| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is gltS2 [H]
Identifier: 94309534
GI number: 94309534
Start: 632195
End: 633967
Strand: Reverse
Name: gltS2 [H]
Synonym: Rmet_0589
Alternate gene names: 94309534
Gene position: 633967-632195 (Counterclockwise)
Preceding gene: 94309535
Following gene: 94309533
Centisome position: 16.14
GC content: 68.92
Gene sequence:
>1773_bases ATGCCCTCGCCATGGCGTCGCGTCGCGCCGTTCGTCGCCCTGCTCGCGCTGGCCGCCCTGGTCACGCTGGCCGGGTGGCT CGGCTATCGCTATACGTACGACACCGCGCTGGCCCGCCAGGCCGAGCGCGGCCAGGTGCAACTGCGCCTCTACGCCCAGG CGCTGGAAAGCGAGCTGGCGCGCTACGACTACGTGCCGAGCCTGCTGTCGCTGGACGCGCGGATCGAAGGGCTGCTGCGC GAGCCGGGCGATCCCGCGCACGTGGCGCAAGCCAATGCCTATCTGGCATCGCTGAACATCCGCGCCGGCACGCGCGTGGT CTATGTGCTCGACGCCCGCGGCAAGGTGCTGGCAACGAGCAACTACCAGCGCCCCGACAGCTACCTGGGCGAAGACCTGA GCTTCCGCCCCTATTTCCGCACGGCCATCGACGGCCAGCTCGGGCGCTTCTACGGCGTGGGCACCACGCGCAGCGAATCC GGCTACTACCTGTCCGCGCCGCTCGGCGACCGTGACCGGCCTCAGGGCGTGGCCGTGGTCAAGATCGGCCTCGAACCGCT GGAGAACCGCTGGCAGGGCAACGACAGCCAGATGCTGCTGGCCGACGAGAATGGCGTCGTGATCCTGGCCTCCGATCCAT CATGGAAGCTGGCCGCCTTGCGGCCGCTCTCCGCCGACCAACGCGCGAAGCTGGACCGCAGCCTGCAGTACAACCGCGCG CCGTTGGCGCAACTGGAACTGTCCAAGGTCCGCGCGCTCGGCACCGGCCCGGCCGAGGGCGGCGACGCCCTGATGCGTCT GCGCCAGGGCCCGCCAATGCTGGCCCAGCATCTGGCGCTGGCCGGCACGGACTGGAATCTCACTCTGCTCACCAACACCT CGCAGGCACGCGTGGCAGCGCTCAACAGCGCCGCGCTGGAAGCAGCCAACAGCGAACTCGAGCGCAAGGTGGCCGAGCGC ACCGCCGACCTGTCCGCCACCAACCAGCAGCTTCATGCCGAAGTGGCCGAACGGATCCGCACCGAGACAGTGTTGCGCCA GGCCCAGGACGGCCTGATGCAGGCCGGCAAGCTCGCCGCCGTAGGCCAGATGTCGGCCGGCATCGCACACGAACTGAACC AGCCCCTGACCGCGCTGCGCACGCTGTCCGGCAACACGGGCAAGTTCCTGGAACGCGGCGACTACGCGACGGTGCAGCAC AACCTGGACAAGATCGTCGGACTGGTGGAGCGGATGGGTCGCATCACGGGCGCGCTCAAGTCGTTTGCCCGCAATCCATC GGCCAGCCAGCGCAGTGTGGCGTATCTGGGCGACGCCGTTGAAAATGCGCTGTTCCTGCTGGAAACGCGTGTGGCGGCCG TGGCGCCGCGCATCGAGCGCCAGATCGACGCGCGCCTGGCCGTGGCCTGCGATCCGAACCGCCTCGAACAGGTGCTGGTC AACCTGATCGGCAATGCGCTCGACGCGCTGCGCGACCGCCCCGATCCCCTGCTGTCGTTGCACGCCTACGAAACCGGCGA AAACGGCGGCATGGTGCATCTGACGGTGCGGGACAACGGCCCCGGCCTCTCCGAAGCCGCGTTCGCGAAGCTGTTCGAAC CGTTCTTCACCACCAAACCCGCGGGCGAAGGGCTCGGCCTTGGGCTCACCCTGTCGGCCGGCATCCTCAACGAGAACGGC GGCACCCTGACCGCGATCAATCACCCCGATGGCGGCGCCTGCTTCACGCTGGCGCTGCCGCAGGCGCGCGAGACACTTCG CCATGTCGGCTAA
Upstream 100 bases:
>100_bases AAATGCCTTATACAGCACTCATTGGCGCCCGTATCACCGATTCCGCATGATTGCCCCCCTTGAATCCATCCCCGTTCCCG GCCAGTCCGAGGGCGGCGGT
Downstream 100 bases:
>100_bases CCCGATCGAAGCGCCCCTGGACGCCGAGGCAACAAGCCCCGTGCTGACCGTGCTCATCGTCGAGGACGACGCCGACGTGC GGCTCGGCTGCGAACAGGCG
Product: signal transduction histidine kinase regulating C4-dicarboxylate transport system
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 590; Mature: 589
Protein sequence:
>590_residues MPSPWRRVAPFVALLALAALVTLAGWLGYRYTYDTALARQAERGQVQLRLYAQALESELARYDYVPSLLSLDARIEGLLR EPGDPAHVAQANAYLASLNIRAGTRVVYVLDARGKVLATSNYQRPDSYLGEDLSFRPYFRTAIDGQLGRFYGVGTTRSES GYYLSAPLGDRDRPQGVAVVKIGLEPLENRWQGNDSQMLLADENGVVILASDPSWKLAALRPLSADQRAKLDRSLQYNRA PLAQLELSKVRALGTGPAEGGDALMRLRQGPPMLAQHLALAGTDWNLTLLTNTSQARVAALNSAALEAANSELERKVAER TADLSATNQQLHAEVAERIRTETVLRQAQDGLMQAGKLAAVGQMSAGIAHELNQPLTALRTLSGNTGKFLERGDYATVQH NLDKIVGLVERMGRITGALKSFARNPSASQRSVAYLGDAVENALFLLETRVAAVAPRIERQIDARLAVACDPNRLEQVLV NLIGNALDALRDRPDPLLSLHAYETGENGGMVHLTVRDNGPGLSEAAFAKLFEPFFTTKPAGEGLGLGLTLSAGILNENG GTLTAINHPDGGACFTLALPQARETLRHVG
Sequences:
>Translated_590_residues MPSPWRRVAPFVALLALAALVTLAGWLGYRYTYDTALARQAERGQVQLRLYAQALESELARYDYVPSLLSLDARIEGLLR EPGDPAHVAQANAYLASLNIRAGTRVVYVLDARGKVLATSNYQRPDSYLGEDLSFRPYFRTAIDGQLGRFYGVGTTRSES GYYLSAPLGDRDRPQGVAVVKIGLEPLENRWQGNDSQMLLADENGVVILASDPSWKLAALRPLSADQRAKLDRSLQYNRA PLAQLELSKVRALGTGPAEGGDALMRLRQGPPMLAQHLALAGTDWNLTLLTNTSQARVAALNSAALEAANSELERKVAER TADLSATNQQLHAEVAERIRTETVLRQAQDGLMQAGKLAAVGQMSAGIAHELNQPLTALRTLSGNTGKFLERGDYATVQH NLDKIVGLVERMGRITGALKSFARNPSASQRSVAYLGDAVENALFLLETRVAAVAPRIERQIDARLAVACDPNRLEQVLV NLIGNALDALRDRPDPLLSLHAYETGENGGMVHLTVRDNGPGLSEAAFAKLFEPFFTTKPAGEGLGLGLTLSAGILNENG GTLTAINHPDGGACFTLALPQARETLRHVG >Mature_589_residues PSPWRRVAPFVALLALAALVTLAGWLGYRYTYDTALARQAERGQVQLRLYAQALESELARYDYVPSLLSLDARIEGLLRE PGDPAHVAQANAYLASLNIRAGTRVVYVLDARGKVLATSNYQRPDSYLGEDLSFRPYFRTAIDGQLGRFYGVGTTRSESG YYLSAPLGDRDRPQGVAVVKIGLEPLENRWQGNDSQMLLADENGVVILASDPSWKLAALRPLSADQRAKLDRSLQYNRAP LAQLELSKVRALGTGPAEGGDALMRLRQGPPMLAQHLALAGTDWNLTLLTNTSQARVAALNSAALEAANSELERKVAERT ADLSATNQQLHAEVAERIRTETVLRQAQDGLMQAGKLAAVGQMSAGIAHELNQPLTALRTLSGNTGKFLERGDYATVQHN LDKIVGLVERMGRITGALKSFARNPSASQRSVAYLGDAVENALFLLETRVAAVAPRIERQIDARLAVACDPNRLEQVLVN LIGNALDALRDRPDPLLSLHAYETGENGGMVHLTVRDNGPGLSEAAFAKLFEPFFTTKPAGEGLGLGLTLSAGILNENGG TLTAINHPDGGACFTLALPQARETLRHVG
Specific function: Member of the two-component regulatory system dctB/dctD involved in the transport of C4-dicarboxylates. DctB functions as a membrane-associated protein kinase that phosphorylates dctD in response to environmental signals [H]
COG id: COG4191
COG function: function code T; Signal transduction histidine kinase regulating C4-dicarboxylate transport system
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788549, Length=271, Percent_Identity=31.3653136531365, Blast_Score=116, Evalue=3e-27, Organism=Escherichia coli, GI1790436, Length=240, Percent_Identity=30, Blast_Score=99, Evalue=7e-22, Organism=Escherichia coli, GI87081816, Length=221, Percent_Identity=28.5067873303167, Blast_Score=76, Evalue=6e-15, Organism=Escherichia coli, GI1786912, Length=116, Percent_Identity=37.9310344827586, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1788393, Length=258, Percent_Identity=29.4573643410853, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR017055 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 63690; Mature: 63559
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPWRRVAPFVALLALAALVTLAGWLGYRYTYDTALARQAERGQVQLRLYAQALESELA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHCCCEEHHHHHHHHHHHHH RYDYVPSLLSLDARIEGLLREPGDPAHVAQANAYLASLNIRAGTRVVYVLDARGKVLATS HHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHCEEEEEEEEECCCEEEEEEECCCCEEECC NYQRPDSYLGEDLSFRPYFRTAIDGQLGRFYGVGTTRSESGYYLSAPLGDRDRPQGVAVV CCCCCHHHHCCCCCCCCHHHHHHCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCEEEE KIGLEPLENRWQGNDSQMLLADENGVVILASDPSWKLAALRPLSADQRAKLDRSLQYNRA EECCHHHHHHCCCCCCEEEEECCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCCC PLAQLELSKVRALGTGPAEGGDALMRLRQGPPMLAQHLALAGTDWNLTLLTNTSQARVAA CHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHH LNSAALEAANSELERKVAERTADLSATNQQLHAEVAERIRTETVLRQAQDGLMQAGKLAA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VGQMSAGIAHELNQPLTALRTLSGNTGKFLERGDYATVQHNLDKIVGLVERMGRITGALK HHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SFARNPSASQRSVAYLGDAVENALFLLETRVAAVAPRIERQIDARLAVACDPNRLEQVLV HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHH NLIGNALDALRDRPDPLLSLHAYETGENGGMVHLTVRDNGPGLSEAAFAKLFEPFFTTKP HHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCC AGEGLGLGLTLSAGILNENGGTLTAINHPDGGACFTLALPQARETLRHVG CCCCCCEEEEEEECEEECCCCEEEEEECCCCCEEEEEECHHHHHHHHHCC >Mature Secondary Structure PSPWRRVAPFVALLALAALVTLAGWLGYRYTYDTALARQAERGQVQLRLYAQALESELA CCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHCCCEEHHHHHHHHHHHHH RYDYVPSLLSLDARIEGLLREPGDPAHVAQANAYLASLNIRAGTRVVYVLDARGKVLATS HHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHCEEEEEEEEECCCEEEEEEECCCCEEECC NYQRPDSYLGEDLSFRPYFRTAIDGQLGRFYGVGTTRSESGYYLSAPLGDRDRPQGVAVV CCCCCHHHHCCCCCCCCHHHHHHCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCEEEE KIGLEPLENRWQGNDSQMLLADENGVVILASDPSWKLAALRPLSADQRAKLDRSLQYNRA EECCHHHHHHCCCCCCEEEEECCCCEEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCCC PLAQLELSKVRALGTGPAEGGDALMRLRQGPPMLAQHLALAGTDWNLTLLTNTSQARVAA CHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHH LNSAALEAANSELERKVAERTADLSATNQQLHAEVAERIRTETVLRQAQDGLMQAGKLAA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VGQMSAGIAHELNQPLTALRTLSGNTGKFLERGDYATVQHNLDKIVGLVERMGRITGALK HHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SFARNPSASQRSVAYLGDAVENALFLLETRVAAVAPRIERQIDARLAVACDPNRLEQVLV HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHH NLIGNALDALRDRPDPLLSLHAYETGENGGMVHLTVRDNGPGLSEAAFAKLFEPFFTTKP HHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCC AGEGLGLGLTLSAGILNENGGTLTAINHPDGGACFTLALPQARETLRHVG CCCCCCEEEEEEECEEECCCCEEEEEECCCCCEEEEEECHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2134335; 2793824; 11481431; 2551890; 2695394 [H]