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The map label for this gene is ctaA [H]

Identifier: 94309214

GI number: 94309214

Start: 285154

End: 286257

Strand: Direct

Name: ctaA [H]

Synonym: Rmet_0269

Alternate gene names: 94309214

Gene position: 285154-286257 (Clockwise)

Preceding gene: 94309213

Following gene: 94309215

Centisome position: 7.26

GC content: 65.58

Gene sequence:

>1104_bases
ATGCTGCTTCAGTTGGCCATCATTGGCATCCTGATTGCGCTGCTGCCCCTGTCCTACGTGATGGTGCGCGGCGATCGCGA
CAAATATCGCAGACTCGTCTGGATCACGGCGTTCCTGACGCTGGACCTGATCATGTTCGGCAGCTTTACCCGGCTGACCG
ACTCCGGCCTTGGCTGCCCCGACTGGCCCGGCTGCTACGGCCACTCGAACCCGCACGCGGCGATGGAGCCGATTCGCGCG
GCGGAAACGGCGCTCCCGAGCGGCCCGGTCACGCTGATGAAAGCGTGGATCGAGATGATCCATCGCTATTTCGCCATGGC
GGTCGGTGTGCTGATCATCTCGCTGATGGTGCTGGCATGGGTCAAGCGCCGGGAACTGAAGCAGTCGCCGTGGTTCGCCA
CCGGCGTGTTCCTGCTGGTCTGCCTGCAGGGCGCGTTCGGCATGTGGACCGTGACGATGAAGCTGCAACCGATCATCGTC
GTCACCCACCTGCTGCTGGCGATGGCGCTGCTGGCGTCGCTGATCCTGCTCGGGTCACGTAACGAACCGCCGCATGTCGT
GGCGCCACAGGCGGCTTCGCTGCGCTGGGCCGGCCTGCTGGCCCTGGTGCTGCTGGTCGTCCAGATCTTCCTGGGCGGCT
GGGTCAGCACCAACTACGCGGTGCTGGCCTGTACCGACTTTCCGCTCTGCAACGGCCAGCTCGTGCCAGAGATGGACTTC
CGCCATGGCTTTACGCTGTGGCGCCAGCTGGGCATGACGGCCGACGGCGACTACATTCCGCACGCGGCGCTGGTGGCTAT
CCACTGGGTGCACCGTGGCTTCGCCTTCGTCGTGCTCGGTTTCCTGCTCTGGTTCGCGCTGCGCGCGCGCCGGATGGAAG
GGCTGGCGCGGCATGCGCGGTGGTTGCTGGTCGTGCTGACGCTGCAGTTGTGCACCGGCATGTCGAACATCGTTTTCGAC
TGGCCGCTGGTCGCGGCGGTGGCCCATAACGGCGGAGCAGCCCTGCTGCTGATGTTGTTGCTCCGTCTCAACTACAATAT
CGGCCTCGCCACTCGCTCCGCCGGCGCCGCCACGCAACCCTCGATTGCCGCGCGCGCCACATGA

Upstream 100 bases:

>100_bases
TCGGCAACCTGATGATGCGCTGGCCGAAGGACCCCGACCCCAAGAAGATCAGCAGCGACCTGAAGAAGCTGCTGAAGTAT
TCCCGTATTGGCTGAATCCC

Downstream 100 bases:

>100_bases
AGGACAAGATGCCCCCCGTGGTAACTGCTACCCACTCCCAATCCTCCGTGGGCCGATTACGCCATCTGGCCCGCCAATAC
GCCGCGCTGACCAAGCCGCG

Product: cytochrome c oxidase assembly

Products: NA

Alternate protein names: HAS; Cytochrome aa3-controlling protein [H]

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MLLQLAIIGILIALLPLSYVMVRGDRDKYRRLVWITAFLTLDLIMFGSFTRLTDSGLGCPDWPGCYGHSNPHAAMEPIRA
AETALPSGPVTLMKAWIEMIHRYFAMAVGVLIISLMVLAWVKRRELKQSPWFATGVFLLVCLQGAFGMWTVTMKLQPIIV
VTHLLLAMALLASLILLGSRNEPPHVVAPQAASLRWAGLLALVLLVVQIFLGGWVSTNYAVLACTDFPLCNGQLVPEMDF
RHGFTLWRQLGMTADGDYIPHAALVAIHWVHRGFAFVVLGFLLWFALRARRMEGLARHARWLLVVLTLQLCTGMSNIVFD
WPLVAAVAHNGGAALLLMLLLRLNYNIGLATRSAGAATQPSIAARAT

Sequences:

>Translated_367_residues
MLLQLAIIGILIALLPLSYVMVRGDRDKYRRLVWITAFLTLDLIMFGSFTRLTDSGLGCPDWPGCYGHSNPHAAMEPIRA
AETALPSGPVTLMKAWIEMIHRYFAMAVGVLIISLMVLAWVKRRELKQSPWFATGVFLLVCLQGAFGMWTVTMKLQPIIV
VTHLLLAMALLASLILLGSRNEPPHVVAPQAASLRWAGLLALVLLVVQIFLGGWVSTNYAVLACTDFPLCNGQLVPEMDF
RHGFTLWRQLGMTADGDYIPHAALVAIHWVHRGFAFVVLGFLLWFALRARRMEGLARHARWLLVVLTLQLCTGMSNIVFD
WPLVAAVAHNGGAALLLMLLLRLNYNIGLATRSAGAATQPSIAARAT
>Mature_367_residues
MLLQLAIIGILIALLPLSYVMVRGDRDKYRRLVWITAFLTLDLIMFGSFTRLTDSGLGCPDWPGCYGHSNPHAAMEPIRA
AETALPSGPVTLMKAWIEMIHRYFAMAVGVLIISLMVLAWVKRRELKQSPWFATGVFLLVCLQGAFGMWTVTMKLQPIIV
VTHLLLAMALLASLILLGSRNEPPHVVAPQAASLRWAGLLALVLLVVQIFLGGWVSTNYAVLACTDFPLCNGQLVPEMDF
RHGFTLWRQLGMTADGDYIPHAALVAIHWVHRGFAFVVLGFLLWFALRARRMEGLARHARWLLVVLTLQLCTGMSNIVFD
WPLVAAVAHNGGAALLLMLLLRLNYNIGLATRSAGAATQPSIAARAT

Specific function: Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group [H]

COG id: COG1612

COG function: function code O; Uncharacterized protein required for cytochrome oxidase assembly

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX15/CtaA family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003780 [H]

Pfam domain/function: PF02628 COX15-CtaA [H]

EC number: NA

Molecular weight: Translated: 40442; Mature: 40442

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLQLAIIGILIALLPLSYVMVRGDRDKYRRLVWITAFLTLDLIMFGSFTRLTDSGLGCP
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC
DWPGCYGHSNPHAAMEPIRAAETALPSGPVTLMKAWIEMIHRYFAMAVGVLIISLMVLAW
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKRRELKQSPWFATGVFLLVCLQGAFGMWTVTMKLQPIIVVTHLLLAMALLASLILLGSR
HHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCC
NEPPHVVAPQAASLRWAGLLALVLLVVQIFLGGWVSTNYAVLACTDFPLCNGQLVPEMDF
CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCH
RHGFTLWRQLGMTADGDYIPHAALVAIHWVHRGFAFVVLGFLLWFALRARRMEGLARHAR
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLLVVLTLQLCTGMSNIVFDWPLVAAVAHNGGAALLLMLLLRLNYNIGLATRSAGAATQP
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCC
SIAARAT
CCCCCCC
>Mature Secondary Structure
MLLQLAIIGILIALLPLSYVMVRGDRDKYRRLVWITAFLTLDLIMFGSFTRLTDSGLGCP
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC
DWPGCYGHSNPHAAMEPIRAAETALPSGPVTLMKAWIEMIHRYFAMAVGVLIISLMVLAW
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKRRELKQSPWFATGVFLLVCLQGAFGMWTVTMKLQPIIVVTHLLLAMALLASLILLGSR
HHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCC
NEPPHVVAPQAASLRWAGLLALVLLVVQIFLGGWVSTNYAVLACTDFPLCNGQLVPEMDF
CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCH
RHGFTLWRQLGMTADGDYIPHAALVAIHWVHRGFAFVVLGFLLWFALRARRMEGLARHAR
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLLVVLTLQLCTGMSNIVFDWPLVAAVAHNGGAALLLMLLLRLNYNIGLATRSAGAATQP
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCC
SIAARAT
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA