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The map label for this gene is yclJ [H]

Identifier: 94310118

GI number: 94310118

Start: 1284117

End: 1284917

Strand: Direct

Name: yclJ [H]

Synonym: Rmet_1173

Alternate gene names: 94310118

Gene position: 1284117-1284917 (Clockwise)

Preceding gene: 94310116

Following gene: 94310119

Centisome position: 32.69

GC content: 65.92

Gene sequence:

>801_bases
ATGGCGGATTTCTGCACAATAGAGCCAGTTCAGAACCGAGGGCCAAGCCGCCGCACCATGGAACACGCCAAACGCATCCT
GCTGGTCGAAGACGATGTCGGTATCGCCAACGTGCTGGCCATGCACCTGCGCGACGAGCGCTACGAAGTCGTGCATAGCG
CCGATGGCGCCGAGGGGCTGCGCCTGCTGGAGCAGGGCGGTTGGGATGCGCTGGTGCTGGACCTGATGCTGCCCGGCGTG
GATGGTCTCGAGATCTGCCGCCGGGCCCGGGCGATGACGCGCTACACGCCGATCATCATCACCAGCGCGCGTTCCAGCGA
GGTGCATCGCATCCTGGGGCTCGAACTCGGTGCCGACGACTATCTGGCCAAGCCGTTCTCGGTGCTGGAGCTGGTGGCGC
GCGTCAAGGCGCTGCTGCGTCGAGTGGAGGCAATGGCGCGCGATGTGCGGGCCGATGCCGGCAGTCTGGAGCTGGCCGGA
CTGGCCATTGATCCTCTCGCGCGAGAGGCCGCTGTCGACGGCAAGCGCCTCGACCTGACCCCGCGCGAGTTCGACCTGCT
GTACTACTTCGCGCGCCATCCGGACAAGGTGTTCTCCCGCATGGACTTGCTCAACGCGGTGTGGGGCTACCAGCACGAGG
GTTACGAGCACACGGTGAACACGCATATCAACCGGCTGCGCACCAAGATCGAGGTCGATCCGGCGCAGCCGAAGCGCATC
CTGACTGTGTGGCGGCGCGGCTATCGGTTCGTGGCCGATCCGCAAGCCGACGCCGCGCAGGACGAAGGGGAAGCATCGTG
A

Upstream 100 bases:

>100_bases
GCGCATGGTGGTCTCCGTGCTCGGGATGGGTTGAACGCATGGTAGGCAACCATCCATGGCGGAGTCCTCGCCAAACCTTA
AACAATTCGTGATAACTGGA

Downstream 100 bases:

>100_bases
ACCTGTCCCTGACACAACGGCTGTCCGCCGTTTTCGCCGCGTTGTTGCTGGCCTGCTGCGGGGCCTCCGCCTGGCTGCAG
GTGCGGGCCAACGCGATGCA

Product: winged helix family two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MADFCTIEPVQNRGPSRRTMEHAKRILLVEDDVGIANVLAMHLRDERYEVVHSADGAEGLRLLEQGGWDALVLDLMLPGV
DGLEICRRARAMTRYTPIIITSARSSEVHRILGLELGADDYLAKPFSVLELVARVKALLRRVEAMARDVRADAGSLELAG
LAIDPLAREAAVDGKRLDLTPREFDLLYYFARHPDKVFSRMDLLNAVWGYQHEGYEHTVNTHINRLRTKIEVDPAQPKRI
LTVWRRGYRFVADPQADAAQDEGEAS

Sequences:

>Translated_266_residues
MADFCTIEPVQNRGPSRRTMEHAKRILLVEDDVGIANVLAMHLRDERYEVVHSADGAEGLRLLEQGGWDALVLDLMLPGV
DGLEICRRARAMTRYTPIIITSARSSEVHRILGLELGADDYLAKPFSVLELVARVKALLRRVEAMARDVRADAGSLELAG
LAIDPLAREAAVDGKRLDLTPREFDLLYYFARHPDKVFSRMDLLNAVWGYQHEGYEHTVNTHINRLRTKIEVDPAQPKRI
LTVWRRGYRFVADPQADAAQDEGEAS
>Mature_265_residues
ADFCTIEPVQNRGPSRRTMEHAKRILLVEDDVGIANVLAMHLRDERYEVVHSADGAEGLRLLEQGGWDALVLDLMLPGVD
GLEICRRARAMTRYTPIIITSARSSEVHRILGLELGADDYLAKPFSVLELVARVKALLRRVEAMARDVRADAGSLELAGL
AIDPLAREAAVDGKRLDLTPREFDLLYYFARHPDKVFSRMDLLNAVWGYQHEGYEHTVNTHINRLRTKIEVDPAQPKRIL
TVWRRGYRFVADPQADAAQDEGEAS

Specific function: Could be member of the two-component regulatory system yclK/yclJ [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=235, Percent_Identity=37.8723404255319, Blast_Score=162, Evalue=1e-41,
Organism=Escherichia coli, GI1786599, Length=231, Percent_Identity=38.961038961039, Blast_Score=157, Evalue=6e-40,
Organism=Escherichia coli, GI1788394, Length=233, Percent_Identity=41.2017167381974, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI1786784, Length=232, Percent_Identity=36.6379310344828, Blast_Score=140, Evalue=7e-35,
Organism=Escherichia coli, GI87082012, Length=228, Percent_Identity=35.9649122807018, Blast_Score=136, Evalue=1e-33,
Organism=Escherichia coli, GI1790860, Length=206, Percent_Identity=39.8058252427184, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI2367329, Length=231, Percent_Identity=39.8268398268398, Blast_Score=131, Evalue=5e-32,
Organism=Escherichia coli, GI1790863, Length=231, Percent_Identity=34.1991341991342, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1789402, Length=209, Percent_Identity=35.8851674641148, Blast_Score=127, Evalue=8e-31,
Organism=Escherichia coli, GI1786911, Length=226, Percent_Identity=35.3982300884956, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1790552, Length=235, Percent_Identity=35.3191489361702, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=30.6034482758621, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1787375, Length=227, Percent_Identity=30.8370044052863, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1787229, Length=232, Percent_Identity=33.6206896551724, Blast_Score=99, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 29965; Mature: 29833

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADFCTIEPVQNRGPSRRTMEHAKRILLVEDDVGIANVLAMHLRDERYEVVHSADGAEGL
CCCCCCCCCHHCCCCCHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHH
RLLEQGGWDALVLDLMLPGVDGLEICRRARAMTRYTPIIITSARSSEVHRILGLELGADD
HHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCH
YLAKPFSVLELVARVKALLRRVEAMARDVRADAGSLELAGLAIDPLAREAAVDGKRLDLT
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECEECCHHHHHHHCCCCEECCC
PREFDLLYYFARHPDKVFSRMDLLNAVWGYQHEGYEHTVNTHINRLRTKIEVDPAQPKRI
CCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEECCCCCCHHH
LTVWRRGYRFVADPQADAAQDEGEAS
HHHHHHCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
ADFCTIEPVQNRGPSRRTMEHAKRILLVEDDVGIANVLAMHLRDERYEVVHSADGAEGL
CCCCCCCCHHCCCCCHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHH
RLLEQGGWDALVLDLMLPGVDGLEICRRARAMTRYTPIIITSARSSEVHRILGLELGADD
HHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCH
YLAKPFSVLELVARVKALLRRVEAMARDVRADAGSLELAGLAIDPLAREAAVDGKRLDLT
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECEECCHHHHHHHCCCCEECCC
PREFDLLYYFARHPDKVFSRMDLLNAVWGYQHEGYEHTVNTHINRLRTKIEVDPAQPKRI
CCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEECCCCCCHHH
LTVWRRGYRFVADPQADAAQDEGEAS
HHHHHHCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]