| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94309073
Identifier: 94309073
GI number: 94309073
Start: 134333
End: 134842
Strand: Reverse
Name: 94309073
Synonym: Rmet_0128
Alternate gene names: NA
Gene position: 134842-134333 (Counterclockwise)
Preceding gene: 94309078
Following gene: 94309072
Centisome position: 3.43
GC content: 66.08
Gene sequence:
>510_bases ATGACACGCACCACCCCACATGCGGCTGCGTCCGATGACGCAGTCATGCCCGGAGATCCGCTGGCCACGGCGCAATTGCG TCTGCGCCAGCTTGGCGCACGTGTGACGCAACCGCGCCTGGCAATTCTGGCCTGCCTGATCGAAGCACCCGAGCCACTCA CCCACCAGGCCGTGATCGATCACCTGCCGGCCGAAGGCGACGTGGACCGCGTGACCGTGTACCGGGTGCTGGACTGGCTG GTGGACCAGGGCCTGGCACAGAAACGCGCCGGCAACGACCGCGTGTTCCGCTTCTCGCTTGTGGAGCACGAAGCGGCGCG CGCCGAAGTCCATCGACAGCACAGCCACTTTCACTGCACACGCTGCGATCGTACGTTTTGCCTGGAGTCGGCCGGGAAAT CCGTGGCCCCCCGGGTACCCAACGGATTTGCGGTCGAACACGTGGAACTGACGGTCAACGGCATCTGCGCCGAATGCGGC CGATCGCACGGCGACGCATCCGCGCACTGA
Upstream 100 bases:
>100_bases TGTGCCGATCATAGGCTGAATCCCGGCGCACCGCCGTCTCGAAGACCCTGTTGGTGCAACTGAATTGCATCGGGTAGGGG CCTATGGTTAAATCCTTCGC
Downstream 100 bases:
>100_bases CACATCCAGACACCTTTAGACGGCGAGCCCTTTTCTCGGAGTACCACAACATGTCCAAACTGATTCCGGTCACGATCCTT ACCGGCTTCCTCGGCAGCGG
Product: putative ferric uptake regulator, Fur family
Products: NA
Alternate protein names: Ferric Uptake Regulator Family Protein; FUR Family Transcriptional Regulator; Transcription Regulator Protein; Ferric Uptake Trancriptional Regulator Fur Family; Ferric Uptake Regulation Protein; Regulatory Protein; Ferric Uptake Regulator; Fe2+/Zn2+ Uptake Transcription Regulator Protein; Transcription Regulator; Cobalamin Synthesis Protein; Transcriptional Regulator Fur Family; Ferric Uptake Regulation Protein Fur
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MTRTTPHAAASDDAVMPGDPLATAQLRLRQLGARVTQPRLAILACLIEAPEPLTHQAVIDHLPAEGDVDRVTVYRVLDWL VDQGLAQKRAGNDRVFRFSLVEHEAARAEVHRQHSHFHCTRCDRTFCLESAGKSVAPRVPNGFAVEHVELTVNGICAECG RSHGDASAH
Sequences:
>Translated_169_residues MTRTTPHAAASDDAVMPGDPLATAQLRLRQLGARVTQPRLAILACLIEAPEPLTHQAVIDHLPAEGDVDRVTVYRVLDWL VDQGLAQKRAGNDRVFRFSLVEHEAARAEVHRQHSHFHCTRCDRTFCLESAGKSVAPRVPNGFAVEHVELTVNGICAECG RSHGDASAH >Mature_168_residues TRTTPHAAASDDAVMPGDPLATAQLRLRQLGARVTQPRLAILACLIEAPEPLTHQAVIDHLPAEGDVDRVTVYRVLDWLV DQGLAQKRAGNDRVFRFSLVEHEAARAEVHRQHSHFHCTRCDRTFCLESAGKSVAPRVPNGFAVEHVELTVNGICAECGR SHGDASAH
Specific function: Unknown
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18481; Mature: 18350
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTTPHAAASDDAVMPGDPLATAQLRLRQLGARVTQPRLAILACLIEAPEPLTHQAVID CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHH HLPAEGDVDRVTVYRVLDWLVDQGLAQKRAGNDRVFRFSLVEHEAARAEVHRQHSHFHCT HCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCEEEE RCDRTFCLESAGKSVAPRVPNGFAVEHVELTVNGICAECGRSHGDASAH CCCHHHHHHHCCCCCCCCCCCCCEEEEEEEEHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TRTTPHAAASDDAVMPGDPLATAQLRLRQLGARVTQPRLAILACLIEAPEPLTHQAVID CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHH HLPAEGDVDRVTVYRVLDWLVDQGLAQKRAGNDRVFRFSLVEHEAARAEVHRQHSHFHCT HCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCEEEE RCDRTFCLESAGKSVAPRVPNGFAVEHVELTVNGICAECGRSHGDASAH CCCHHHHHHHCCCCCCCCCCCCCEEEEEEEEHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA