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The map label for this gene is 94309213

Identifier: 94309213

GI number: 94309213

Start: 284471

End: 285148

Strand: Direct

Name: 94309213

Synonym: Rmet_0268

Alternate gene names: NA

Gene position: 284471-285148 (Clockwise)

Preceding gene: 94309212

Following gene: 94309214

Centisome position: 7.24

GC content: 64.6

Gene sequence:

>678_bases
ATGGAAACCTATAAACGAACGATGAACGCACAGACGAACGCCATGCCGCAGCCAGATCCCACGGCTTCGCCGGACCCCCG
CATCGACGCGCGCACGCGCCGCGGCCGCCTGCAGATGCTGATGCTGCTGCTGGTCTGCGCATCGCCCGTACTCTTTTCGT
ACTTCACGTACTACGTGATCAAGCCGACCGGCGGCAGCACTAACTACGGCGTGCTGATCGACCCGCAACGGCCCATGCCG
CCCGTGCAGGTGACCAATGAGCGCAACGAGTCGGTGCCGCTCGCGTCCATGCGCGGCAAGTGGCTGATGGTGATGACCGA
CCCGTCCGCCTGCGACGAGACCTGCGCGAAGAAACTGTTCACGGTGCGCCAGATCCGCGTCGGACAGGGCGAGGACCGCG
AGCGGATCGTGCCTGTCTGGCTGATCCAGGACCGGGGCGATGTGGACGACCGGCTCGCCGCCGCCTACAACGAACCTTAT
GCGGGCGTGCGTTTCCTGCGCATGGACCGGGCCACGATTGCCCAATGGCTGCCGGCCGAGGACGGCGCGCGCGTCGAGGA
TGCGATTTACCTGGTCGATCCGCTCGGCAACCTGATGATGCGCTGGCCGAAGGACCCCGACCCCAAGAAGATCAGCAGCG
ACCTGAAGAAGCTGCTGAAGTATTCCCGTATTGGCTGA

Upstream 100 bases:

>100_bases
TACGGGTACGCTACCCAGTGGTTCGGGCTGGCCGTGTTGACGCTGGTGCTGGTGGCCGTCCTCGGCTGGCGGCGCGCCCG
GCTGGACCGGGCAGACGGCA

Downstream 100 bases:

>100_bases
ATCCCATGCTGCTTCAGTTGGCCATCATTGGCATCCTGATTGCGCTGCTGCCCCTGTCCTACGTGATGGTGCGCGGCGAT
CGCGACAAATATCGCAGACT

Product: putative transmembrane protein

Products: NA

Alternate protein names: Sco1/SenC Family Cytochrome Oxidase Assembly Protein

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
METYKRTMNAQTNAMPQPDPTASPDPRIDARTRRGRLQMLMLLLVCASPVLFSYFTYYVIKPTGGSTNYGVLIDPQRPMP
PVQVTNERNESVPLASMRGKWLMVMTDPSACDETCAKKLFTVRQIRVGQGEDRERIVPVWLIQDRGDVDDRLAAAYNEPY
AGVRFLRMDRATIAQWLPAEDGARVEDAIYLVDPLGNLMMRWPKDPDPKKISSDLKKLLKYSRIG

Sequences:

>Translated_225_residues
METYKRTMNAQTNAMPQPDPTASPDPRIDARTRRGRLQMLMLLLVCASPVLFSYFTYYVIKPTGGSTNYGVLIDPQRPMP
PVQVTNERNESVPLASMRGKWLMVMTDPSACDETCAKKLFTVRQIRVGQGEDRERIVPVWLIQDRGDVDDRLAAAYNEPY
AGVRFLRMDRATIAQWLPAEDGARVEDAIYLVDPLGNLMMRWPKDPDPKKISSDLKKLLKYSRIG
>Mature_225_residues
METYKRTMNAQTNAMPQPDPTASPDPRIDARTRRGRLQMLMLLLVCASPVLFSYFTYYVIKPTGGSTNYGVLIDPQRPMP
PVQVTNERNESVPLASMRGKWLMVMTDPSACDETCAKKLFTVRQIRVGQGEDRERIVPVWLIQDRGDVDDRLAAAYNEPY
AGVRFLRMDRATIAQWLPAEDGARVEDAIYLVDPLGNLMMRWPKDPDPKKISSDLKKLLKYSRIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25581; Mature: 25581

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METYKRTMNAQTNAMPQPDPTASPDPRIDARTRRGRLQMLMLLLVCASPVLFSYFTYYVI
CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
KPTGGSTNYGVLIDPQRPMPPVQVTNERNESVPLASMRGKWLMVMTDPSACDETCAKKLF
EECCCCCCCCEEECCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHH
TVRQIRVGQGEDRERIVPVWLIQDRGDVDDRLAAAYNEPYAGVRFLRMDRATIAQWLPAE
HHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCC
DGARVEDAIYLVDPLGNLMMRWPKDPDPKKISSDLKKLLKYSRIG
CCCCCCCEEEEECCHHHHHEECCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
METYKRTMNAQTNAMPQPDPTASPDPRIDARTRRGRLQMLMLLLVCASPVLFSYFTYYVI
CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
KPTGGSTNYGVLIDPQRPMPPVQVTNERNESVPLASMRGKWLMVMTDPSACDETCAKKLF
EECCCCCCCCEEECCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHH
TVRQIRVGQGEDRERIVPVWLIQDRGDVDDRLAAAYNEPYAGVRFLRMDRATIAQWLPAE
HHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCC
DGARVEDAIYLVDPLGNLMMRWPKDPDPKKISSDLKKLLKYSRIG
CCCCCCCEEEEECCHHHHHEECCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA