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The map label for this gene is yraP [C]

Identifier: 94312359

GI number: 94312359

Start: 3706681

End: 3707535

Strand: Reverse

Name: yraP [C]

Synonym: Rmet_3428

Alternate gene names: 94312359

Gene position: 3707535-3706681 (Counterclockwise)

Preceding gene: 94312360

Following gene: 94312358

Centisome position: 94.39

GC content: 67.25

Gene sequence:

>855_bases
ATGACGAACGTGACCAAGACTAACCAGAAGAAGACTTCCCCGGCCCGTATCGCACGCACGGCCGTCACCGTGGCCGCACT
GATCGTGTCGGCCACGCAGCTCGCCGGCTGCTTCCCGGTGCTGGCCGGCGCGGTCGGTACCGGCGTGGTGATGGCCACCG
ACCGCCGGCCCACGGGCACGCAGACGATCGACCGTGGCCTGCAGATGGAAATCGACAGCACGCTGAGCTCGCGCTTCAGC
GGCGACAAGGCCCGCGTGGAGGCGGCGGTGTTCAACCGCAAGGTGCTGCTGGTGGGCGAAGTCAGCAATGCCGACGTCAA
GCAGCAGGTCGAACAGTACGTGCGCGGCCTGCAGAACACGCGTGACGTGGTGAACGAACTCCAGGTCACGGCCTCGCCGG
GCTTCATGACGCGCAGCAATGACGCGTACCTGACCAGCAAGGTCAAGACGCTGATGGTGACCGCCGAGGGCGTTCCCGCC
AATTCGATCAAGGTTACGACGGATAAGGGCGTGGTCTATCTGCTGGGCATCGTGACCAATGCCGAAGGCGACAAGGCCAC
GGACGTGGCCCGCAACTCCAGCGGCGTGCAGAAGGTGGTCAAGGCGTTCGACTACATCAGCGAATCCGAGCGCGCCCGTC
TGGATGCATTGGGTAGCTCGCAGAACGGCAACACCGGCAGCGAAGCGGTGGGTACGCCGGCGCCGGTCCAGTCGGTGCCG
GGTAGCGCACCCAACGCCCCCGTGAACTCCGACGCGCCCGCGTCGATGGGCACGTCCGGTGGCGCGACCACGAGCCCTGT
GGCCGCGCCGGTCTCGTCGCCGGTGGCGCTGCCGCCGGGCCGCAACCTGCCGTAA

Upstream 100 bases:

>100_bases
ACAACGTATCCACAGGTTTTGCGGCGTCATCCACAGTGATATCCACAGCCGCGCAACCGCCCTGCAAACCGCTGCAACCT
GATTTCCTGCAAAGGACCGC

Downstream 100 bases:

>100_bases
GCGACATGACGCTCGCGCCGCGGTACCTGAGGGGCGTCGTGGCGGGTTTCTGCGTGGCGCCGTCGCTGGCGCTCGCGCAG
CCGGCTTCGGCACCCGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MTNVTKTNQKKTSPARIARTAVTVAALIVSATQLAGCFPVLAGAVGTGVVMATDRRPTGTQTIDRGLQMEIDSTLSSRFS
GDKARVEAAVFNRKVLLVGEVSNADVKQQVEQYVRGLQNTRDVVNELQVTASPGFMTRSNDAYLTSKVKTLMVTAEGVPA
NSIKVTTDKGVVYLLGIVTNAEGDKATDVARNSSGVQKVVKAFDYISESERARLDALGSSQNGNTGSEAVGTPAPVQSVP
GSAPNAPVNSDAPASMGTSGGATTSPVAAPVSSPVALPPGRNLP

Sequences:

>Translated_284_residues
MTNVTKTNQKKTSPARIARTAVTVAALIVSATQLAGCFPVLAGAVGTGVVMATDRRPTGTQTIDRGLQMEIDSTLSSRFS
GDKARVEAAVFNRKVLLVGEVSNADVKQQVEQYVRGLQNTRDVVNELQVTASPGFMTRSNDAYLTSKVKTLMVTAEGVPA
NSIKVTTDKGVVYLLGIVTNAEGDKATDVARNSSGVQKVVKAFDYISESERARLDALGSSQNGNTGSEAVGTPAPVQSVP
GSAPNAPVNSDAPASMGTSGGATTSPVAAPVSSPVALPPGRNLP
>Mature_283_residues
TNVTKTNQKKTSPARIARTAVTVAALIVSATQLAGCFPVLAGAVGTGVVMATDRRPTGTQTIDRGLQMEIDSTLSSRFSG
DKARVEAAVFNRKVLLVGEVSNADVKQQVEQYVRGLQNTRDVVNELQVTASPGFMTRSNDAYLTSKVKTLMVTAEGVPAN
SIKVTTDKGVVYLLGIVTNAEGDKATDVARNSSGVQKVVKAFDYISESERARLDALGSSQNGNTGSEAVGTPAPVQSVPG
SAPNAPVNSDAPASMGTSGGATTSPVAAPVSSPVALPPGRNLP

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1789540, Length=183, Percent_Identity=34.9726775956284, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 29258; Mature: 29127

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNVTKTNQKKTSPARIARTAVTVAALIVSATQLAGCFPVLAGAVGTGVVMATDRRPTGT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCH
QTIDRGLQMEIDSTLSSRFSGDKARVEAAVFNRKVLLVGEVSNADVKQQVEQYVRGLQNT
HHHHCCCEEEHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHH
RDVVNELQVTASPGFMTRSNDAYLTSKVKTLMVTAEGVPANSIKVTTDKGVVYLLGIVTN
HHHHHHHEEECCCCCEECCCCCEEHCCEEEEEEEECCCCCCCEEEEECCCEEEEEEEEEC
AEGDKATDVARNSSGVQKVVKAFDYISESERARLDALGSSQNGNTGSEAVGTPAPVQSVP
CCCCHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCC
GSAPNAPVNSDAPASMGTSGGATTSPVAAPVSSPVALPPGRNLP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC
>Mature Secondary Structure 
TNVTKTNQKKTSPARIARTAVTVAALIVSATQLAGCFPVLAGAVGTGVVMATDRRPTGT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCH
QTIDRGLQMEIDSTLSSRFSGDKARVEAAVFNRKVLLVGEVSNADVKQQVEQYVRGLQNT
HHHHCCCEEEHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHH
RDVVNELQVTASPGFMTRSNDAYLTSKVKTLMVTAEGVPANSIKVTTDKGVVYLLGIVTN
HHHHHHHEEECCCCCEECCCCCEEHCCEEEEEEEECCCCCCCEEEEECCCEEEEEEEEEC
AEGDKATDVARNSSGVQKVVKAFDYISESERARLDALGSSQNGNTGSEAVGTPAPVQSVP
CCCCHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCC
GSAPNAPVNSDAPASMGTSGGATTSPVAAPVSSPVALPPGRNLP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]