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The map label for this gene is yraO [H]

Identifier: 94312360

GI number: 94312360

Start: 3707690

End: 3708277

Strand: Reverse

Name: yraO [H]

Synonym: Rmet_3429

Alternate gene names: 94312360

Gene position: 3708277-3707690 (Counterclockwise)

Preceding gene: 94312361

Following gene: 94312359

Centisome position: 94.4

GC content: 64.97

Gene sequence:

>588_bases
ATGAGTATTGAAAGTATCGAGCAGCAATTCCTGGACAGTGCCGAGACCAAGCGGATGGCCGCCACGCTGATGGCGCCTCA
CATTGACGCCGCCGTGGAGCGGATGGTCGCGGCCCTGACCAGCGGCAACAAGATCCTGGCCTGCGGCAACGGCGGCTCGG
CCGCGGACGCCCAGCATTTCGCGGCCGAACTGGTTGGCCGGTTCGAGCGCGAGCGCCCGGGCCTGGCGGCCATCGCCCTG
ACCACGGACAGTTCGATCCTGACGGCGATTGGCAACGACTACGATTTTTCGGTGGTGTTCTCCAAGCAGGTGGAAGCCCT
GGGCCAGCCCGGCGACATCCTGCTGGCGCTCTCCACTTCGGGCAATTCGGCCAACGTGATCGCGGCCATCCACGCCGCGC
ACCAGCGCGACATGAGCGTGGTGGCGCTGACCGGCAAGGGTGGCGGCAAGATCGCCACGGTGCTGGACGAATTCGACATT
GACCTGTGCGTGCCGAGCGATCGGACCGCGCGGATCCAGGAAGTGCATCTGCTGACACTGCATTGCCTCTGCGACGGTAT
CGACGAGGCACTGCTGGGTGAGGCATAA

Upstream 100 bases:

>100_bases
ATGGCTGCGGAACGCGTTCGACCTCGGGGCGCTGGATTCCGAGGGCGGCGGCGAGGGGCCTGCGTCATAATGCGCGGGAT
TGTGCAGAAGTCATCAAGCC

Downstream 100 bases:

>100_bases
GGACCACGCCAGTGGACGCCCGCGAGTTATCCCGGGTTATTCACAGGCCTGCCCACAACGTATCCACAGGTTTTGCGGCG
TCATCCACAGTGATATCCAC

Product: DnaA initiator-associating factor for replication initiation

Products: NA

Alternate protein names: Sedoheptulose 7-phosphate isomerase [H]

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MSIESIEQQFLDSAETKRMAATLMAPHIDAAVERMVAALTSGNKILACGNGGSAADAQHFAAELVGRFERERPGLAAIAL
TTDSSILTAIGNDYDFSVVFSKQVEALGQPGDILLALSTSGNSANVIAAIHAAHQRDMSVVALTGKGGGKIATVLDEFDI
DLCVPSDRTARIQEVHLLTLHCLCDGIDEALLGEA

Sequences:

>Translated_195_residues
MSIESIEQQFLDSAETKRMAATLMAPHIDAAVERMVAALTSGNKILACGNGGSAADAQHFAAELVGRFERERPGLAAIAL
TTDSSILTAIGNDYDFSVVFSKQVEALGQPGDILLALSTSGNSANVIAAIHAAHQRDMSVVALTGKGGGKIATVLDEFDI
DLCVPSDRTARIQEVHLLTLHCLCDGIDEALLGEA
>Mature_194_residues
SIESIEQQFLDSAETKRMAATLMAPHIDAAVERMVAALTSGNKILACGNGGSAADAQHFAAELVGRFERERPGLAAIALT
TDSSILTAIGNDYDFSVVFSKQVEALGQPGDILLALSTSGNSANVIAAIHAAHQRDMSVVALTGKGGGKIATVLDEFDID
LCVPSDRTARIQEVHLLTLHCLCDGIDEALLGEA

Specific function: Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate [H]

COG id: COG0279

COG function: function code G; Phosphoheptose isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789539, Length=189, Percent_Identity=52.3809523809524, Blast_Score=196, Evalue=7e-52,
Organism=Escherichia coli, GI1786416, Length=156, Percent_Identity=49.3589743589744, Blast_Score=150, Evalue=7e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020620
- InterPro:   IPR001347 [H]

Pfam domain/function: PF01380 SIS [H]

EC number: =5.3.1.28 [H]

Molecular weight: Translated: 20389; Mature: 20258

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIESIEQQFLDSAETKRMAATLMAPHIDAAVERMVAALTSGNKILACGNGGSAADAQHF
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHH
AAELVGRFERERPGLAAIALTTDSSILTAIGNDYDFSVVFSKQVEALGQPGDILLALSTS
HHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCEEEEEEEHHHHHCCCCCCEEEEEECC
GNSANVIAAIHAAHQRDMSVVALTGKGGGKIATVLDEFDIDLCVPSDRTARIQEVHLLTL
CCCCEEEEEEEHHHCCCCEEEEEECCCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHH
HCLCDGIDEALLGEA
HHHHCCHHHHHCCCC
>Mature Secondary Structure 
SIESIEQQFLDSAETKRMAATLMAPHIDAAVERMVAALTSGNKILACGNGGSAADAQHF
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHH
AAELVGRFERERPGLAAIALTTDSSILTAIGNDYDFSVVFSKQVEALGQPGDILLALSTS
HHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCEEEEEEEHHHHHCCCCCCEEEEEECC
GNSANVIAAIHAAHQRDMSVVALTGKGGGKIATVLDEFDIDLCVPSDRTARIQEVHLLTL
CCCCEEEEEEEHHHCCCCEEEEEECCCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHH
HCLCDGIDEALLGEA
HHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA