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The map label for this gene is rlpB

Identifier: 94311904

GI number: 94311904

Start: 3230209

End: 3230724

Strand: Reverse

Name: rlpB

Synonym: Rmet_2972

Alternate gene names: NA

Gene position: 3230724-3230209 (Counterclockwise)

Preceding gene: 94311905

Following gene: 94311903

Centisome position: 82.25

GC content: 62.02

Gene sequence:

>516_bases
ATGGATCGACCGAACATGGGACGCCGCGGTTTCTTCGCCATCGGCGCCGCGGCAGCGGCGGCGGCATTGCTGGGTGGCTG
CGGCTTCCATATGCGCGGTAACGCCGATTTTGCGTTCAAGCGGCTCTACATCGGCATTCCCGCGAATTCGCTGATGGGTG
CGGATTTGCGCCGCAACATCCGCAATGGCTCGGACACGCAGATCGTTACCGACCCGAAGGAAGCGGACGCACTGCTCGAC
GTGCTGGCCGATACGCGGGCCAAGTCGATCCTCTCGATTACCACCGAGGGTGTGGTGCGGGAATACCGTCTGACCTACCG
CTTTACCTTCCGCCTGCGCGATGCCAGTGGCAAGGAGCTGATCCCACCGTCGACGCTGCTGCTGACGCGCGACCTGACGT
ACAACGAAGCCAACACGCTGGCCAAGGATTACGAAGAGCAGCAGCTCTATCGCGACATGCAGCGCGATGTTGTGAATCAG
CTCATGCGCCGGCTGGCCTCGGTCAAGACGATCTGA

Upstream 100 bases:

>100_bases
CGCCGGTGCCGCACCGAAGAAGATCGTGGTGGTGCCGGGCCGTCTCGTCAACGTCGTGCTCTGAAGCACGCGGACTGGAA
TCAGCAGACAGGGATAACGA

Downstream 100 bases:

>100_bases
CGCGCCGGGTATCGGCGCGACTCAGGCCGACACAGGAAACATAGGGCGACAATGCAGCTCAAGCTCGACGGACTCGAGGC
ACATCTGAGGCAGGCGCAGG

Product: rare lipoprotein B

Products: NA

Alternate protein names: Lipoprotein; Lipoprotein B; Lipoprotein B Transmembrane; Lipoprotein B Transmembrane; Rare Lipoprotein B Family; Lipoprotein B Transmembrane Protein

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MDRPNMGRRGFFAIGAAAAAAALLGGCGFHMRGNADFAFKRLYIGIPANSLMGADLRRNIRNGSDTQIVTDPKEADALLD
VLADTRAKSILSITTEGVVREYRLTYRFTFRLRDASGKELIPPSTLLLTRDLTYNEANTLAKDYEEQQLYRDMQRDVVNQ
LMRRLASVKTI

Sequences:

>Translated_171_residues
MDRPNMGRRGFFAIGAAAAAAALLGGCGFHMRGNADFAFKRLYIGIPANSLMGADLRRNIRNGSDTQIVTDPKEADALLD
VLADTRAKSILSITTEGVVREYRLTYRFTFRLRDASGKELIPPSTLLLTRDLTYNEANTLAKDYEEQQLYRDMQRDVVNQ
LMRRLASVKTI
>Mature_171_residues
MDRPNMGRRGFFAIGAAAAAAALLGGCGFHMRGNADFAFKRLYIGIPANSLMGADLRRNIRNGSDTQIVTDPKEADALLD
VLADTRAKSILSITTEGVVREYRLTYRFTFRLRDASGKELIPPSTLLLTRDLTYNEANTLAKDYEEQQLYRDMQRDVVNQ
LMRRLASVKTI

Specific function: Unknown

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19135; Mature: 19135

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRPNMGRRGFFAIGAAAAAAALLGGCGFHMRGNADFAFKRLYIGIPANSLMGADLRRNI
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEEEECCCCHHHHHHHHHHC
RNGSDTQIVTDPKEADALLDVLADTRAKSILSITTEGVVREYRLTYRFTFRLRDASGKEL
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCC
IPPSTLLLTRDLTYNEANTLAKDYEEQQLYRDMQRDVVNQLMRRLASVKTI
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDRPNMGRRGFFAIGAAAAAAALLGGCGFHMRGNADFAFKRLYIGIPANSLMGADLRRNI
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEEEECCCCHHHHHHHHHHC
RNGSDTQIVTDPKEADALLDVLADTRAKSILSITTEGVVREYRLTYRFTFRLRDASGKEL
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCC
IPPSTLLLTRDLTYNEANTLAKDYEEQQLYRDMQRDVVNQLMRRLASVKTI
CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA