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The map label for this gene is tnpA

Identifier: 94310116

GI number: 94310116

Start: 1282324

End: 1283424

Strand: Direct

Name: tnpA

Synonym: Rmet_1171

Alternate gene names: NA

Gene position: 1282324-1283424 (Clockwise)

Preceding gene: 94310113

Following gene: 94310118

Centisome position: 32.64

GC content: 59.95

Gene sequence:

>1101_bases
ATGCGCGGCGCTGACACCTTCACCGAAAGTTTGTTCACCATGCGGCGGCTGGAAGATTTCGTGCCGAAGTCCCACCCCCT
GCGCGCGATCCGCACCATGGCGAACCAGGCGCTGGCGAAGATGGATCGGCTGTTCGCGCAAATGTACGAGGCCGATATCA
AGGGTGGCCGGCCCAGCATCGCGCCGGAGAAGTTGCTGCGGGCCATGCTGCTGCAGGTGCTCTACAGCGTCCGGTCGGAG
CGCCAGCTCATGGAACAGACGCACTACAACTTGCTGTTTCGCTGGTTCATTGGCCTGGCGATGGATGATGTGGTCTGGGT
GCCCAGCGTCTTCAGCAAGAACCGGGAACGGCTGATCAAGCACGATGCTGTGATCGACTTCTTCAACGAAGTGCTGGCCA
TCGCGCAGAAGAAGGACTGGCTGTCGGGCGAGCACTTCAGCGTCGACGGCACGTTGATTAAGGCGTGGGCTGGCCACAAG
AGCTTTGTACGCAAGGATGGCGACGACCAAGACGATAACGACGGTGCTGACTTCAAGGGTGAAAAGCGCAGCAACGAGAC
GCACGAGTCCAAAACCGATCCCGATGCCAAGCTGTACCGCAAGGGCAAAACCGCCAGTGAACTGCGTTACATGGGTCATA
CCCTGAGCGACAACCGCCACGGCCTGGTGGTGAGCGCCATGGTGACCAATGCGGACGGACACGCCGAGCGCGAGGCCGCG
AAGGTCATGCTCAACGATGCCAGGCAGGTGATTGAGGACCTGAATGTGGAAGTCACCGTGGGTGCGGACAAGGGCTACGA
CGCGCACGAGTTCATTCAAGCCTGCCTGGAGTTGAAGGTGACGCCGCACGTCGCACAAAACACCTCTGGCCGCCGCTCGG
CCGTTCCCGACGCCATTGCAGGCACCAAGGGTTATGCCATCTCACAGCAGAAGCGCAAGCTGATTGAACAAGGCTTTGGA
TGGGCCAAGACCGTTGGGCGCATGCGCCAGGTGATGGTGCGCGGACTAAAGAAGGTCGATCAAATGTTTGTGCTGAGCAT
GGCCGCCTACAACCTCGTGCGCATGCGTTCGCTGGGACAAATCCGTCCGCAGTTGCAGTAA

Upstream 100 bases:

>100_bases
AGTCCCGTAGGCTTAGCAGGCTGCTGAAATACCGGCAGCGAACGTCAGCGCGACGACTTGCTGAATCGTTAATCTGAGGA
CTCCATACAATCCCACGTTC

Downstream 100 bases:

>100_bases
TCGCGGCAATGAGGCCGGAAACGGTCGCCAAATCAACGAAAAAGTCGGTGAAGTGACGATCAGCTTCCGGATTGTGAAAA
ATAGCGAGCCCATCAGCCTT

Product: transposase ISRme1

Products: NA

Alternate protein names: Transposase IS4 Family Protein; ISBma2 Transposase; IS4 Family Transposase; ISGsu3 Transposase; Transposase Is4 Family Protein; ISPsy22 Transposase Truncated; Transposase Or Inactivated Derivative; Transposase And Inactivated Derivative; Transposase Fragment; ISMca1 Transposase; IS5 Family Transposase N-Terminal Domain; IS5 Family Transposase N-Terminal Domain Protein; Transposase Fragment IS5 Family; Acyl-CoA N-Acyltransferase Domain; Transposase-Related Protein; Phage-Associated Cell Wall Hydrolase; ISGsu2 Transposase; Prevent-Host-Death Family Protein; Transposase For Insertion Sequence NGRIS-8b; ISSag8 Transposase

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MRGADTFTESLFTMRRLEDFVPKSHPLRAIRTMANQALAKMDRLFAQMYEADIKGGRPSIAPEKLLRAMLLQVLYSVRSE
RQLMEQTHYNLLFRWFIGLAMDDVVWVPSVFSKNRERLIKHDAVIDFFNEVLAIAQKKDWLSGEHFSVDGTLIKAWAGHK
SFVRKDGDDQDDNDGADFKGEKRSNETHESKTDPDAKLYRKGKTASELRYMGHTLSDNRHGLVVSAMVTNADGHAEREAA
KVMLNDARQVIEDLNVEVTVGADKGYDAHEFIQACLELKVTPHVAQNTSGRRSAVPDAIAGTKGYAISQQKRKLIEQGFG
WAKTVGRMRQVMVRGLKKVDQMFVLSMAAYNLVRMRSLGQIRPQLQ

Sequences:

>Translated_366_residues
MRGADTFTESLFTMRRLEDFVPKSHPLRAIRTMANQALAKMDRLFAQMYEADIKGGRPSIAPEKLLRAMLLQVLYSVRSE
RQLMEQTHYNLLFRWFIGLAMDDVVWVPSVFSKNRERLIKHDAVIDFFNEVLAIAQKKDWLSGEHFSVDGTLIKAWAGHK
SFVRKDGDDQDDNDGADFKGEKRSNETHESKTDPDAKLYRKGKTASELRYMGHTLSDNRHGLVVSAMVTNADGHAEREAA
KVMLNDARQVIEDLNVEVTVGADKGYDAHEFIQACLELKVTPHVAQNTSGRRSAVPDAIAGTKGYAISQQKRKLIEQGFG
WAKTVGRMRQVMVRGLKKVDQMFVLSMAAYNLVRMRSLGQIRPQLQ
>Mature_366_residues
MRGADTFTESLFTMRRLEDFVPKSHPLRAIRTMANQALAKMDRLFAQMYEADIKGGRPSIAPEKLLRAMLLQVLYSVRSE
RQLMEQTHYNLLFRWFIGLAMDDVVWVPSVFSKNRERLIKHDAVIDFFNEVLAIAQKKDWLSGEHFSVDGTLIKAWAGHK
SFVRKDGDDQDDNDGADFKGEKRSNETHESKTDPDAKLYRKGKTASELRYMGHTLSDNRHGLVVSAMVTNADGHAEREAA
KVMLNDARQVIEDLNVEVTVGADKGYDAHEFIQACLELKVTPHVAQNTSGRRSAVPDAIAGTKGYAISQQKRKLIEQGFG
WAKTVGRMRQVMVRGLKKVDQMFVLSMAAYNLVRMRSLGQIRPQLQ

Specific function: Unknown

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41472; Mature: 41472

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGADTFTESLFTMRRLEDFVPKSHPLRAIRTMANQALAKMDRLFAQMYEADIKGGRPSI
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
APEKLLRAMLLQVLYSVRSERQLMEQTHYNLLFRWFIGLAMDDVVWVPSVFSKNRERLIK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
HDAVIDFFNEVLAIAQKKDWLSGEHFSVDGTLIKAWAGHKSFVRKDGDDQDDNDGADFKG
HHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCC
EKRSNETHESKTDPDAKLYRKGKTASELRYMGHTLSDNRHGLVVSAMVTNADGHAEREAA
CCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHH
KVMLNDARQVIEDLNVEVTVGADKGYDAHEFIQACLELKVTPHVAQNTSGRRSAVPDAIA
HHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCHHHC
GTKGYAISQQKRKLIEQGFGWAKTVGRMRQVMVRGLKKVDQMFVLSMAAYNLVRMRSLGQ
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRPQLQ
CCCCCC
>Mature Secondary Structure
MRGADTFTESLFTMRRLEDFVPKSHPLRAIRTMANQALAKMDRLFAQMYEADIKGGRPSI
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
APEKLLRAMLLQVLYSVRSERQLMEQTHYNLLFRWFIGLAMDDVVWVPSVFSKNRERLIK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
HDAVIDFFNEVLAIAQKKDWLSGEHFSVDGTLIKAWAGHKSFVRKDGDDQDDNDGADFKG
HHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCC
EKRSNETHESKTDPDAKLYRKGKTASELRYMGHTLSDNRHGLVVSAMVTNADGHAEREAA
CCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHH
KVMLNDARQVIEDLNVEVTVGADKGYDAHEFIQACLELKVTPHVAQNTSGRRSAVPDAIA
HHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCHHHC
GTKGYAISQQKRKLIEQGFGWAKTVGRMRQVMVRGLKKVDQMFVLSMAAYNLVRMRSLGQ
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRPQLQ
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA