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The map label for this gene is ccoO

Identifier: 94311312

GI number: 94311312

Start: 2587785

End: 2588366

Strand: Direct

Name: ccoO

Synonym: Rmet_2376

Alternate gene names: NA

Gene position: 2587785-2588366 (Clockwise)

Preceding gene: 94311311

Following gene: 94311313

Centisome position: 65.88

GC content: 64.78

Gene sequence:

>582_bases
ATGCTCGTGGTGCTCCCCGGCCTGCAGGTCCGTACGGTCCAGGCACCTGCGCAGTTGCAGAACTACACGATCGAACAGCT
AAGAGGCCGTGCGCAGTACGTGGCCAATGGCTGTGTCTACTGTCACAGCCAGCAGCCTCGTTCGAGTGGCCAGACGCTGG
CGGATCAGGCCCGGGGCTGGGGAAGGCCGTCCACGCCGGGCGACTACGCCTACGACGCTCCCCAACTGCTCGGGACGATG
CGCACCGGCCCCGATTTGCTGAATGTCGGGGTGCGCCTGCCGAGCCGGGACTGGCAATTGACCCACCTGTACCAGCCCAG
GGCCATCTTCGACTGGAGCATCATGCCTTCGTACCCCTTCCTCTTCGAGGTCAAGGAGAAGGCCGCGCCCGGCGAGGTCG
TGGTCAAGTTGCCGCAGGAGTACCGTCCCGCGGACGGGAAAGTGGTGGTGGCCCGACAGGAGGCGCTCGACCTGGTCGCG
TACCTGTTGAGCCTGGACCGTTCCTACCCCGTCAGCGCCAAAGAGGCGACATTGCGTGATCGTGGCTACGATCCGAAAAC
TCAGAAGGGCCCGCGTCAATGA

Upstream 100 bases:

>100_bases
ATGCGATGGCCCTACTCTGGTCGAAACGGCGAGGTGACGCATGAACCGGCTGATTCCATTGTTCGTCGGCGCTGTCGGAA
TCTTGGTGTTCGCGACCGTC

Downstream 100 bases:

>100_bases
GGGGCGAGATGAAATCCGAGCTGAGCGGCAAGGGGCGTCGTGTTCAAGACGTAGACCCGACATTCGACCCCTGGGAGCAA
TCGCGTCCCATTCCCTTGTT

Product: cytochrome C oxidase, mono-heme subunit

Products: NA

Alternate protein names: Cbb3-Type Cytochrome C Oxidase Subunit II; Cytochrome C Oxidase Mono-Heme Subunit/FixO; Cytochrome C Oxidase Cbb3-Type Subunit I; Cbb3-Type Cytochrome Oxidase Cytochrome C Subunit; Cb-Type Cytochrome C Oxidase Subunit II; Bifunctional Cbb3-Type Cytochrome C Oxidase Subunit I/II; Cytochrome C Oxidase; Cytochrome-C Oxidase FixO Chain; Cytochrome C Oxidase Subunit CcoO; Cytochrome Oxidase Cytochrome C Subunit; Cytochrome Oxidase Subunit; Cytochrome C Oxidase Subunit; Cytochrome C Oxidase Mono-Heme Subunit/FixO Superfamily; Cytochrome C Oxidase Mono-Heme Subunit/Fixo; Cytochrome-C Oxidase Subunit II; Bifunctional Cytochrome C Oxidase Subunit SccoN/O; Cytochrome-Cbb3 Oxidase Subunit I; Transmembrane Cytochrome C Oxidase FixO Protein; Cbb3-Type Cytochrome Oxidase; Cbb3-Type Cytochrome C Oxidase Subunit CcoO; Cbb3-Type Cytochrome C Oxidase Subunit I + II; Cytochrome Oxidase; Cytochrome C Oxidase Mono-Heme Subunit; Cytochrome C Oxidase Cbb3-Type; Cytochrome C Oxidase Cbb3-Type Mono-Heme Subunit II; Cytochrome Cbb3 Oxidase Subunit I/III; Cytochrome C Oxidase Subunit CcoN; Cytochrome C Oxidase Family Protein; Cytochrome C Oxidase Cbb3-Type Subunit I/Mono-Heme Subunit; Cytochrome C Oxidase FixO Chain; Cytochrome C Family Protein; Cytochrome C Oxidase CcoO Subunit; Cbb3-Type Cytochrome C Oxidase Subunits CcoN/CcoO; Cytochrome C Oxidase Cbb3-Type Subunit I And II

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MLVVLPGLQVRTVQAPAQLQNYTIEQLRGRAQYVANGCVYCHSQQPRSSGQTLADQARGWGRPSTPGDYAYDAPQLLGTM
RTGPDLLNVGVRLPSRDWQLTHLYQPRAIFDWSIMPSYPFLFEVKEKAAPGEVVVKLPQEYRPADGKVVVARQEALDLVA
YLLSLDRSYPVSAKEATLRDRGYDPKTQKGPRQ

Sequences:

>Translated_193_residues
MLVVLPGLQVRTVQAPAQLQNYTIEQLRGRAQYVANGCVYCHSQQPRSSGQTLADQARGWGRPSTPGDYAYDAPQLLGTM
RTGPDLLNVGVRLPSRDWQLTHLYQPRAIFDWSIMPSYPFLFEVKEKAAPGEVVVKLPQEYRPADGKVVVARQEALDLVA
YLLSLDRSYPVSAKEATLRDRGYDPKTQKGPRQ
>Mature_193_residues
MLVVLPGLQVRTVQAPAQLQNYTIEQLRGRAQYVANGCVYCHSQQPRSSGQTLADQARGWGRPSTPGDYAYDAPQLLGTM
RTGPDLLNVGVRLPSRDWQLTHLYQPRAIFDWSIMPSYPFLFEVKEKAAPGEVVVKLPQEYRPADGKVVVARQEALDLVA
YLLSLDRSYPVSAKEATLRDRGYDPKTQKGPRQ

Specific function: Unknown

COG id: COG2993

COG function: function code C; Cbb3-type cytochrome oxidase, cytochrome c subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21614; Mature: 21614

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVVLPGLQVRTVQAPAQLQNYTIEQLRGRAQYVANGCVYCHSQQPRSSGQTLADQARGW
CEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHCC
GRPSTPGDYAYDAPQLLGTMRTGPDLLNVGVRLPSRDWQLTHLYQPRAIFDWSIMPSYPF
CCCCCCCCCCCCCHHHHHHHCCCCCCEECCEECCCCCCEEEEEECCCEEEEEECCCCCCE
LFEVKEKAAPGEVVVKLPQEYRPADGKVVVARQEALDLVAYLLSLDRSYPVSAKEATLRD
EEEECCCCCCCCEEEECCHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
RGYDPKTQKGPRQ
CCCCCCCCCCCCC
>Mature Secondary Structure
MLVVLPGLQVRTVQAPAQLQNYTIEQLRGRAQYVANGCVYCHSQQPRSSGQTLADQARGW
CEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHCC
GRPSTPGDYAYDAPQLLGTMRTGPDLLNVGVRLPSRDWQLTHLYQPRAIFDWSIMPSYPF
CCCCCCCCCCCCCHHHHHHHCCCCCCEECCEECCCCCCEEEEEECCCEEEEEECCCCCCE
LFEVKEKAAPGEVVVKLPQEYRPADGKVVVARQEALDLVAYLLSLDRSYPVSAKEATLRD
EEEECCCCCCCCEEEECCHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
RGYDPKTQKGPRQ
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA