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The map label for this gene is 94312358

Identifier: 94312358

GI number: 94312358

Start: 3706298

End: 3706675

Strand: Reverse

Name: 94312358

Synonym: Rmet_3427

Alternate gene names: NA

Gene position: 3706675-3706298 (Counterclockwise)

Preceding gene: 94312359

Following gene: 94312357

Centisome position: 94.36

GC content: 70.9

Gene sequence:

>378_bases
ATGACGCTCGCGCCGCGGTACCTGAGGGGCGTCGTGGCGGGTTTCTGCGTGGCGCCGTCGCTGGCGCTCGCGCAGCCGGC
TTCGGCACCCGCCGGGCCGGCCGAAGCCGGCAAGCTGACCGTGGAGGCGCAGGCGGCCCGCACGATGCAGGCGCGCAATC
TCGCCGCGTCCTGCGCGGTCTGCCACGGCACGGACGGCAAGCCGCCCGCGGACGGTCCGATTCCGCGACTGGCGGGCCGG
CAGCAGGCCGATCTCGTCGAGCTGATGTTCAATTTCAAGAACGGCAAGCGCTCCGGGACCGTGATGCCGCAAATCGCCAA
GGGCTATAGCGACGCGCAGATCCTCGCGATGGCCGCGTGGTTCGCCGACCAGAAATAG

Upstream 100 bases:

>100_bases
CGTCGATGGGCACGTCCGGTGGCGCGACCACGAGCCCTGTGGCCGCGCCGGTCTCGTCGCCGGTGGCGCTGCCGCCGGGC
CGCAACCTGCCGTAAGCGAC

Downstream 100 bases:

>100_bases
CCCATGCAAAGACGCTCTGTCCTACAGGCCGCCCTGGCCGGTGTCGCGGCCACCACGCTCGGCATGTTGACGCCGCGTCA
GGCGCGCGCAGCAACCGCAG

Product: cytochrome subunit of sulfide dehydrogenase, Flavocytochrome c cytochrome subunit, putative soxE-like protein

Products: NA

Alternate protein names: Signal Peptide Protein; Cytochrome; Cytochrome C Soxe Homolog; Cytochrome C

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MTLAPRYLRGVVAGFCVAPSLALAQPASAPAGPAEAGKLTVEAQAARTMQARNLAASCAVCHGTDGKPPADGPIPRLAGR
QQADLVELMFNFKNGKRSGTVMPQIAKGYSDAQILAMAAWFADQK

Sequences:

>Translated_125_residues
MTLAPRYLRGVVAGFCVAPSLALAQPASAPAGPAEAGKLTVEAQAARTMQARNLAASCAVCHGTDGKPPADGPIPRLAGR
QQADLVELMFNFKNGKRSGTVMPQIAKGYSDAQILAMAAWFADQK
>Mature_124_residues
TLAPRYLRGVVAGFCVAPSLALAQPASAPAGPAEAGKLTVEAQAARTMQARNLAASCAVCHGTDGKPPADGPIPRLAGRQ
QADLVELMFNFKNGKRSGTVMPQIAKGYSDAQILAMAAWFADQK

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12967; Mature: 12836

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLAPRYLRGVVAGFCVAPSLALAQPASAPAGPAEAGKLTVEAQAARTMQARNLAASCAV
CCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHE
CHGTDGKPPADGPIPRLAGRQQADLVELMFNFKNGKRSGTVMPQIAKGYSDAQILAMAAW
EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHHH
FADQK
HHCCC
>Mature Secondary Structure 
TLAPRYLRGVVAGFCVAPSLALAQPASAPAGPAEAGKLTVEAQAARTMQARNLAASCAV
CCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHE
CHGTDGKPPADGPIPRLAGRQQADLVELMFNFKNGKRSGTVMPQIAKGYSDAQILAMAAW
EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHHH
FADQK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA