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The map label for this gene is gltR2 [H]

Identifier: 94309533

GI number: 94309533

Start: 630829

End: 632205

Strand: Reverse

Name: gltR2 [H]

Synonym: Rmet_0588

Alternate gene names: 94309533

Gene position: 632205-630829 (Counterclockwise)

Preceding gene: 94309534

Following gene: 94309532

Centisome position: 16.09

GC content: 66.38

Gene sequence:

>1377_bases
ATGTCGGCTAACCCGATCGAAGCGCCCCTGGACGCCGAGGCAACAAGCCCCGTGCTGACCGTGCTCATCGTCGAGGACGA
CGCCGACGTGCGGCTCGGCTGCGAACAGGCGCTGCGCCTCGAAGGCATTGCCACACGCGCGGTCGGCAGCGCCGAAGCTG
CGCTGCGTGAGGTCGATGCGGGCTACGCGGGCATCGTCGTCAGCGATATCAATCTGCCGGGATCGGACGGCATGGCGCTG
CTGCGCGAACTCGCGTCGCGCGATGCTGCACTGCCCGTCATCATGATCACCGGCCACGGCGATATCACGCTGGCCGTGCA
AGCCATGAAACAGGGCGCCTACGATTTCATCGAGAAGCCGTTCTCGCCAGAACGGCTCGTGGCCACCTGCCGGCGCGCGC
TGGAGAAGCGTCGCCTGGCGCTCGAGGTGGCAGACCTGCGAGCCCGGCTGGCGGGGCAGGAATCGCTCTCCGCGCGCCTG
ATCGGTCATTCGCCCGCCATCGAGCGCCTGCGCCAGATGATCACCGGCCTCGGCAACACGACCGCGAGCGTGCTGATTCA
TGGCGAGACCGGCACCGGCAAGGAACTTGTGGCACGCTGCCTGCACGAAGCCAGCGCGCGCCGGGCGCGGCATTTCGTGC
CGATCAATTGCGGCGGGCTGCCCGAGCAACTGTTCGAATCCGAGATCTTCGGCCATGAGGCCGGCGCGTTCACGGGTGCG
GCCAAACGCCGCATCGGCAAGATCGAACACGCTGAAGGCGGCACACTGTTTCTCGACGAAATCGAGAGCATGCCGATGCA
GATGCAGATCAAGCTGCTACGCGTGTTGCAGGAGCGCGTGGTGGAGCGGCTGGGCTCGAATCAGGCGGTGCAGGTCAACG
CGCGCGTGGTGGCGGCCACCAAGGCCGATCTGCGCGCGGCGGCCGATGTGGGCCAGTTCCGCGCCGATCTCTATTACCGT
CTCAATGTCGTCACGCTGGAGCTTCCGCCGTTGCGAGAGCGCCGGGAGGACATCCCGCTGCTGTTCGAGCACTTCGTCGC
GCAGGCCGCGCTGCGATTCGAACGCGAGGCGATTCCGCCCACGCCAGCCGAGATGGCCGGATTGATGGCCTACCCGTGGC
CCGGCAACGTGCGCGAGTTGCGCAACCTCGCCGAGCGCCATGTACTGGGGCTGGGATGCCGGCCAGGCGAAGGCGGACAC
GATATGGCGCCACCTGCGGCCTTGCCGCTGGCGCAGGCGGTAGAACAGTTCGAACGTGCACTGATAGCAGACGCACTGCG
CCGCCATGATGGCAATCTGACACGCGCCGGCGAGTCGCTCGGTATTGCCAAGACCACTCTTTTCGACAAGGTCCGCAAGT
ACGGACTTTCGTCATGA

Upstream 100 bases:

>100_bases
ATCCTCAACGAGAACGGCGGCACCCTGACCGCGATCAATCACCCCGATGGCGGCGCCTGCTTCACGCTGGCGCTGCCGCA
GGCGCGCGAGACACTTCGCC

Downstream 100 bases:

>100_bases
GAATGTGGCAATTTACAAAATGTCGTTTTGATGGGAACTGGCGACCACGCGGGGAGTCTCTGCAATCGTCATGTGAAGAA
CGTCTGATACATATCGCAAC

Product: response regulator of C4-dicarboxylate transport system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 457

Protein sequence:

>458_residues
MSANPIEAPLDAEATSPVLTVLIVEDDADVRLGCEQALRLEGIATRAVGSAEAALREVDAGYAGIVVSDINLPGSDGMAL
LRELASRDAALPVIMITGHGDITLAVQAMKQGAYDFIEKPFSPERLVATCRRALEKRRLALEVADLRARLAGQESLSARL
IGHSPAIERLRQMITGLGNTTASVLIHGETGTGKELVARCLHEASARRARHFVPINCGGLPEQLFESEIFGHEAGAFTGA
AKRRIGKIEHAEGGTLFLDEIESMPMQMQIKLLRVLQERVVERLGSNQAVQVNARVVAATKADLRAAADVGQFRADLYYR
LNVVTLELPPLRERREDIPLLFEHFVAQAALRFEREAIPPTPAEMAGLMAYPWPGNVRELRNLAERHVLGLGCRPGEGGH
DMAPPAALPLAQAVEQFERALIADALRRHDGNLTRAGESLGIAKTTLFDKVRKYGLSS

Sequences:

>Translated_458_residues
MSANPIEAPLDAEATSPVLTVLIVEDDADVRLGCEQALRLEGIATRAVGSAEAALREVDAGYAGIVVSDINLPGSDGMAL
LRELASRDAALPVIMITGHGDITLAVQAMKQGAYDFIEKPFSPERLVATCRRALEKRRLALEVADLRARLAGQESLSARL
IGHSPAIERLRQMITGLGNTTASVLIHGETGTGKELVARCLHEASARRARHFVPINCGGLPEQLFESEIFGHEAGAFTGA
AKRRIGKIEHAEGGTLFLDEIESMPMQMQIKLLRVLQERVVERLGSNQAVQVNARVVAATKADLRAAADVGQFRADLYYR
LNVVTLELPPLRERREDIPLLFEHFVAQAALRFEREAIPPTPAEMAGLMAYPWPGNVRELRNLAERHVLGLGCRPGEGGH
DMAPPAALPLAQAVEQFERALIADALRRHDGNLTRAGESLGIAKTTLFDKVRKYGLSS
>Mature_457_residues
SANPIEAPLDAEATSPVLTVLIVEDDADVRLGCEQALRLEGIATRAVGSAEAALREVDAGYAGIVVSDINLPGSDGMALL
RELASRDAALPVIMITGHGDITLAVQAMKQGAYDFIEKPFSPERLVATCRRALEKRRLALEVADLRARLAGQESLSARLI
GHSPAIERLRQMITGLGNTTASVLIHGETGTGKELVARCLHEASARRARHFVPINCGGLPEQLFESEIFGHEAGAFTGAA
KRRIGKIEHAEGGTLFLDEIESMPMQMQIKLLRVLQERVVERLGSNQAVQVNARVVAATKADLRAAADVGQFRADLYYRL
NVVTLELPPLRERREDIPLLFEHFVAQAALRFEREAIPPTPAEMAGLMAYPWPGNVRELRNLAERHVLGLGCRPGEGGHD
MAPPAALPLAQAVEQFERALIADALRRHDGNLTRAGESLGIAKTTLFDKVRKYGLSS

Specific function: Member of the two-component regulatory system dctB/dctD involved in the transport of C4-dicarboxylates. When activated by dctB acts in conjunction with sigma-54 to activate the transcription of dctA [H]

COG id: COG2204

COG function: function code T; Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

Organism=Escherichia coli, GI1788550, Length=453, Percent_Identity=39.0728476821192, Blast_Score=327, Evalue=1e-90,
Organism=Escherichia coli, GI1790437, Length=450, Percent_Identity=41.3333333333333, Blast_Score=317, Evalue=8e-88,
Organism=Escherichia coli, GI1790299, Length=468, Percent_Identity=37.8205128205128, Blast_Score=292, Evalue=3e-80,
Organism=Escherichia coli, GI1788905, Length=447, Percent_Identity=39.8210290827741, Blast_Score=290, Evalue=1e-79,
Organism=Escherichia coli, GI87082117, Length=320, Percent_Identity=44.6875, Blast_Score=248, Evalue=4e-67,
Organism=Escherichia coli, GI1789087, Length=334, Percent_Identity=43.1137724550898, Blast_Score=242, Evalue=3e-65,
Organism=Escherichia coli, GI1789233, Length=323, Percent_Identity=39.938080495356, Blast_Score=216, Evalue=2e-57,
Organism=Escherichia coli, GI1786524, Length=329, Percent_Identity=41.0334346504559, Blast_Score=213, Evalue=2e-56,
Organism=Escherichia coli, GI87082152, Length=319, Percent_Identity=40.7523510971787, Blast_Score=210, Evalue=2e-55,
Organism=Escherichia coli, GI87081872, Length=305, Percent_Identity=41.6393442622951, Blast_Score=209, Evalue=4e-55,
Organism=Escherichia coli, GI1787583, Length=319, Percent_Identity=36.9905956112853, Blast_Score=184, Evalue=8e-48,
Organism=Escherichia coli, GI87081858, Length=288, Percent_Identity=29.8611111111111, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1789828, Length=237, Percent_Identity=36.2869198312236, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1789809, Length=117, Percent_Identity=34.1880341880342, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1790552, Length=118, Percent_Identity=33.8983050847458, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1786599, Length=120, Percent_Identity=30, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR011006
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR002078
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02954 HTH_8; PF00072 Response_reg; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 49644; Mature: 49513

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00675 SIGMA54_INTERACT_1 ; PS00676 SIGMA54_INTERACT_2 ; PS00688 SIGMA54_INTERACT_3 ; PS50045 SIGMA54_INTERACT_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSANPIEAPLDAEATSPVLTVLIVEDDADVRLGCEQALRLEGIATRAVGSAEAALREVDA
CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCC
GYAGIVVSDINLPGSDGMALLRELASRDAALPVIMITGHGDITLAVQAMKQGAYDFIEKP
CCCEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCEEEHHHHHHCCCHHHHHCC
FSPERLVATCRRALEKRRLALEVADLRARLAGQESLSARLIGHSPAIERLRQMITGLGNT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCHHHHHHHHHHHCCCCC
TASVLIHGETGTGKELVARCLHEASARRARHFVPINCGGLPEQLFESEIFGHEAGAFTGA
EEEEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCCCCCHHHH
AKRRIGKIEHAEGGTLFLDEIESMPMQMQIKLLRVLQERVVERLGSNQAVQVNARVVAAT
HHHHHCCCCCCCCCEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEC
KADLRAAADVGQFRADLYYRLNVVTLELPPLRERREDIPLLFEHFVAQAALRFEREAIPP
HHHHHHHHHHHHHHHCEEEEEEEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
TPAEMAGLMAYPWPGNVRELRNLAERHVLGLGCRPGEGGHDMAPPAALPLAQAVEQFERA
CCHHHHCCEECCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LIADALRRHDGNLTRAGESLGIAKTTLFDKVRKYGLSS
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SANPIEAPLDAEATSPVLTVLIVEDDADVRLGCEQALRLEGIATRAVGSAEAALREVDA
CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCC
GYAGIVVSDINLPGSDGMALLRELASRDAALPVIMITGHGDITLAVQAMKQGAYDFIEKP
CCCEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCEEEHHHHHHCCCHHHHHCC
FSPERLVATCRRALEKRRLALEVADLRARLAGQESLSARLIGHSPAIERLRQMITGLGNT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCHHHHHHHHHHHCCCCC
TASVLIHGETGTGKELVARCLHEASARRARHFVPINCGGLPEQLFESEIFGHEAGAFTGA
EEEEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCCCCCHHHH
AKRRIGKIEHAEGGTLFLDEIESMPMQMQIKLLRVLQERVVERLGSNQAVQVNARVVAAT
HHHHHCCCCCCCCCEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEC
KADLRAAADVGQFRADLYYRLNVVTLELPPLRERREDIPLLFEHFVAQAALRFEREAIPP
HHHHHHHHHHHHHHHCEEEEEEEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
TPAEMAGLMAYPWPGNVRELRNLAERHVLGLGCRPGEGGHDMAPPAALPLAQAVEQFERA
CCHHHHCCEECCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LIADALRRHDGNLTRAGESLGIAKTTLFDKVRKYGLSS
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2134335; 2793824; 11481431 [H]