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The map label for this gene is 94312210

Identifier: 94312210

GI number: 94312210

Start: 3554375

End: 3555208

Strand: Reverse

Name: 94312210

Synonym: Rmet_3279

Alternate gene names: NA

Gene position: 3555208-3554375 (Counterclockwise)

Preceding gene: 94312211

Following gene: 94312209

Centisome position: 90.51

GC content: 67.27

Gene sequence:

>834_bases
ATGGTGACCCCGACTCCAGTCGGCGAAGCCGACCTCCATGCATACGCGGACGGCCAGTTAAGCGGCCCGCGCCGGGCCGA
AGTCGAAGCCTTCCTGGCAGCCGATCCGGAGGCCGCGCGCAAGGTCGAGGCCTGGCGTCGCCAAACGGCGGGGCTGCACG
CATCATTGAACGCCGTCCTCAAGGAGGCGGTACCGCTGGACGCGCTTCCACGCGGATTGCGCGCCGGCAGCGGGCGCACA
AAGGCTCACCGCCCGCTCTGGCCCGTGGCGCTAGCGCTGGCCGCCAGCGTCGCGACATTCATCATCGGTGGCACGAGCGG
CTGGATGGCGCGTGGCCGTTTTGACGCCGACCTGGGTGGCGTGCCTCCACTCGAACGATTTGCGCGCGACGCATTGGCCA
GCCATGTGGTTTATGCGCCCGAGGTTCGCCATGTGGTCGAGGTTCCCGCCAGCGATGAGGCGCATATGGTCGCCTGGCTG
TCCAAGCGGCTCGGTGCGCCGCTGCAGGTCCCTGATCTCCGCGCACAAGGCTTTCGCCTGATCGGCGGGCGGCTCGGTGT
GGCTGAGGGCGGTCCGATGGCTATCCTGATGTATGAGAATGACGCCGGGACACGCCTGTCGCTGCAACTGCGGCGGATGG
CGCAAGGGACACCGGATACCGCATTCCGGCTCGAACGGCTGGCGCCTGCCCAGGGTGCTCAATCCACCGGGCCCGCTGCC
ATGGCGTTTTACTGGGTCGATCACAATCTCGGCTTCGCACTGGCGGGGCCGATCGATCGTGAGCGGCTGCTGGCACTGGC
GACTGCCGTCTATCAGCAATACCAACGGGGATAA

Upstream 100 bases:

>100_bases
TGATGTCGCGCCTGGCGCGCGCTCGCGAACATATGCGTCGCCTGCTGGATGGCGGCGCCGATGGTGCTGCGGCAACAACT
TCGTTGCAGCGGGTGAAATG

Downstream 100 bases:

>100_bases
TCGCACTGCCGCACCTTTCAGCAGTCTTCCCTGTCAAACTCCCCAGGCTCCATCAGGCTTCGTACGAACCATGCTGATTC
CCTCTCCGAAATGGCTGCGC

Product: putative transmembrane transcriptional regulator (anti-sigma factor)

Products: NA

Alternate protein names: Transmembrane Transcriptional Regulator; Transmembrane Regulator; Transmembrane Regulator PrtR; Anti-Sigma Factor; Transmembrane Protein; PrtR Transmembrane Transcriptional Regulator; Transcriptional Regulator; Transmembrane Activator Of PrtI; Sigma Factor Regulator PrtR; Transmembrane Transcription Regulator; Transmembrane Regulatory Protein

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MVTPTPVGEADLHAYADGQLSGPRRAEVEAFLAADPEAARKVEAWRRQTAGLHASLNAVLKEAVPLDALPRGLRAGSGRT
KAHRPLWPVALALAASVATFIIGGTSGWMARGRFDADLGGVPPLERFARDALASHVVYAPEVRHVVEVPASDEAHMVAWL
SKRLGAPLQVPDLRAQGFRLIGGRLGVAEGGPMAILMYENDAGTRLSLQLRRMAQGTPDTAFRLERLAPAQGAQSTGPAA
MAFYWVDHNLGFALAGPIDRERLLALATAVYQQYQRG

Sequences:

>Translated_277_residues
MVTPTPVGEADLHAYADGQLSGPRRAEVEAFLAADPEAARKVEAWRRQTAGLHASLNAVLKEAVPLDALPRGLRAGSGRT
KAHRPLWPVALALAASVATFIIGGTSGWMARGRFDADLGGVPPLERFARDALASHVVYAPEVRHVVEVPASDEAHMVAWL
SKRLGAPLQVPDLRAQGFRLIGGRLGVAEGGPMAILMYENDAGTRLSLQLRRMAQGTPDTAFRLERLAPAQGAQSTGPAA
MAFYWVDHNLGFALAGPIDRERLLALATAVYQQYQRG
>Mature_277_residues
MVTPTPVGEADLHAYADGQLSGPRRAEVEAFLAADPEAARKVEAWRRQTAGLHASLNAVLKEAVPLDALPRGLRAGSGRT
KAHRPLWPVALALAASVATFIIGGTSGWMARGRFDADLGGVPPLERFARDALASHVVYAPEVRHVVEVPASDEAHMVAWL
SKRLGAPLQVPDLRAQGFRLIGGRLGVAEGGPMAILMYENDAGTRLSLQLRRMAQGTPDTAFRLERLAPAQGAQSTGPAA
MAFYWVDHNLGFALAGPIDRERLLALATAVYQQYQRG

Specific function: Unknown

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29634; Mature: 29634

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTPTPVGEADLHAYADGQLSGPRRAEVEAFLAADPEAARKVEAWRRQTAGLHASLNAVL
CCCCCCCCCCCCEEECCCCCCCCCHHHHHHEECCCHHHHHHHHHHHHHHCCHHHHHHHHH
KEAVPLDALPRGLRAGSGRTKAHRPLWPVALALAASVATFIIGGTSGWMARGRFDADLGG
HHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCC
VPPLERFARDALASHVVYAPEVRHVVEVPASDEAHMVAWLSKRLGAPLQVPDLRAQGFRL
CCHHHHHHHHHHHHHCEECCCHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEE
IGGRLGVAEGGPMAILMYENDAGTRLSLQLRRMAQGTPDTAFRLERLAPAQGAQSTGPAA
ECCEECCCCCCCEEEEEEECCCCCEEHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCE
MAFYWVDHNLGFALAGPIDRERLLALATAVYQQYQRG
EEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVTPTPVGEADLHAYADGQLSGPRRAEVEAFLAADPEAARKVEAWRRQTAGLHASLNAVL
CCCCCCCCCCCCEEECCCCCCCCCHHHHHHEECCCHHHHHHHHHHHHHHCCHHHHHHHHH
KEAVPLDALPRGLRAGSGRTKAHRPLWPVALALAASVATFIIGGTSGWMARGRFDADLGG
HHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCC
VPPLERFARDALASHVVYAPEVRHVVEVPASDEAHMVAWLSKRLGAPLQVPDLRAQGFRL
CCHHHHHHHHHHHHHCEECCCHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEE
IGGRLGVAEGGPMAILMYENDAGTRLSLQLRRMAQGTPDTAFRLERLAPAQGAQSTGPAA
ECCEECCCCCCCEEEEEEECCCCCEEHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCE
MAFYWVDHNLGFALAGPIDRERLLALATAVYQQYQRG
EEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA