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The map label for this gene is 94311313

Identifier: 94311313

GI number: 94311313

Start: 2588507

End: 2589181

Strand: Direct

Name: 94311313

Synonym: Rmet_2377

Alternate gene names: NA

Gene position: 2588507-2589181 (Clockwise)

Preceding gene: 94311312

Following gene: 94311314

Centisome position: 65.9

GC content: 65.04

Gene sequence:

>675_bases
TTGAGCTACATCGCCGACCTGGCGCCGAATCGCGGGGCGGCGATTGGCGGGACCGTTGCGCCGAAGCAGCAGGCGCCCGC
AGTTCCCGATGACGCGCCGGTGCTCGTCTTTCAGGGCAACGACATCGTCTGGGCCTGCGCGTCATGTCACGGCGACCACG
GTGCTGGCGCGGGGCTGACGCCCGCGCTGGCCGGCCTGTCCGAAGCCTACATCGCGAAGCAACTCCACGACTTCGCTACC
GGAAGCCGCCCCAACGAGTCCATGCGGTACGTGGCCAGTGCAATGAGCGCCGAGGAGATCGGGCAAGTCTCGGCCTATTA
CGCTGCGCTGCCGCACGTTGCCGGGCCGCCCGTCGATCTGGGCGGAGACGCGGCGCGTGGAGAGGCACTGAGCCGAACGG
GCGACTGGAAAAAGGATATCCCGGCGTGCGTGACCTGTCATGGCCAGCAGGGTGAGGGTGTCGGCGGCCATTTCCCTGCG
CTGGCGGGTCAGCAGCCCGAGTACATCTTCCACCAGTTGGTCTCATGGAAAGGCGGCCATCGCCACAATTCGCCGCAATC
CTTGATGGATGACATCGCGTCGCGCATGTCGGACCAAGACATGCGCGATGTGGCTCAGTATTTCGGATCTTTGCGTCCGG
GCAGCAAAGGAGGCAATCATGACGAACAACGGTGA

Upstream 100 bases:

>100_bases
TGTTCAAGACGTAGACCCGACATTCGACCCCTGGGAGCAATCGCGTCCCATTCCCTTGTTTGTGCTGGCCATCTTCCTGG
CGCTGGCGATCTGGGGCGCT

Downstream 100 bases:

>100_bases
TCGCCGCTCTGCGCACACGGGGACACTCCGGCGTGCCGGTTATGCTGCGGCGCTGGGTCTCCTGCTGTTTTCGGCAGGTT
ACGGCGTCTACGAGAGCGGC

Product: putative cytochrome c4

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MSYIADLAPNRGAAIGGTVAPKQQAPAVPDDAPVLVFQGNDIVWACASCHGDHGAGAGLTPALAGLSEAYIAKQLHDFAT
GSRPNESMRYVASAMSAEEIGQVSAYYAALPHVAGPPVDLGGDAARGEALSRTGDWKKDIPACVTCHGQQGEGVGGHFPA
LAGQQPEYIFHQLVSWKGGHRHNSPQSLMDDIASRMSDQDMRDVAQYFGSLRPGSKGGNHDEQR

Sequences:

>Translated_224_residues
MSYIADLAPNRGAAIGGTVAPKQQAPAVPDDAPVLVFQGNDIVWACASCHGDHGAGAGLTPALAGLSEAYIAKQLHDFAT
GSRPNESMRYVASAMSAEEIGQVSAYYAALPHVAGPPVDLGGDAARGEALSRTGDWKKDIPACVTCHGQQGEGVGGHFPA
LAGQQPEYIFHQLVSWKGGHRHNSPQSLMDDIASRMSDQDMRDVAQYFGSLRPGSKGGNHDEQR
>Mature_223_residues
SYIADLAPNRGAAIGGTVAPKQQAPAVPDDAPVLVFQGNDIVWACASCHGDHGAGAGLTPALAGLSEAYIAKQLHDFATG
SRPNESMRYVASAMSAEEIGQVSAYYAALPHVAGPPVDLGGDAARGEALSRTGDWKKDIPACVTCHGQQGEGVGGHFPAL
AGQQPEYIFHQLVSWKGGHRHNSPQSLMDDIASRMSDQDMRDVAQYFGSLRPGSKGGNHDEQR

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor in an anaerobic electron transport chain [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 23488; Mature: 23357

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYIADLAPNRGAAIGGTVAPKQQAPAVPDDAPVLVFQGNDIVWACASCHGDHGAGAGLT
CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCH
PALAGLSEAYIAKQLHDFATGSRPNESMRYVASAMSAEEIGQVSAYYAALPHVAGPPVDL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCC
GGDAARGEALSRTGDWKKDIPACVTCHGQQGEGVGGHFPALAGQQPEYIFHQLVSWKGGH
CCCCHHCHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
RHNSPQSLMDDIASRMSDQDMRDVAQYFGSLRPGSKGGNHDEQR
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SYIADLAPNRGAAIGGTVAPKQQAPAVPDDAPVLVFQGNDIVWACASCHGDHGAGAGLT
CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCH
PALAGLSEAYIAKQLHDFATGSRPNESMRYVASAMSAEEIGQVSAYYAALPHVAGPPVDL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCC
GGDAARGEALSRTGDWKKDIPACVTCHGQQGEGVGGHFPALAGQQPEYIFHQLVSWKGGH
CCCCHHCHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
RHNSPQSLMDDIASRMSDQDMRDVAQYFGSLRPGSKGGNHDEQR
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA