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The map label for this gene is 94310029

Identifier: 94310029

GI number: 94310029

Start: 1175751

End: 1176506

Strand: Reverse

Name: 94310029

Synonym: Rmet_1084

Alternate gene names: NA

Gene position: 1176506-1175751 (Counterclockwise)

Preceding gene: 94310035

Following gene: 94310028

Centisome position: 29.95

GC content: 70.63

Gene sequence:

>756_bases
ATGCCGCGGAGTATAACGGACCGCCCTTACATGAGCCTGCCTCTGCCCATCCCGACCATTGTTTCGTCCCGCCGTGGCGG
CCCCCTTTCCGCGCTGGCGAGCGCGCTGGCGATGGCCGCCGCGCTGAGCGCAGCGCCAGCGTTCGCGCAGAACGGGCCGC
TTTCGCTGACGCCGCCACCGGCCGCGCCGACCGGACCGCAATCGGCGGACCCCGGCATGAAGCCCGCGCAGAAGGCGGCC
AACGAGAAGCGCTATGACGACGCCATCGCCGGATTCGACCGCGTGCTGGCCGACAACCCGCGCAATGCGCAGGCTCGATT
CCAGCGCGCATGGGCAATGGCCAAGGCCGGCCGCGAGGACGATGCGATCAAGGCCTTTGCCGAGATGGCGCAAGATTTCC
CCGAACTGCCAGAGCCGCACAATAACCTGGCGCTGCTGTACGCAAAACGCGGCGACCTGAAGCGCGCGGAGGCCGAACTG
CTGCTGGCCATCGAGGCCCGGCCCGACTACGCGCTCTCCTATAGCAACCTGGGCGACGTCTATCGGGCCCTGGCAGTCCA
GGCCTATGGCGACGCAACGCGCCGCAACCCCGGCGACAAGCGCGCCGCCGCGAGCCTACGCGAACTGCAGCCAGCCGCCG
CATCCGCGCCATCCGCCATGCCCGCCCCGGCATCGGGCGCCGCGGCGGTCAAGGGCAAGGCAAAGGCGGCCACGTCGCCG
GTTACCCCGCCCGCCAGCACGCCCGACGCACGCTGA

Upstream 100 bases:

>100_bases
CCCCATATCTTACCGGAAGCCATCAACGGCGGCCGGACGCGCTGCCGACAATGTCACGCGAACTTGCGACCTGTGCTCCA
CGCCCCGCCGCTTTGTTAGA

Downstream 100 bases:

>100_bases
ACTCGCACAGTATTCAACGCCTTATCCGGCGACGTCCAAGTGACGTTGCCGACTGCCAGACCTGCAACCCGGAGTCCAGA
CATGATCCTTTCCCGCCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Family Protein; Signal Peptide Protein; Tpr Repeat-Containing Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Protein; TPR Domain-Containing Protein; Exported Protein

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MPRSITDRPYMSLPLPIPTIVSSRRGGPLSALASALAMAAALSAAPAFAQNGPLSLTPPPAAPTGPQSADPGMKPAQKAA
NEKRYDDAIAGFDRVLADNPRNAQARFQRAWAMAKAGREDDAIKAFAEMAQDFPELPEPHNNLALLYAKRGDLKRAEAEL
LLAIEARPDYALSYSNLGDVYRALAVQAYGDATRRNPGDKRAAASLRELQPAAASAPSAMPAPASGAAAVKGKAKAATSP
VTPPASTPDAR

Sequences:

>Translated_251_residues
MPRSITDRPYMSLPLPIPTIVSSRRGGPLSALASALAMAAALSAAPAFAQNGPLSLTPPPAAPTGPQSADPGMKPAQKAA
NEKRYDDAIAGFDRVLADNPRNAQARFQRAWAMAKAGREDDAIKAFAEMAQDFPELPEPHNNLALLYAKRGDLKRAEAEL
LLAIEARPDYALSYSNLGDVYRALAVQAYGDATRRNPGDKRAAASLRELQPAAASAPSAMPAPASGAAAVKGKAKAATSP
VTPPASTPDAR
>Mature_250_residues
PRSITDRPYMSLPLPIPTIVSSRRGGPLSALASALAMAAALSAAPAFAQNGPLSLTPPPAAPTGPQSADPGMKPAQKAAN
EKRYDDAIAGFDRVLADNPRNAQARFQRAWAMAKAGREDDAIKAFAEMAQDFPELPEPHNNLALLYAKRGDLKRAEAELL
LAIEARPDYALSYSNLGDVYRALAVQAYGDATRRNPGDKRAAASLRELQPAAASAPSAMPAPASGAAAVKGKAKAATSPV
TPPASTPDAR

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26146; Mature: 26015

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRSITDRPYMSLPLPIPTIVSSRRGGPLSALASALAMAAALSAAPAFAQNGPLSLTPPP
CCCCCCCCCCEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCC
AAPTGPQSADPGMKPAQKAANEKRYDDAIAGFDRVLADNPRNAQARFQRAWAMAKAGRED
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCH
DAIKAFAEMAQDFPELPEPHNNLALLYAKRGDLKRAEAELLLAIEARPDYALSYSNLGDV
HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHCEEEEEEEECCCCCEECHHHHHHH
YRALAVQAYGDATRRNPGDKRAAASLRELQPAAASAPSAMPAPASGAAAVKGKAKAATSP
HHHHHHHHHCCHHCCCCCHHHHHHHHHHHCHHHHCCCCCCCCCCCCCHHHCCCHHHCCCC
VTPPASTPDAR
CCCCCCCCCCC
>Mature Secondary Structure 
PRSITDRPYMSLPLPIPTIVSSRRGGPLSALASALAMAAALSAAPAFAQNGPLSLTPPP
CCCCCCCCCEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCC
AAPTGPQSADPGMKPAQKAANEKRYDDAIAGFDRVLADNPRNAQARFQRAWAMAKAGRED
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCH
DAIKAFAEMAQDFPELPEPHNNLALLYAKRGDLKRAEAELLLAIEARPDYALSYSNLGDV
HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHCEEEEEEEECCCCCEECHHHHHHH
YRALAVQAYGDATRRNPGDKRAAASLRELQPAAASAPSAMPAPASGAAAVKGKAKAATSP
HHHHHHHHHCCHHCCCCCHHHHHHHHHHHCHHHHCCCCCCCCCCCCCHHHCCCHHHCCCC
VTPPASTPDAR
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA