGTTCGACACCGAGAACGCCGGCCGCATGGCGATCCTCGAGGTCAGGCGTGCTGATG
GCAAGCCGTTGCCGTTTGGGGCCGAGGTGCGGGACGCGGGTGGCCAGCCTGTGGGCACGGTGGGTCAGGGCGGGCGCATC
ATCGCGCGCGGGCTCAAGACCGACAGCGGCACCCTCAGCGTGGCGCTGGGGGAGGACGCAGCCAAATCATGCCAACTGCG
CTACCAGTTGCCTCAGGAGCGGAACGACCGCCCCGCTTCGGTGGCCCTGATGCAGGCGACGTGCGCGGAATGA

Upstream 100 bases:

>100_bases
TGCCTAGGGCAGCCCCTTTCCAGACTCCTTCCTTTGTGGGCAAGACCCCGGTCTGCCGATCAGGGCAGCAGTCTGTCCGC
TGTTTCTATCTGATTCCCGA

Downstream 100 bases:

>100_bases
GGATCAAGTCAATCGTGACAGATCAGATCATGAAACCCGCTTGGAACCAATTGCGATTGAGAGGATGAACGTGACGTATA
GAACGATCAAAGCTGCACTC

Product: fimbrial biogenesis outer membrane usher protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 850; Mature: 850

Protein sequence:

>850_residues
MRQSSPTLPVRRQISLAACLLVASAAAMAADGGSLVAEAKFSSMFLRQSPGEQIDLSRFNRGNAALAGTYRADLYVNQTW
IGRADVTLRAVDGNGSNVQPCFDRALLERMGVDLTKLKPQASARLEGEGACVALPEIIEDATATFDNGEQRLDVSVPQAN
MSRQARGYVDPKYWDEGINAARLQYNANVYHSDSQGIASTQGYLGLDAGVNIGAWRFHHRGNFTHDQQTGNHYQSVQTNL
QRSIVPLKSQLVIGEAFTDGSLFDSVGFRGVQLASDDRMYPESQRGYAPIVRGIAQSNARVQIRQNGNILYDTTVSAGPF
EINDLYPTGYGGDLEVSVTEADGSVHVSRVPYAAAVNALRPGVTRYSVTAGQYRNPSVHISPLLLQGTVQHGFTNLFTGY
GGFVASPHYIAGLLGAALNTDYGAFGADITHATTWLVNEPSRSGQSVRLSYSKLVQPTNTNLTLAAYRYSSGGYLGLADA
MNLRDLDERGMASAMSGIQRGRFQVTVNQNLRQGWGNFYLSGSVQDYWNRNGRDTQLQAGYNNSYKRINYGVSVSRQLNV
TTNKWDNRVMLNVGIPLGKSPRAPYSMTSLQQDSSGSTSLHETVTGTLGRDNAVAYGINVGRNSGNGAASTSVGGNVSYV
SPVTTLSASASRSSNYTQMSAGLAGGIVAYAGGVAFTPSLGDTVAVVEAKDAAGARLTNGSGLRVDPWGHAVVSNLTPFA
RNQVEIDPQGLPMNVELKSTMQQVAPTAGAIVKLKFDTENAGRMAILEVRRADGKPLPFGAEVRDAGGQPVGTVGQGGRI
IARGLKTDSGTLSVALGEDAAKSCQLRYQLPQERNDRPASVALMQATCAE

Sequences:

>Translated_850_residues
MRQSSPTLPVRRQISLAACLLVASAAAMAADGGSLVAEAKFSSMFLRQSPGEQIDLSRFNRGNAALAGTYRADLYVNQTW
IGRADVTLRAVDGNGSNVQPCFDRALLERMGVDLTKLKPQASARLEGEGACVALPEIIEDATATFDNGEQRLDVSVPQAN
MSRQARGYVDPKYWDEGINAARLQYNANVYHSDSQGIASTQGYLGLDAGVNIGAWRFHHRGNFTHDQQTGNHYQSVQTNL
QRSIVPLKSQLVIGEAFTDGSLFDSVGFRGVQLASDDRMYPESQRGYAPIVRGIAQSNARVQIRQNGNILYDTTVSAGPF
EINDLYPTGYGGDLEVSVTEADGSVHVSRVPYAAAVNALRPGVTRYSVTAGQYRNPSVHISPLLLQGTVQHGFTNLFTGY
GGFVASPHYIAGLLGAALNTDYGAFGADITHATTWLVNEPSRSGQSVRLSYSKLVQPTNTNLTLAAYRYSSGGYLGLADA
MNLRDLDERGMASAMSGIQRGRFQVTVNQNLRQGWGNFYLSGSVQDYWNRNGRDTQLQAGYNNSYKRINYGVSVSRQLNV
TTNKWDNRVMLNVGIPLGKSPRAPYSMTSLQQDSSGSTSLHETVTGTLGRDNAVAYGINVGRNSGNGAASTSVGGNVSYV
SPVTTLSASASRSSNYTQMSAGLAGGIVAYAGGVAFTPSLGDTVAVVEAKDAAGARLTNGSGLRVDPWGHAVVSNLTPFA
RNQVEIDPQGLPMNVELKSTMQQVAPTAGAIVKLKFDTENAGRMAILEVRRADGKPLPFGAEVRDAGGQPVGTVGQGGRI
IARGLKTDSGTLSVALGEDAAKSCQLRYQLPQERNDRPASVALMQATCAE
>Mature_850_residues
MRQSSPTLPVRRQISLAACLLVASAAAMAADGGSLVAEAKFSSMFLRQSPGEQIDLSRFNRGNAALAGTYRADLYVNQTW
IGRADVTLRAVDGNGSNVQPCFDRALLERMGVDLTKLKPQASARLEGEGACVALPEIIEDATATFDNGEQRLDVSVPQAN
MSRQARGYVDPKYWDEGINAARLQYNANVYHSDSQGIASTQGYLGLDAGVNIGAWRFHHRGNFTHDQQTGNHYQSVQTNL
QRSIVPLKSQLVIGEAFTDGSLFDSVGFRGVQLASDDRMYPESQRGYAPIVRGIAQSNARVQIRQNGNILYDTTVSAGPF
EINDLYPTGYGGDLEVSVTEADGSVHVSRVPYAAAVNALRPGVTRYSVTAGQYRNPSVHISPLLLQGTVQHGFTNLFTGY
GGFVASPHYIAGLLGAALNTDYGAFGADITHATTWLVNEPSRSGQSVRLSYSKLVQPTNTNLTLAAYRYSSGGYLGLADA
MNLRDLDERGMASAMSGIQRGRFQVTVNQNLRQGWGNFYLSGSVQDYWNRNGRDTQLQAGYNNSYKRINYGVSVSRQLNV
TTNKWDNRVMLNVGIPLGKSPRAPYSMTSLQQDSSGSTSLHETVTGTLGRDNAVAYGINVGRNSGNGAASTSVGGNVSYV
SPVTTLSASASRSSNYTQMSAGLAGGIVAYAGGVAFTPSLGDTVAVVEAKDAAGARLTNGSGLRVDPWGHAVVSNLTPFA
RNQVEIDPQGLPMNVELKSTMQQVAPTAGAIVKLKFDTENAGRMAILEVRRADGKPLPFGAEVRDAGGQPVGTVGQGGRI
IARGLKTDSGTLSVALGEDAAKSCQLRYQLPQERNDRPASVALMQATCAE

Specific function: Involved in the export and assembly of the type 3 fimbrial subunit (mrkA) [H]

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI1786332, Length=857, Percent_Identity=37.9229871645274, Blast_Score=515, Evalue=1e-147,
Organism=Escherichia coli, GI1790772, Length=870, Percent_Identity=36.3218390804598, Blast_Score=494, Evalue=1e-140,
Organism=Escherichia coli, GI1787172, Length=867, Percent_Identity=35.0634371395617, Blast_Score=449, Evalue=1e-127,
Organism=Escherichia coli, GI1786744, Length=846, Percent_Identity=33.5697399527187, Blast_Score=446, Evalue=1e-126,
Organism=Escherichia coli, GI1789533, Length=857, Percent_Identity=35.4725787631272, Blast_Score=444, Evalue=1e-126,
Organism=Escherichia coli, GI1788427, Length=839, Percent_Identity=32.53873659118, Blast_Score=405, Evalue=1e-114,
Organism=Escherichia coli, GI87081778, Length=854, Percent_Identity=27.9859484777518, Blast_Score=240, Evalue=2e-64,
Organism=Escherichia coli, GI1789610, Length=857, Percent_Identity=25.5542590431739, Blast_Score=156, Evalue=4e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 90692; Mature: 90692

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQSSPTLPVRRQISLAACLLVASAAAMAADGGSLVAEAKFSSMFLRQSPGEQIDLSRFN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCEEEHHHCC
RGNAALAGTYRADLYVNQTWIGRADVTLRAVDGNGSNVQPCFDRALLERMGVDLTKLKPQ
CCCEEEEEEEEEEEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEECCCC
ASARLEGEGACVALPEIIEDATATFDNGEQRLDVSVPQANMSRQARGYVDPKYWDEGINA
CCCEECCCCCEEECHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHCCCCCHHHHHCCCCE
ARLQYNANVYHSDSQGIASTQGYLGLDAGVNIGAWRFHHRGNFTHDQQTGNHYQSVQTNL
EEEEEECEEEECCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHH
QRSIVPLKSQLVIGEAFTDGSLFDSVGFRGVQLASDDRMYPESQRGYAPIVRGIAQSNAR
HHHHCCCCCEEEEEEECCCCCHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCE
VQIRQNGNILYDTTVSAGPFEINDLYPTGYGGDLEVSVTEADGSVHVSRVPYAAAVNALR
EEEEECCCEEEEECCCCCCEEECCCCCCCCCCEEEEEEEECCCCEEEECCCHHHHHHHHC
PGVTRYSVTAGQYRNPSVHISPLLLQGTVQHGFTNLFTGYGGFVASPHYIAGLLGAALNT
CCCEEEEEECCCCCCCCEEEEEEEEECCHHHCHHHHHCCCCCCCCCHHHHHHHHHHHHCC
DYGAFGADITHATTWLVNEPSRSGQSVRLSYSKLVQPTNTNLTLAAYRYSSGGYLGLADA
CCCCCCCCCCCEEEEEEECCCCCCCEEEEEHHHHCCCCCCCEEEEEEEECCCCEEEECCC
MNLRDLDERGMASAMSGIQRGRFQVTVNQNLRQGWGNFYLSGSVQDYWNRNGRDTQLQAG
CCCCCCHHHHHHHHHHHHHCCEEEEEECCCHHCCCCCEEEECCCHHHHCCCCCCCEEECC
YNNSYKRINYGVSVSRQLNVTTNKWDNRVMLNVGIPLGKSPRAPYSMTSLQQDSSGSTSL
CCCCCEEEEECEEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCH
HETVTGTLGRDNAVAYGINVGRNSGNGAASTSVGGNVSYVSPVTTLSASASRSSNYTQMS
HHHHCCCCCCCCEEEEEEEECCCCCCCCEECCCCCCEEEECCHHEEECCCCCCCCCEEEC
AGLAGGIVAYAGGVAFTPSLGDTVAVVEAKDAAGARLTNGSGLRVDPWGHAVVSNLTPFA
CCCCCCHHHHCCCEEECCCCCCEEEEEEECCCCCCEEECCCCEEECCCCHHHHHCCCCCC
RNQVEIDPQGLPMNVELKSTMQQVAPTAGAIVKLKFDTENAGRMAILEVRRADGKPLPFG
CCEEEECCCCCEEEEEHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCC
AEVRDAGGQPVGTVGQGGRIIARGLKTDSGTLSVALGEDAAKSCQLRYQLPQERNDRPAS
CHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCE
VALMQATCAE
EEEEEHHCCC
>Mature Secondary Structure
MRQSSPTLPVRRQISLAACLLVASAAAMAADGGSLVAEAKFSSMFLRQSPGEQIDLSRFN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCEEEHHHCC
RGNAALAGTYRADLYVNQTWIGRADVTLRAVDGNGSNVQPCFDRALLERMGVDLTKLKPQ
CCCEEEEEEEEEEEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEECCCC
ASARLEGEGACVALPEIIEDATATFDNGEQRLDVSVPQANMSRQARGYVDPKYWDEGINA
CCCEECCCCCEEECHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHCCCCCHHHHHCCCCE
ARLQYNANVYHSDSQGIASTQGYLGLDAGVNIGAWRFHHRGNFTHDQQTGNHYQSVQTNL
EEEEEECEEEECCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHH
QRSIVPLKSQLVIGEAFTDGSLFDSVGFRGVQLASDDRMYPESQRGYAPIVRGIAQSNAR
HHHHCCCCCEEEEEEECCCCCHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCE
VQIRQNGNILYDTTVSAGPFEINDLYPTGYGGDLEVSVTEADGSVHVSRVPYAAAVNALR
EEEEECCCEEEEECCCCCCEEECCCCCCCCCCEEEEEEEECCCCEEEECCCHHHHHHHHC
PGVTRYSVTAGQYRNPSVHISPLLLQGTVQHGFTNLFTGYGGFVASPHYIAGLLGAALNT
CCCEEEEEECCCCCCCCEEEEEEEEECCHHHCHHHHHCCCCCCCCCHHHHHHHHHHHHCC
DYGAFGADITHATTWLVNEPSRSGQSVRLSYSKLVQPTNTNLTLAAYRYSSGGYLGLADA
CCCCCCCCCCCEEEEEEECCCCCCCEEEEEHHHHCCCCCCCEEEEEEEECCCCEEEECCC
MNLRDLDERGMASAMSGIQRGRFQVTVNQNLRQGWGNFYLSGSVQDYWNRNGRDTQLQAG
CCCCCCHHHHHHHHHHHHHCCEEEEEECCCHHCCCCCEEEECCCHHHHCCCCCCCEEECC
YNNSYKRINYGVSVSRQLNVTTNKWDNRVMLNVGIPLGKSPRAPYSMTSLQQDSSGSTSL
CCCCCEEEEECEEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCH
HETVTGTLGRDNAVAYGINVGRNSGNGAASTSVGGNVSYVSPVTTLSASASRSSNYTQMS
HHHHCCCCCCCCEEEEEEEECCCCCCCCEECCCCCCEEEECCHHEEECCCCCCCCCEEEC
AGLAGGIVAYAGGVAFTPSLGDTVAVVEAKDAAGARLTNGSGLRVDPWGHAVVSNLTPFA
CCCCCCHHHHCCCEEECCCCCCEEEEEEECCCCCCEEECCCCEEECCCCHHHHHCCCCCC
RNQVEIDPQGLPMNVELKSTMQQVAPTAGAIVKLKFDTENAGRMAILEVRRADGKPLPFG
CCEEEECCCCCEEEEEHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCC
AEVRDAGGQPVGTVGQGGRIIARGLKTDSGTLSVALGEDAAKSCQLRYQLPQERNDRPAS
CHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCE
VALMQATCAE
EEEEEHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1670938 [H]