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The map label for this gene is ccoN [H]

Identifier: 94311311

GI number: 94311311

Start: 2586172

End: 2587728

Strand: Direct

Name: ccoN [H]

Synonym: Rmet_2375

Alternate gene names: 94311311

Gene position: 2586172-2587728 (Clockwise)

Preceding gene: 94311310

Following gene: 94311312

Centisome position: 65.84

GC content: 60.44

Gene sequence:

>1557_bases
ATGAATGAAAGCCTAGGGTTTCTCCTTGCTCTGAGCTTTATCGTCTCGCTGGCGGCTCTGGGCGCGTTGATCTGGTCCAT
CGTGACGCGCCAGATCCATGCGGGAAAGAAGGAGGCTTCGACCATATTTCTGGAGGGCGAGGCCGGCTCCCCGGATGATC
CATCTTCATTCGATGAAGGGGCGGCCGAGCATCGATTCGACGCCTTGCGTGCCGGCGTCGACGCCCCGGGTCGGAACGTC
GTACTGGTCCTGTCCATCGCTTCCTTCCTGTTCCTGATCGTTGGCTCGCTGTTCGGGATGATCGCCTCGCTGAAGTTGCA
CTGGCCCGACTGGCTGGCGAGTCAGGCGTTCACCACCTTCGGGCGCGCGCGCACCGTCCATCTGAATCTGGTCGCGTACG
GCTGGCTGTCCACAGGGGGCATAGCGGTCGCGCTCTGGATCATCCCTCGCATGTTTCATACGCCCCTGCGAAGGCCCGCA
ATGGCGATGGTGGGCGCGGTGCTGTGGGCCCTCGGCGTGGCGGCCGGTGCCATTGCCATTGCCAATGGATGGAGCGACGG
CCTGGAGTGGCTCGAAATCCCATGGCAGATCGACATCGTCCTGGCCCTCGGCGGCTTCTTCATCGCATGGTCCGCCATCG
CGACGACCCGAAAACGCAACGTTCACCACATCTACGTCAGCGGCTGGTACTACCTCGCGGGACTGGCATGGTTCCCCATT
CTGTTCTTCATCGCGAATATCCCGGGCCTGCATTCAGGCGTGCAGCAAGCCACCACCAACTGGTGGTTCGCGCATAACGT
GCTTGGCCTCTGGCTGACACCGCTGGGGCTGGGTGCTGCCTATTACCTGATTCCCAAGATCATCGGCAAGCCGATCTATT
CGTATAGCGTTTCGCTGCTGGGCTTCTGGGGCCTTGCCTTGTTCTACAGCCAGGTGGGTATTCATCACCTGATCGGTGGG
CCCGTGCCGACGTGGGTGGTCACGCTGTCGATCGTGCACAGCGTCATGATGTTCATTCCTGTCATCGCGGTGGCGATCAA
TCAGCACGTGACGGTCGCGCAGAATTTCTGGGCGTTCAAGGAGTCCATGGCGCTGCGCTTCGTGTCCACGGGCGCATTGA
TGTACACGGCCGCATCCTTCCAGGGATCGCTGGAGGCTGTACGGGCCATCAACTCGATCACCCACTTCACGCACTACACG
GTGGGGCATGCGCACCTGGGAGCTTACGCATTCGTCTCCATCGTGCTGTTCGGCGCCTTCTACTATCTCTTGCCCTACCT
GACGGGCAAGAACTGGCCCTGTCCGCGACTCATCGCCATCCACTATTGGCTGACGGTCCTGGGTTTTCTGATCTATTTCC
TGTCATTGACCATCGGCGGTTTCCTGCAAGGCATGTCGCTGCTCGATCCACAGACCAGTTTCGCTGACATCACCCGCAAC
ATCGTGCCGTATCTCGAAGGTCGATCGGTGGGCGGCGGCATGATGACGCTGGGACACTTCGTCTTTGCCTTCCATGCGAT
GGCCCTACTCTGGTCGAAACGGCGAGGTGACGCATGA

Upstream 100 bases:

>100_bases
AAAACAATGCTGAGGCAAGCCCTGATGGAACACTATCGCCAACACCAGTGGTTGGCATCGGAACCAATTCGGATGGTTGC
GCGCCATTTCTGGAGCGCCC

Downstream 100 bases:

>100_bases
ACCGGCTGATTCCATTGTTCGTCGGCGCTGTCGGAATCTTGGTGTTCGCGACCGTCATGCTCGTGGTGCTCCCCGGCCTG
CAGGTCCGTACGGTCCAGGC

Product: cytochrome-c oxidase

Products: NA

Alternate protein names: Cytochrome CBB3 subunit 1; Cytochrome c oxidase polypeptide I homolog; Heme B/copper cytochrome c oxidase subunit [H]

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MNESLGFLLALSFIVSLAALGALIWSIVTRQIHAGKKEASTIFLEGEAGSPDDPSSFDEGAAEHRFDALRAGVDAPGRNV
VLVLSIASFLFLIVGSLFGMIASLKLHWPDWLASQAFTTFGRARTVHLNLVAYGWLSTGGIAVALWIIPRMFHTPLRRPA
MAMVGAVLWALGVAAGAIAIANGWSDGLEWLEIPWQIDIVLALGGFFIAWSAIATTRKRNVHHIYVSGWYYLAGLAWFPI
LFFIANIPGLHSGVQQATTNWWFAHNVLGLWLTPLGLGAAYYLIPKIIGKPIYSYSVSLLGFWGLALFYSQVGIHHLIGG
PVPTWVVTLSIVHSVMMFIPVIAVAINQHVTVAQNFWAFKESMALRFVSTGALMYTAASFQGSLEAVRAINSITHFTHYT
VGHAHLGAYAFVSIVLFGAFYYLLPYLTGKNWPCPRLIAIHYWLTVLGFLIYFLSLTIGGFLQGMSLLDPQTSFADITRN
IVPYLEGRSVGGGMMTLGHFVFAFHAMALLWSKRRGDA

Sequences:

>Translated_518_residues
MNESLGFLLALSFIVSLAALGALIWSIVTRQIHAGKKEASTIFLEGEAGSPDDPSSFDEGAAEHRFDALRAGVDAPGRNV
VLVLSIASFLFLIVGSLFGMIASLKLHWPDWLASQAFTTFGRARTVHLNLVAYGWLSTGGIAVALWIIPRMFHTPLRRPA
MAMVGAVLWALGVAAGAIAIANGWSDGLEWLEIPWQIDIVLALGGFFIAWSAIATTRKRNVHHIYVSGWYYLAGLAWFPI
LFFIANIPGLHSGVQQATTNWWFAHNVLGLWLTPLGLGAAYYLIPKIIGKPIYSYSVSLLGFWGLALFYSQVGIHHLIGG
PVPTWVVTLSIVHSVMMFIPVIAVAINQHVTVAQNFWAFKESMALRFVSTGALMYTAASFQGSLEAVRAINSITHFTHYT
VGHAHLGAYAFVSIVLFGAFYYLLPYLTGKNWPCPRLIAIHYWLTVLGFLIYFLSLTIGGFLQGMSLLDPQTSFADITRN
IVPYLEGRSVGGGMMTLGHFVFAFHAMALLWSKRRGDA
>Mature_518_residues
MNESLGFLLALSFIVSLAALGALIWSIVTRQIHAGKKEASTIFLEGEAGSPDDPSSFDEGAAEHRFDALRAGVDAPGRNV
VLVLSIASFLFLIVGSLFGMIASLKLHWPDWLASQAFTTFGRARTVHLNLVAYGWLSTGGIAVALWIIPRMFHTPLRRPA
MAMVGAVLWALGVAAGAIAIANGWSDGLEWLEIPWQIDIVLALGGFFIAWSAIATTRKRNVHHIYVSGWYYLAGLAWFPI
LFFIANIPGLHSGVQQATTNWWFAHNVLGLWLTPLGLGAAYYLIPKIIGKPIYSYSVSLLGFWGLALFYSQVGIHHLIGG
PVPTWVVTLSIVHSVMMFIPVIAVAINQHVTVAQNFWAFKESMALRFVSTGALMYTAASFQGSLEAVRAINSITHFTHYT
VGHAHLGAYAFVSIVLFGAFYYLLPYLTGKNWPCPRLIAIHYWLTVLGFLIYFLSLTIGGFLQGMSLLDPQTSFADITRN
IVPYLEGRSVGGGMMTLGHFVFAFHAMALLWSKRRGDA

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 56779; Mature: 56779

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS50855 COX1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNESLGFLLALSFIVSLAALGALIWSIVTRQIHAGKKEASTIFLEGEAGSPDDPSSFDEG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCC
AAEHRFDALRAGVDAPGRNVVLVLSIASFLFLIVGSLFGMIASLKLHWPDWLASQAFTTF
HHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GRARTVHLNLVAYGWLSTGGIAVALWIIPRMFHTPLRRPAMAMVGAVLWALGVAAGAIAI
CCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHE
ANGWSDGLEWLEIPWQIDIVLALGGFFIAWSAIATTRKRNVHHIYVSGWYYLAGLAWFPI
ECCCHHCHHHEECCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHH
LFFIANIPGLHSGVQQATTNWWFAHNVLGLWLTPLGLGAAYYLIPKIIGKPIYSYSVSLL
HHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
GFWGLALFYSQVGIHHLIGGPVPTWVVTLSIVHSVMMFIPVIAVAINQHVTVAQNFWAFK
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ESMALRFVSTGALMYTAASFQGSLEAVRAINSITHFTHYTVGHAHLGAYAFVSIVLFGAF
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
YYLLPYLTGKNWPCPRLIAIHYWLTVLGFLIYFLSLTIGGFLQGMSLLDPQTSFADITRN
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHH
IVPYLEGRSVGGGMMTLGHFVFAFHAMALLWSKRRGDA
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNESLGFLLALSFIVSLAALGALIWSIVTRQIHAGKKEASTIFLEGEAGSPDDPSSFDEG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCC
AAEHRFDALRAGVDAPGRNVVLVLSIASFLFLIVGSLFGMIASLKLHWPDWLASQAFTTF
HHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GRARTVHLNLVAYGWLSTGGIAVALWIIPRMFHTPLRRPAMAMVGAVLWALGVAAGAIAI
CCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHE
ANGWSDGLEWLEIPWQIDIVLALGGFFIAWSAIATTRKRNVHHIYVSGWYYLAGLAWFPI
ECCCHHCHHHEECCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHH
LFFIANIPGLHSGVQQATTNWWFAHNVLGLWLTPLGLGAAYYLIPKIIGKPIYSYSVSLL
HHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
GFWGLALFYSQVGIHHLIGGPVPTWVVTLSIVHSVMMFIPVIAVAINQHVTVAQNFWAFK
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ESMALRFVSTGALMYTAASFQGSLEAVRAINSITHFTHYTVGHAHLGAYAFVSIVLFGAF
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
YYLLPYLTGKNWPCPRLIAIHYWLTVLGFLIYFLSLTIGGFLQGMSLLDPQTSFADITRN
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHH
IVPYLEGRSVGGGMMTLGHFVFAFHAMALLWSKRRGDA
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]