Click here to switch to the map view.

The map label for this gene is xdhC [C]

Identifier: 94309836

GI number: 94309836

Start: 976126

End: 977121

Strand: Reverse

Name: xdhC [C]

Synonym: Rmet_0891

Alternate gene names: 94309836

Gene position: 977121-976126 (Counterclockwise)

Preceding gene: 94309837

Following gene: 94309835

Centisome position: 24.88

GC content: 67.27

Gene sequence:

>996_bases
ATGCAGGACGCCCCCCTCAAACCGTTCCGCTTCGCCGACGCCACCCGCTGGGTGCGCGCCGGCGTGCCCGTGGCGATGGT
CACCATCGTCGAAGTCAAGGGTTCCGCGCCGCGCGAGGCGGGCATCCGCATGCTGGTGACGGCCGACGACCTTGTTGGCA
CGATCGGCGGCGGCCACCTGGAGTGGCGCGGCATGGACATCGCCCGAGAGATGATCGCAAAGGGCGAAAACGGGGAGCAG
CGCCGCATCGAGCGTATTCCGCTTGGGCCCGCATTGGGTCAATGCTGCGGCGGCGTCGTGCGCCTGGCGTTTGAAGTACT
GACCCATGACGATCTGGCCTGGCTCGACGCGGTGGAATCGGCCTTCGCGACCGGCAAGGCACTCGCGCGGCATGTACCGG
TGACCGGAGCGGTTCGCACGGAAGCCAGCCGCGACCTGTTGCCGTCGGTGCAGCTTGCCGACGACAGCTGGATCGACACG
CTGGTGCCGAACGACATGCACATCGTGCTGTTTGGCGCAGGGCATGTCGGCCACGCGCTGGTCAAAGTGCTGGCCACGCT
GCCCTGCCGCGTGCACTGGGTCGACGAACGCGACACACTCTTCCCAGCCGGCCTGCCCGAGAACGTCGAGGCCGAAGCGA
CCGATACGGCAGAAGCCGTGGTCGACCAGGCCCCGGCAGGCAGCTATTTCCTGGTCATGACGCACAGCCATGCGCTCGAC
CAGACCCTCTGCGAGCGGATCTTCCGCCGCACCGATTTCGCTTACTTCGGCCTGATCGGCTCGAAGACCAAGCGCGCGAA
GTTCGAACACCGGATGGCCGAGCACGGCATCGACGCCGCGCGCTTTCCGGAAATGACATGTCCCATGGGGGTCTCCGGCA
TCACGGACAAGGCACCGGCTATGATTGCGGTAGCCATCGTCGCCCAACTGCTCCAGGTCCGCGACCAGCGCGCAGCCGCG
CTGGCCGCCAGCCGGCGGGAGGCGGTGCATCCGTAA

Upstream 100 bases:

>100_bases
CCGCCGCTGCGCGCGCCCGCCACCAGCGAAGCGATCCTCGACGCCGTGGAGGCCGTGCAGGCCGCCGTGGTTTCCGCCTG
ACGCAATACCAGGACCGATC

Downstream 100 bases:

>100_bases
CTGGGCAGCCGTGATCCGGCTGCCGCCATAAGACAAGAGGCCCCATGACCATCGATGCCGCGCTGGCGGACAAGATCCGC
CGTACCCCCAAGGCCGAACT

Product: xanthine dehydrogenase, maturation factor

Products: NA

Alternate protein names: Molybdenum Cofactor Sulfurylase; Xanthine And Co Dehydrogenase Maturation Factor; Xanthine Dehydrogenase Accessory Factor XdhC; Xanthine Dehydrogenase Protein; Xanthine Dehydrogenase Accessory Protein; Xanthine Dehydrogenase Accessory Factor; Adenosine Deaminase; Xanthine Dehydrogenase Cofactor Insertion; Xanthine Dehydrogenase Accessory Protein Xdhc; XdhC Protein; Xanthine Dehydrogenase; Xanthine And CO Dehydrogenases Maturation Factor; Dehydrogenase; Xanthine Dehydrogenase Accessory Factor X; Xanthine Dehydrogenase Xdh C Protein; XANTHINE DEHYDROGENASE Accessory Component; Xanthine Dehydrogenase XdhC; Xanthine Dehydrogenase Chaperone; Chaperone XdhC; Xanthine Dehydrogenase Maturation Factor; Xanthine/CO Dehydrogenase Maturation Protein; Xanthine Dehydrogenase Protein C Subunit

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MQDAPLKPFRFADATRWVRAGVPVAMVTIVEVKGSAPREAGIRMLVTADDLVGTIGGGHLEWRGMDIAREMIAKGENGEQ
RRIERIPLGPALGQCCGGVVRLAFEVLTHDDLAWLDAVESAFATGKALARHVPVTGAVRTEASRDLLPSVQLADDSWIDT
LVPNDMHIVLFGAGHVGHALVKVLATLPCRVHWVDERDTLFPAGLPENVEAEATDTAEAVVDQAPAGSYFLVMTHSHALD
QTLCERIFRRTDFAYFGLIGSKTKRAKFEHRMAEHGIDAARFPEMTCPMGVSGITDKAPAMIAVAIVAQLLQVRDQRAAA
LAASRREAVHP

Sequences:

>Translated_331_residues
MQDAPLKPFRFADATRWVRAGVPVAMVTIVEVKGSAPREAGIRMLVTADDLVGTIGGGHLEWRGMDIAREMIAKGENGEQ
RRIERIPLGPALGQCCGGVVRLAFEVLTHDDLAWLDAVESAFATGKALARHVPVTGAVRTEASRDLLPSVQLADDSWIDT
LVPNDMHIVLFGAGHVGHALVKVLATLPCRVHWVDERDTLFPAGLPENVEAEATDTAEAVVDQAPAGSYFLVMTHSHALD
QTLCERIFRRTDFAYFGLIGSKTKRAKFEHRMAEHGIDAARFPEMTCPMGVSGITDKAPAMIAVAIVAQLLQVRDQRAAA
LAASRREAVHP
>Mature_331_residues
MQDAPLKPFRFADATRWVRAGVPVAMVTIVEVKGSAPREAGIRMLVTADDLVGTIGGGHLEWRGMDIAREMIAKGENGEQ
RRIERIPLGPALGQCCGGVVRLAFEVLTHDDLAWLDAVESAFATGKALARHVPVTGAVRTEASRDLLPSVQLADDSWIDT
LVPNDMHIVLFGAGHVGHALVKVLATLPCRVHWVDERDTLFPAGLPENVEAEATDTAEAVVDQAPAGSYFLVMTHSHALD
QTLCERIFRRTDFAYFGLIGSKTKRAKFEHRMAEHGIDAARFPEMTCPMGVSGITDKAPAMIAVAIVAQLLQVRDQRAAA
LAASRREAVHP

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35847; Mature: 35847

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDAPLKPFRFADATRWVRAGVPVAMVTIVEVKGSAPREAGIRMLVTADDLVGTIGGGHL
CCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCHHHCCEEEEEEHHHHHHCCCCEE
EWRGMDIAREMIAKGENGEQRRIERIPLGPALGQCCGGVVRLAFEVLTHDDLAWLDAVES
EECCHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AFATGKALARHVPVTGAVRTEASRDLLPSVQLADDSWIDTLVPNDMHIVLFGAGHVGHAL
HHHHHHHHHHHCCCCCCHHCCHHHHCCCCEEECCCCHHHHHCCCCEEEEEEECCHHHHHH
VKVLATLPCRVHWVDERDTLFPAGLPENVEAEATDTAEAVVDQAPAGSYFLVMTHSHALD
HHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCHHHH
QTLCERIFRRTDFAYFGLIGSKTKRAKFEHRMAEHGIDAARFPEMTCPMGVSGITDKAPA
HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHH
MIAVAIVAQLLQVRDQRAAALAASRREAVHP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQDAPLKPFRFADATRWVRAGVPVAMVTIVEVKGSAPREAGIRMLVTADDLVGTIGGGHL
CCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCHHHCCEEEEEEHHHHHHCCCCEE
EWRGMDIAREMIAKGENGEQRRIERIPLGPALGQCCGGVVRLAFEVLTHDDLAWLDAVES
EECCHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AFATGKALARHVPVTGAVRTEASRDLLPSVQLADDSWIDTLVPNDMHIVLFGAGHVGHAL
HHHHHHHHHHHCCCCCCHHCCHHHHCCCCEEECCCCHHHHHCCCCEEEEEEECCHHHHHH
VKVLATLPCRVHWVDERDTLFPAGLPENVEAEATDTAEAVVDQAPAGSYFLVMTHSHALD
HHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCHHHH
QTLCERIFRRTDFAYFGLIGSKTKRAKFEHRMAEHGIDAARFPEMTCPMGVSGITDKAPA
HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHH
MIAVAIVAQLLQVRDQRAAALAASRREAVHP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA