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The map label for this gene is ylaB [H]

Identifier: 94310035

GI number: 94310035

Start: 1183533

End: 1185125

Strand: Reverse

Name: ylaB [H]

Synonym: Rmet_1090

Alternate gene names: 94310035

Gene position: 1185125-1183533 (Counterclockwise)

Preceding gene: 94310036

Following gene: 94310029

Centisome position: 30.17

GC content: 57.88

Gene sequence:

>1593_bases
ATGATCAAGCGCATCACAGTTGTTTCGGCTTCGGTTGCCCTTGGGTGTCTCGCGACGGTCGTCCCAGTCCTCACCAGCCT
CTATGTCGCGAAAAAAGACGTCGAGCGACGAGAGCGTGCCGAGATTAAGGACTTCGCCAATAAGGCGATCATGCGCGCGG
AAGTTGTCACGTCCCAGGCCTTTGCCGCGCTCAATGATCTTGACCAACAGCCGGGTGCGCCTTGCTCGCCCCCCAACCTC
GAACATGCGGCACGCGTGATCTACAACTACCGGTACGTCCAGGATGCCGGTGCATACGCCGATGGGCTATACCTCTGCTC
GCCACTGCTCGGCGACGTGCGCGCGAAGGATCTAACGTTGCCTCCCCCGGATTATCAGAACAATGAGGGGTACTCCATGT
GGTTCAGGCGGAAGAGTCCGCTTAGCAACGAGCGCAATGACCTCCAGATCGGACGCAACGGCCGTTACGTCTCCATCGAT
CGCGGTTCTTACGTCGACCTGATCGACCCGGCCAAGCGTCCCATCGCGGCAATCCAAATCCCCACAGGAACGCTGATCGC
CGTCTCAACCGGCGCCGACCCAGGCGACATGCTCAACGCCTGGAAGCAAAGTGGCAACGTGAAGAGTGACGAATGGAATT
ACGCCGTAGCCCAGTCTTCAACACGACAGATCGCCGTCGTTGTGAAATCCCCGCGCAGCAGTATCGCCGGCAACTGGCCG
AAGTTGCTGGCTGCCTGGCTTTCCATTGGCGTCACTGCGGGTGCATTGCTTGGATGGCTTGCGTACAAACGCATCTCCTG
GCAGTTCTCATTCCCGGCAACCCTTGAATGGGCCATTTCACGGCGCAAGATCGACGTTGTCTATCAGCCGATCATCCGCA
TCGCCGACAACGAATGCGTAGGCGTCGAGGCGCTCACGAGGTGGACCCTTCACGGTCAATCGATCTCACCCGAGGTATTT
GTGCGAGTCGCCGAGGAAAATAACCTCATCCAGTCTTTGACAGACGTCGTCCTCGAGAAGACCATCGCGCAGCTTGGCAA
GATGCTCGTCGCGAATCCCACGTTCTATGTCTCGATCAATGTGAGCAGCGAGGATCTGCGCAGCGTACGCTTCCTTAACC
AACTCACGTCGTCGCTCGCTGGGACGGGCATCGCCCCCCGGCAGATCCGAATCGAAGCGACGGAGCGCAGTTTCATGAAT
ACGGAAGAGACACGAGGTGTCATTGCCGCGTTCAGGGCAGCCGGCCACCCCATCTACATTGACGACTTTGGAACAGGCTA
CTCGAGTCTGTCTTATCTGCAATCCTTCGAGATTGACGTTCTGAAAATCGACAAGTCGTTCGTCGACACGATCGAGCAGG
ACACTGCCTCAAGTGTTGTCGCTCCCCACATTATCGCGATGGCTCATGACATGGGCTTGGAAATCGTCGCTGAAGGTGTG
GAGTCGGCGGTTCAGATCGCATGGCTCCTCGAAAGAGGAGTGCATTATGCGCAGGGCTGGTATTACGCCAAGGCGATGAC
GGCGAGCACACTCGCACCATGGCTTAGCAGAGTTCATGCGCCACGCCAGGCAGTCAGCTTGGCGACAAGCTAG

Upstream 100 bases:

>100_bases
TTCTTACTCTGATCCTTCGCTTTCCTGGCACTTGAAGATGCGGCGCTCGCCCGCTTTTCAGCCGACCCTTGGCTCCCTGC
CGTCCATCCTGGGGTACGAA

Downstream 100 bases:

>100_bases
AAGATCCATGCGCATCGACGCTCTTAGCATGATTCGGCAAGACGGCAAGGCGCCCAGAGAGCATTGCACTGAAAACCTGA
CGGGCCGAAAGAGCCTGGAG

Product: putative signal transduction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MIKRITVVSASVALGCLATVVPVLTSLYVAKKDVERRERAEIKDFANKAIMRAEVVTSQAFAALNDLDQQPGAPCSPPNL
EHAARVIYNYRYVQDAGAYADGLYLCSPLLGDVRAKDLTLPPPDYQNNEGYSMWFRRKSPLSNERNDLQIGRNGRYVSID
RGSYVDLIDPAKRPIAAIQIPTGTLIAVSTGADPGDMLNAWKQSGNVKSDEWNYAVAQSSTRQIAVVVKSPRSSIAGNWP
KLLAAWLSIGVTAGALLGWLAYKRISWQFSFPATLEWAISRRKIDVVYQPIIRIADNECVGVEALTRWTLHGQSISPEVF
VRVAEENNLIQSLTDVVLEKTIAQLGKMLVANPTFYVSINVSSEDLRSVRFLNQLTSSLAGTGIAPRQIRIEATERSFMN
TEETRGVIAAFRAAGHPIYIDDFGTGYSSLSYLQSFEIDVLKIDKSFVDTIEQDTASSVVAPHIIAMAHDMGLEIVAEGV
ESAVQIAWLLERGVHYAQGWYYAKAMTASTLAPWLSRVHAPRQAVSLATS

Sequences:

>Translated_530_residues
MIKRITVVSASVALGCLATVVPVLTSLYVAKKDVERRERAEIKDFANKAIMRAEVVTSQAFAALNDLDQQPGAPCSPPNL
EHAARVIYNYRYVQDAGAYADGLYLCSPLLGDVRAKDLTLPPPDYQNNEGYSMWFRRKSPLSNERNDLQIGRNGRYVSID
RGSYVDLIDPAKRPIAAIQIPTGTLIAVSTGADPGDMLNAWKQSGNVKSDEWNYAVAQSSTRQIAVVVKSPRSSIAGNWP
KLLAAWLSIGVTAGALLGWLAYKRISWQFSFPATLEWAISRRKIDVVYQPIIRIADNECVGVEALTRWTLHGQSISPEVF
VRVAEENNLIQSLTDVVLEKTIAQLGKMLVANPTFYVSINVSSEDLRSVRFLNQLTSSLAGTGIAPRQIRIEATERSFMN
TEETRGVIAAFRAAGHPIYIDDFGTGYSSLSYLQSFEIDVLKIDKSFVDTIEQDTASSVVAPHIIAMAHDMGLEIVAEGV
ESAVQIAWLLERGVHYAQGWYYAKAMTASTLAPWLSRVHAPRQAVSLATS
>Mature_530_residues
MIKRITVVSASVALGCLATVVPVLTSLYVAKKDVERRERAEIKDFANKAIMRAEVVTSQAFAALNDLDQQPGAPCSPPNL
EHAARVIYNYRYVQDAGAYADGLYLCSPLLGDVRAKDLTLPPPDYQNNEGYSMWFRRKSPLSNERNDLQIGRNGRYVSID
RGSYVDLIDPAKRPIAAIQIPTGTLIAVSTGADPGDMLNAWKQSGNVKSDEWNYAVAQSSTRQIAVVVKSPRSSIAGNWP
KLLAAWLSIGVTAGALLGWLAYKRISWQFSFPATLEWAISRRKIDVVYQPIIRIADNECVGVEALTRWTLHGQSISPEVF
VRVAEENNLIQSLTDVVLEKTIAQLGKMLVANPTFYVSINVSSEDLRSVRFLNQLTSSLAGTGIAPRQIRIEATERSFMN
TEETRGVIAAFRAAGHPIYIDDFGTGYSSLSYLQSFEIDVLKIDKSFVDTIEQDTASSVVAPHIIAMAHDMGLEIVAEGV
ESAVQIAWLLERGVHYAQGWYYAKAMTASTLAPWLSRVHAPRQAVSLATS

Specific function: Unknown

COG id: COG4943

COG function: function code T; Predicted signal transduction protein containing sensor and EAL domains

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI87081743, Length=503, Percent_Identity=33.2007952286282, Blast_Score=273, Evalue=3e-74,
Organism=Escherichia coli, GI1790496, Length=514, Percent_Identity=30.9338521400778, Blast_Score=262, Evalue=3e-71,
Organism=Escherichia coli, GI87081980, Length=521, Percent_Identity=28.5988483685221, Blast_Score=151, Evalue=9e-38,
Organism=Escherichia coli, GI1788502, Length=290, Percent_Identity=32.0689655172414, Blast_Score=148, Evalue=1e-36,
Organism=Escherichia coli, GI87081845, Length=236, Percent_Identity=33.0508474576271, Blast_Score=128, Evalue=7e-31,
Organism=Escherichia coli, GI87081921, Length=269, Percent_Identity=32.3420074349442, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1787541, Length=246, Percent_Identity=33.3333333333333, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI1786507, Length=252, Percent_Identity=30.5555555555556, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI226510982, Length=240, Percent_Identity=30, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1787055, Length=229, Percent_Identity=31.0043668122271, Blast_Score=87, Evalue=4e-18,
Organism=Escherichia coli, GI1788849, Length=234, Percent_Identity=29.4871794871795, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI87082096, Length=199, Percent_Identity=29.6482412060301, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 58285; Mature: 58285

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRITVVSASVALGCLATVVPVLTSLYVAKKDVERRERAEIKDFANKAIMRAEVVTSQA
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAALNDLDQQPGAPCSPPNLEHAARVIYNYRYVQDAGAYADGLYLCSPLLGDVRAKDLTL
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEECCCCHHCHHHHHHHHHCCCCCCCCCC
PPPDYQNNEGYSMWFRRKSPLSNERNDLQIGRNGRYVSIDRGSYVDLIDPAKRPIAAIQI
CCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCEEEECCCCEEECCCCCCCCEEEEEE
PTGTLIAVSTGADPGDMLNAWKQSGNVKSDEWNYAVAQSSTRQIAVVVKSPRSSIAGNWP
CCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEECCCHHCCCCCH
KLLAAWLSIGVTAGALLGWLAYKRISWQFSFPATLEWAISRRKIDVVYQPIIRIADNECV
HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
GVEALTRWTLHGQSISPEVFVRVAEENNLIQSLTDVVLEKTIAQLGKMLVANPTFYVSIN
CHHHHHEEEECCCCCCHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEE
VSSEDLRSVRFLNQLTSSLAGTGIAPRQIRIEATERSFMNTEETRGVIAAFRAAGHPIYI
CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHCCCCEEE
DDFGTGYSSLSYLQSFEIDVLKIDKSFVDTIEQDTASSVVAPHIIAMAHDMGLEIVAEGV
ECCCCCHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ESAVQIAWLLERGVHYAQGWYYAKAMTASTLAPWLSRVHAPRQAVSLATS
HHHHHHHHHHHHCCHHHCCEEEEHHHHHHHHHHHHHHHCCCHHHHHCCCC
>Mature Secondary Structure
MIKRITVVSASVALGCLATVVPVLTSLYVAKKDVERRERAEIKDFANKAIMRAEVVTSQA
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAALNDLDQQPGAPCSPPNLEHAARVIYNYRYVQDAGAYADGLYLCSPLLGDVRAKDLTL
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEECCCCHHCHHHHHHHHHCCCCCCCCCC
PPPDYQNNEGYSMWFRRKSPLSNERNDLQIGRNGRYVSIDRGSYVDLIDPAKRPIAAIQI
CCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCEEEECCCCEEECCCCCCCCEEEEEE
PTGTLIAVSTGADPGDMLNAWKQSGNVKSDEWNYAVAQSSTRQIAVVVKSPRSSIAGNWP
CCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEECCCHHCCCCCH
KLLAAWLSIGVTAGALLGWLAYKRISWQFSFPATLEWAISRRKIDVVYQPIIRIADNECV
HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
GVEALTRWTLHGQSISPEVFVRVAEENNLIQSLTDVVLEKTIAQLGKMLVANPTFYVSIN
CHHHHHEEEECCCCCCHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEECCEEEEEEE
VSSEDLRSVRFLNQLTSSLAGTGIAPRQIRIEATERSFMNTEETRGVIAAFRAAGHPIYI
CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHCCCCEEE
DDFGTGYSSLSYLQSFEIDVLKIDKSFVDTIEQDTASSVVAPHIIAMAHDMGLEIVAEGV
ECCCCCHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ESAVQIAWLLERGVHYAQGWYYAKAMTASTLAPWLSRVHAPRQAVSLATS
HHHHHHHHHHHHCCHHHCCEEEEHHHHHHHHHHHHHHHCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]