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The map label for this gene is 94309212

Identifier: 94309212

GI number: 94309212

Start: 283666

End: 284484

Strand: Direct

Name: 94309212

Synonym: Rmet_0267

Alternate gene names: NA

Gene position: 283666-284484 (Clockwise)

Preceding gene: 94309210

Following gene: 94309213

Centisome position: 7.22

GC content: 68.99

Gene sequence:

>819_bases
GTGGGGGCCCGTTCTGCGAAGCGCCCATTATCGCACTGCGATGCCCGGAGGGAACCCGTGACGACCCGCACGCTCTGGCG
TTCGCCGGGCACGGTGCCAATGGTGGCGGCGCTCGTGGTGATCGTCGTCACCTGCGCGCTCGGCAACTGGCAACTGCGCC
GCGCGCATGAAAAGATCGACCGTGCGGAGCGGCTGGCCACGCTGGCGAAGCAGGCGCCCGTCGAACTGCGCGCGGGCCAG
ACCGATGCCGCACAACTGGTCGAGCGCCGCGTGCGCGCGCGCGGCACGTTCGACGCGGACAAGACAGTGCTGCTCGACAA
TCGTCCGCACGGCAACGGTACTGACAGCCGTGCGGGGTTCCTCGTGCTCACGCCGTTGCGCCTCACGGACGGTGGCAGCG
TGCTGGTGATGCGTGGCTGGCTGCCTCGCGACGCGCAGGACCGCACGCGCATCGCGCCGTTCCCGACGCCCACGGGGGAA
GTCACTGTCGAAGGCACCGCGCTGGCCGCTGTGCCGCGCGTCTACAGCCTCGGGCAGGATGCTTCCGCGGAGGCCGGACG
CAAGATCCGTCAGAATATCGACCTTGCCGCTTTTTCTCATGAGATCGGGGCGTCACTCCTGCCGGTGGTGGTAGAACAAT
CGGGCGATGCCGGAGATGGACTGGCCCGCGATTGGGCCCCGGCCGATTTCGGCGCGGACCGGCATTACGGGTACGCTACC
CAGTGGTTCGGGCTGGCCGTGTTGACGCTGGTGCTGGTGGCCGTCCTCGGCTGGCGGCGCGCCCGGCTGGACCGGGCAGA
CGGCAATGGAAACCTATAA

Upstream 100 bases:

>100_bases
TCATGTTGGGCGTGCGGCCACGGTCGCGCATCATGAAGAACAGCGCGGAGGCCAGGCTGCCAATGATCAGGATGAAGGCG
ACAAGGATGACGAAGCGCAT

Downstream 100 bases:

>100_bases
ACGAACGATGAACGCACAGACGAACGCCATGCCGCAGCCAGATCCCACGGCTTCGCCGGACCCCCGCATCGACGCGCGCA
CGCGCCGCGGCCGCCTGCAG

Product: putative transmembrane cytochrome oxidase

Products: NA

Alternate protein names: Transmembrane Cytochrome Oxidase; Transmembrane Cytochrome Oxidase Complex Biogenesis Factor; SURF1-Like Protein; Transmembrane Cytochrome Oxidase Complex Protein; Cytochrome C Oxidase Assembly; Surfeit Locus 1-Like Protein; Surfeit Locus 1 Family Protein; Cytochrome Oxidase Complex Biogenesis Factor; Membrane Spanning Protein; Cytochrome Oxidase Assembly Protein SurF1

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MGARSAKRPLSHCDARREPVTTRTLWRSPGTVPMVAALVVIVVTCALGNWQLRRAHEKIDRAERLATLAKQAPVELRAGQ
TDAAQLVERRVRARGTFDADKTVLLDNRPHGNGTDSRAGFLVLTPLRLTDGGSVLVMRGWLPRDAQDRTRIAPFPTPTGE
VTVEGTALAAVPRVYSLGQDASAEAGRKIRQNIDLAAFSHEIGASLLPVVVEQSGDAGDGLARDWAPADFGADRHYGYAT
QWFGLAVLTLVLVAVLGWRRARLDRADGNGNL

Sequences:

>Translated_272_residues
MGARSAKRPLSHCDARREPVTTRTLWRSPGTVPMVAALVVIVVTCALGNWQLRRAHEKIDRAERLATLAKQAPVELRAGQ
TDAAQLVERRVRARGTFDADKTVLLDNRPHGNGTDSRAGFLVLTPLRLTDGGSVLVMRGWLPRDAQDRTRIAPFPTPTGE
VTVEGTALAAVPRVYSLGQDASAEAGRKIRQNIDLAAFSHEIGASLLPVVVEQSGDAGDGLARDWAPADFGADRHYGYAT
QWFGLAVLTLVLVAVLGWRRARLDRADGNGNL
>Mature_271_residues
GARSAKRPLSHCDARREPVTTRTLWRSPGTVPMVAALVVIVVTCALGNWQLRRAHEKIDRAERLATLAKQAPVELRAGQT
DAAQLVERRVRARGTFDADKTVLLDNRPHGNGTDSRAGFLVLTPLRLTDGGSVLVMRGWLPRDAQDRTRIAPFPTPTGEV
TVEGTALAAVPRVYSLGQDASAEAGRKIRQNIDLAAFSHEIGASLLPVVVEQSGDAGDGLARDWAPADFGADRHYGYATQ
WFGLAVLTLVLVAVLGWRRARLDRADGNGNL

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29423; Mature: 29292

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGARSAKRPLSHCDARREPVTTRTLWRSPGTVPMVAALVVIVVTCALGNWQLRRAHEKID
CCCCCCCCCHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RAERLATLAKQAPVELRAGQTDAAQLVERRVRARGTFDADKTVLLDNRPHGNGTDSRAGF
HHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCE
LVLTPLRLTDGGSVLVMRGWLPRDAQDRTRIAPFPTPTGEVTVEGTALAAVPRVYSLGQD
EEEEEEEECCCCCEEEEECCCCCCCCCCCEECCCCCCCCCEEECCHHHHHHHHHHHCCCC
ASAEAGRKIRQNIDLAAFSHEIGASLLPVVVEQSGDAGDGLARDWAPADFGADRHYGYAT
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
QWFGLAVLTLVLVAVLGWRRARLDRADGNGNL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GARSAKRPLSHCDARREPVTTRTLWRSPGTVPMVAALVVIVVTCALGNWQLRRAHEKID
CCCCCCCCHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RAERLATLAKQAPVELRAGQTDAAQLVERRVRARGTFDADKTVLLDNRPHGNGTDSRAGF
HHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCE
LVLTPLRLTDGGSVLVMRGWLPRDAQDRTRIAPFPTPTGEVTVEGTALAAVPRVYSLGQD
EEEEEEEECCCCCEEEEECCCCCCCCCCCEECCCCCCCCCEEECCHHHHHHHHHHHCCCC
ASAEAGRKIRQNIDLAAFSHEIGASLLPVVVEQSGDAGDGLARDWAPADFGADRHYGYAT
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
QWFGLAVLTLVLVAVLGWRRARLDRADGNGNL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA