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The map label for this gene is piuC [C]

Identifier: 94309783

GI number: 94309783

Start: 917498

End: 918184

Strand: Direct

Name: piuC [C]

Synonym: Rmet_0838

Alternate gene names: 94309783

Gene position: 917498-918184 (Clockwise)

Preceding gene: 94309782

Following gene: 94309784

Centisome position: 23.36

GC content: 61.86

Gene sequence:

>687_bases
ATGCTCATTCAGATACCCAATGTCCTCACGCCGGAGGAAGTCCGGTACTGCAGGCAACGGCTGGAAAGTTCGAACTGGGT
CGACGGTCGCGTTACTGCGGGCGATCTCGCGGCCCAGTCCAAGCTCAATCTGCAGATTCCCGTCGATAGCGAGGTAGCAC
AGGAACTCGGCGAGTTCATCCTGACCGCGCTGGGTCGCAATGCCTCGTATCACTCCGCCGCGCTGCCTCTGCGCGTCTTG
CCGCCGATGTTCAATCGCTATGAAGGCGGCATGACATTCGGCACGCACGTGGACAATGCCATCCGTACCGTGCCGGGCAC
CGGCGGGATGCGTATCCGCGCCGATGTCTCTAGCACGCTCTTCCTGACCGATCCCGACGAGTACGACGGCGGAGAACTCG
TGATCAAGGACCTGTACGGTAGCCATACGGTGAAGCTGCCGGCCGGGCACATGGTGGTCTATCCTGCGTCGTCGCTGCAC
GCCGTGACTCCGGTCACGCGCGGCGCTCGCTGGGCTTCGTTCTTCTGGGCGCAATCGATGGTCAAGGACGACGGCCAGCG
GACGATGCTCTACGAACTCGATCTGACGATCATGGAAGTCCGCAGGCAACTCGGCGACGACAAAGACGCCGTGCTCGCGC
TGGTCAACCACTATCACAACCTGCTCAGGCGCTGGGCAGAGCTTTGA

Upstream 100 bases:

>100_bases
AACGTCGGCATGACGTTCTAACGCAAGTCGCGGGCTTCACGGAGCGGCTACCATACGCTTTCCGGCGCACCTGTGCCGCT
CCGCCAAACCTTGAAGTGCC

Downstream 100 bases:

>100_bases
CTCCCATGCAGATCCCCACCGACACTGTTTCGCTGCGTGACTACGAATATCGCTTTCACGAAAGGGTGGACCCGGCGATT
CGCGCCTACATCGCGGGCGC

Product: Fe(II)-dependent oxygenase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MLIQIPNVLTPEEVRYCRQRLESSNWVDGRVTAGDLAAQSKLNLQIPVDSEVAQELGEFILTALGRNASYHSAALPLRVL
PPMFNRYEGGMTFGTHVDNAIRTVPGTGGMRIRADVSSTLFLTDPDEYDGGELVIKDLYGSHTVKLPAGHMVVYPASSLH
AVTPVTRGARWASFFWAQSMVKDDGQRTMLYELDLTIMEVRRQLGDDKDAVLALVNHYHNLLRRWAEL

Sequences:

>Translated_228_residues
MLIQIPNVLTPEEVRYCRQRLESSNWVDGRVTAGDLAAQSKLNLQIPVDSEVAQELGEFILTALGRNASYHSAALPLRVL
PPMFNRYEGGMTFGTHVDNAIRTVPGTGGMRIRADVSSTLFLTDPDEYDGGELVIKDLYGSHTVKLPAGHMVVYPASSLH
AVTPVTRGARWASFFWAQSMVKDDGQRTMLYELDLTIMEVRRQLGDDKDAVLALVNHYHNLLRRWAEL
>Mature_228_residues
MLIQIPNVLTPEEVRYCRQRLESSNWVDGRVTAGDLAAQSKLNLQIPVDSEVAQELGEFILTALGRNASYHSAALPLRVL
PPMFNRYEGGMTFGTHVDNAIRTVPGTGGMRIRADVSSTLFLTDPDEYDGGELVIKDLYGSHTVKLPAGHMVVYPASSLH
AVTPVTRGARWASFFWAQSMVKDDGQRTMLYELDLTIMEVRRQLGDDKDAVLALVNHYHNLLRRWAEL

Specific function: Unknown

COG id: COG3128

COG function: function code S; Uncharacterized iron-regulated protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe2OG dioxygenase domain

Homologues:

Organism=Escherichia coli, GI87081784, Length=228, Percent_Identity=50.4385964912281, Blast_Score=239, Evalue=9e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y838_RALME (Q1LQ52)

Other databases:

- EMBL:   CP000352
- RefSeq:   YP_582993.1
- ProteinModelPortal:   Q1LQ52
- STRING:   Q1LQ52
- GeneID:   4037629
- GenomeReviews:   CP000352_GR
- KEGG:   rme:Rmet_0838
- eggNOG:   COG3128
- HOGENOM:   HBG285605
- OMA:   ADWADGK
- PhylomeDB:   Q1LQ52
- ProtClustDB:   PRK05467
- BioCyc:   RMET266264:RMET_0838-MONOMER
- HAMAP:   MF_00657
- InterPro:   IPR005123
- InterPro:   IPR006620
- SMART:   SM00702

Pfam domain/function: PF03171 2OG-FeII_Oxy

EC number: 1.14.11.- [C]

Molecular weight: Translated: 25453; Mature: 25453

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS51471 FE2OG_OXY

Important sites: BINDING 170-170

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIQIPNVLTPEEVRYCRQRLESSNWVDGRVTAGDLAAQSKLNLQIPVDSEVAQELGEFI
CEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEHHHHHHCCCCEEECCCCHHHHHHHHHHH
LTALGRNASYHSAALPLRVLPPMFNRYEGGMTFGTHVDNAIRTVPGTGGMRIRADVSSTL
HHHHCCCCCCCHHCCCHHHCCHHHHHHCCCCEECCHHCCHHHCCCCCCCEEEEEECCCEE
FLTDPDEYDGGELVIKDLYGSHTVKLPAGHMVVYPASSLHAVTPVTRGARWASFFWAQSM
EEECCCCCCCCEEEEEECCCCEEEEECCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHH
VKDDGQRTMLYELDLTIMEVRRQLGDDKDAVLALVNHYHNLLRRWAEL
HHCCCCEEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLIQIPNVLTPEEVRYCRQRLESSNWVDGRVTAGDLAAQSKLNLQIPVDSEVAQELGEFI
CEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEHHHHHHCCCCEEECCCCHHHHHHHHHHH
LTALGRNASYHSAALPLRVLPPMFNRYEGGMTFGTHVDNAIRTVPGTGGMRIRADVSSTL
HHHHCCCCCCCHHCCCHHHCCHHHHHHCCCCEECCHHCCHHHCCCCCCCEEEEEECCCEE
FLTDPDEYDGGELVIKDLYGSHTVKLPAGHMVVYPASSLHAVTPVTRGARWASFFWAQSM
EEECCCCCCCCEEEEEECCCCEEEEECCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHH
VKDDGQRTMLYELDLTIMEVRRQLGDDKDAVLALVNHYHNLLRRWAEL
HHCCCCEEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA