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The map label for this gene is clpS [H]

Identifier: 94311825

GI number: 94311825

Start: 3149398

End: 3149724

Strand: Reverse

Name: clpS [H]

Synonym: Rmet_2893

Alternate gene names: 94311825

Gene position: 3149724-3149398 (Counterclockwise)

Preceding gene: 94311827

Following gene: 94311824

Centisome position: 80.18

GC content: 59.63

Gene sequence:

>327_bases
ATGGCGACACGGCTGGCGAACACCCCCCAACGCGAAACAGGCACTGTCATCGAACGGAAGGAGCAGCAGCTCAAGCCGCC
GGCGATGTACAAGGTGGTCCTGCTCAACGACGACTACACTCCGATGGAGTTCGTCGTGATGATCCTGCAGCAGTATTTCA
GCAGGGACCGGGAAACGGCGACGCAGATCATGCTGACCGTCCACCGGGAAGGTAAGGGCGTTTGTGGTATCTATACGCGT
GATATCGCGGCGACCAAAGTCGAGCTTGTATCAACCCATGCGCGGCAGGCGGGGCACCCGCTGCAGTGCGTGATGGAGGA
AGCATGA

Upstream 100 bases:

>100_bases
TGTGTGGCGGGCCACGCAGAGAATTTACCGGGTGCGGGGCTTGAATAACAGCCCAGTTCCCCAAATTGCAGACTTGTGAA
CAAGGGTTAGAATAAAAGCC

Downstream 100 bases:

>100_bases
TTGCGCAAGAATTGGAAGTGAGCCTGCACATGGCCTTCGTCGAGGCTCGCCAGGCGCGCCACGAGTTCATCACCGTGGAA
CACCTGCTGCTGGCGTTGCT

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MATRLANTPQRETGTVIERKEQQLKPPAMYKVVLLNDDYTPMEFVVMILQQYFSRDRETATQIMLTVHREGKGVCGIYTR
DIAATKVELVSTHARQAGHPLQCVMEEA

Sequences:

>Translated_108_residues
MATRLANTPQRETGTVIERKEQQLKPPAMYKVVLLNDDYTPMEFVVMILQQYFSRDRETATQIMLTVHREGKGVCGIYTR
DIAATKVELVSTHARQAGHPLQCVMEEA
>Mature_107_residues
ATRLANTPQRETGTVIERKEQQLKPPAMYKVVLLNDDYTPMEFVVMILQQYFSRDRETATQIMLTVHREGKGVCGIYTRD
IAATKVELVSTHARQAGHPLQCVMEEA

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=91, Percent_Identity=56.043956043956, Blast_Score=122, Evalue=6e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 12295; Mature: 12164

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATRLANTPQRETGTVIERKEQQLKPPAMYKVVLLNDDYTPMEFVVMILQQYFSRDRETA
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHH
TQIMLTVHREGKGVCGIYTRDIAATKVELVSTHARQAGHPLQCVMEEA
HHHHEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHCCCC
>Mature Secondary Structure 
ATRLANTPQRETGTVIERKEQQLKPPAMYKVVLLNDDYTPMEFVVMILQQYFSRDRETA
CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCHHHH
TQIMLTVHREGKGVCGIYTRDIAATKVELVSTHARQAGHPLQCVMEEA
HHHHEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA