| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94309078
Identifier: 94309078
GI number: 94309078
Start: 139272
End: 139799
Strand: Reverse
Name: 94309078
Synonym: Rmet_0133
Alternate gene names: NA
Gene position: 139799-139272 (Counterclockwise)
Preceding gene: 94309080
Following gene: 94309073
Centisome position: 3.56
GC content: 62.88
Gene sequence:
>528_bases ATGAACATCCGCACCCTGCTGGCATCGTTGCTTATCGTTGCCGCCCCCATGGCTTCGGCCCATATCGTTTTCGAACAGAA GCAGGCGCCCGCGGGCAGCTACTACAAGGGCACGTTGCTGGTCGGTCATGGCTGCAACGGCAGCGCGACGCGCGCGGTAA CGGTGACAATCCCGGATGGCGTACAGGGCGTGCATCCGCAACCGAAGCCGGGCTGGCAACTCGAGATCAAACGGGCGAAG CTCGCCAAGCCCTATACCTCGCACGGCAAGACTATCGACGAGGACGTGCATACGATCCGGTGGTTTGGCAACACGCTCGC CGACGAACACTTCGACGAATTCCGCATGCTGATGAAGCTGCCCGAACAGGGCGGCAAGCTCTACTTCCCGGTGCTACAGG AATGCGAGAGCGGCAAGTCCGAGTGGACCCAGATTCCCGCCGATGGCCAGACCACCCGGGACCTGAAGACCCCGGCAGCG GAGCTTGAGGTGTTGCCACCTGCCGGCGGCCACGTGCACTCGCACTGA
Upstream 100 bases:
>100_bases CGGCCTCTCGCCATGTGCTGCGTCACCAGGTCGCACGGCGCAAGGGTGCTTTGGCGCTAGACTGACGCGCTATCACGGCT CGCCATCCTGACCTTTTCCC
Downstream 100 bases:
>100_bases GTAACCGGGCGTCCGACGCCACCCCAAACGAAAAGAGCCGGTCACCCGGCTCTTTTACTTTCAGACTTCGGCCTGCGTTA CAGCACGTAGCGCGACAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MNIRTLLASLLIVAAPMASAHIVFEQKQAPAGSYYKGTLLVGHGCNGSATRAVTVTIPDGVQGVHPQPKPGWQLEIKRAK LAKPYTSHGKTIDEDVHTIRWFGNTLADEHFDEFRMLMKLPEQGGKLYFPVLQECESGKSEWTQIPADGQTTRDLKTPAA ELEVLPPAGGHVHSH
Sequences:
>Translated_175_residues MNIRTLLASLLIVAAPMASAHIVFEQKQAPAGSYYKGTLLVGHGCNGSATRAVTVTIPDGVQGVHPQPKPGWQLEIKRAK LAKPYTSHGKTIDEDVHTIRWFGNTLADEHFDEFRMLMKLPEQGGKLYFPVLQECESGKSEWTQIPADGQTTRDLKTPAA ELEVLPPAGGHVHSH >Mature_175_residues MNIRTLLASLLIVAAPMASAHIVFEQKQAPAGSYYKGTLLVGHGCNGSATRAVTVTIPDGVQGVHPQPKPGWQLEIKRAK LAKPYTSHGKTIDEDVHTIRWFGNTLADEHFDEFRMLMKLPEQGGKLYFPVLQECESGKSEWTQIPADGQTTRDLKTPAA ELEVLPPAGGHVHSH
Specific function: Unknown
COG id: COG4549
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19129; Mature: 19129
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIRTLLASLLIVAAPMASAHIVFEQKQAPAGSYYKGTLLVGHGCNGSATRAVTVTIPDG CCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEEEECCCCCCCEEEEEECCCC VQGVHPQPKPGWQLEIKRAKLAKPYTSHGKTIDEDVHTIRWFGNTLADEHFDEFRMLMKL CCCCCCCCCCCCEEEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH PEQGGKLYFPVLQECESGKSEWTQIPADGQTTRDLKTPAAELEVLPPAGGHVHSH HCCCCEEEHHHHHHHHCCCCHHEECCCCCCCCCCCCCCHHHEEEECCCCCCCCCC >Mature Secondary Structure MNIRTLLASLLIVAAPMASAHIVFEQKQAPAGSYYKGTLLVGHGCNGSATRAVTVTIPDG CCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEEEECCCCCCCEEEEEECCCC VQGVHPQPKPGWQLEIKRAKLAKPYTSHGKTIDEDVHTIRWFGNTLADEHFDEFRMLMKL CCCCCCCCCCCCEEEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH PEQGGKLYFPVLQECESGKSEWTQIPADGQTTRDLKTPAAELEVLPPAGGHVHSH HCCCCEEEHHHHHHHHCCCCHHEECCCCCCCCCCCCCCHHHEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA