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The map label for this gene is ycjP [H]

Identifier: 94308953

GI number: 94308953

Start: 12151

End: 13038

Strand: Reverse

Name: ycjP [H]

Synonym: Rmet_0008

Alternate gene names: 94308953

Gene position: 13038-12151 (Counterclockwise)

Preceding gene: 94308954

Following gene: 94308952

Centisome position: 0.33

GC content: 60.92

Gene sequence:

>888_bases
ATGGAAGCGATATCGACATCCGGAGGCTGGAAGCTGGCGTGGCTCGGGTCGCGCTGGCCCGCACGCTGCGCGTGGGTAGC
GGTGTTCGCCACGTTGGCGACTTTTGCCGTGTTCTGCGCCTTTCCGTTCTACTGGATGCTGATCACCACGTTCAAGGATG
TGCACGACCTGATCAACACGGCCAACAATCCGTTCGTGTTCAATCTGCCACCCACGACGGAGAACCTGCGGGTGCTGTTC
CAGGAAACCGCATTCCTGCGATGGCTGCTCAACACGCTGCTGGTGGGCGTTTTCGTGGTCATCATCACGCTCGTGCTCGC
GGTACCGGCGGGCTACAGCCTGGCGCGACTATCGGGACCCCGAGGGCGGCAACTCGCCATCGCCATCTTCCTGACTTATC
TGATTCCGCCCACGATCCTGTTCATTCCGTTCTCCCGCATCGTCGGCGCGCTGGGCCTGCAGGACTCGCTCTGGTCGCTC
GTGCTCGTGTACCCGAGCTTTACCGTGCCGTTCTGCACCTGGCTGATGATGGGCTTCTTCAAGGCGGTGCCCCGGGACAT
CGAGGAAGCCGCGATGATGGATGGCATGAGCCGCTTTGGCGCGTTCCTGAAAGTCATCGTGCCGCTATCGTCAGCGGGCA
TTCTCACCGTGATCATCTTCACGCTGACGCTGGTGATGCAGGAGTTCGTCTACGCGCTGACGTTCATCACGAGTTCCTCG
CAGTACACGGTCAGCGTGGGCGTGCCCACTTTCCTTGTGCGCGGCGACGTCTATTTCTGGGGCTCGCTGATGGGTGCATG
CCTGATCGTCAGCGTGCCGGTAGCGCTGCTGTACAACGTGTTCCTCGATCGCTTTGTCACCGCTTTCACCGTGGGCGCGA
TAAAGTAG

Upstream 100 bases:

>100_bases
CTGGCTGAAGGCGCAGCGATCTCGCTTTTCCTGTTTCCACTGCTGGTGGCAGTCGTCACGTTGCTGCTGACTGTGGCGCA
TCGCTCCGAGGTGACGTGAC

Downstream 100 bases:

>100_bases
CGGTGTCGCACGAATGGCCAGACGAATGGGAGCGCAAATGGCCGGAGGCCAGTTCCAGATATTCCGCTGTCATGTTGCCG
GCACACAGGCTGTGCAGGCC

Product: Binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MEAISTSGGWKLAWLGSRWPARCAWVAVFATLATFAVFCAFPFYWMLITTFKDVHDLINTANNPFVFNLPPTTENLRVLF
QETAFLRWLLNTLLVGVFVVIITLVLAVPAGYSLARLSGPRGRQLAIAIFLTYLIPPTILFIPFSRIVGALGLQDSLWSL
VLVYPSFTVPFCTWLMMGFFKAVPRDIEEAAMMDGMSRFGAFLKVIVPLSSAGILTVIIFTLTLVMQEFVYALTFITSSS
QYTVSVGVPTFLVRGDVYFWGSLMGACLIVSVPVALLYNVFLDRFVTAFTVGAIK

Sequences:

>Translated_295_residues
MEAISTSGGWKLAWLGSRWPARCAWVAVFATLATFAVFCAFPFYWMLITTFKDVHDLINTANNPFVFNLPPTTENLRVLF
QETAFLRWLLNTLLVGVFVVIITLVLAVPAGYSLARLSGPRGRQLAIAIFLTYLIPPTILFIPFSRIVGALGLQDSLWSL
VLVYPSFTVPFCTWLMMGFFKAVPRDIEEAAMMDGMSRFGAFLKVIVPLSSAGILTVIIFTLTLVMQEFVYALTFITSSS
QYTVSVGVPTFLVRGDVYFWGSLMGACLIVSVPVALLYNVFLDRFVTAFTVGAIK
>Mature_295_residues
MEAISTSGGWKLAWLGSRWPARCAWVAVFATLATFAVFCAFPFYWMLITTFKDVHDLINTANNPFVFNLPPTTENLRVLF
QETAFLRWLLNTLLVGVFVVIITLVLAVPAGYSLARLSGPRGRQLAIAIFLTYLIPPTILFIPFSRIVGALGLQDSLWSL
VLVYPSFTVPFCTWLMMGFFKAVPRDIEEAAMMDGMSRFGAFLKVIVPLSSAGILTVIIFTLTLVMQEFVYALTFITSSS
QYTVSVGVPTFLVRGDVYFWGSLMGACLIVSVPVALLYNVFLDRFVTAFTVGAIK

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=274, Percent_Identity=29.5620437956204, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1790464, Length=217, Percent_Identity=23.963133640553, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32714; Mature: 32714

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAISTSGGWKLAWLGSRWPARCAWVAVFATLATFAVFCAFPFYWMLITTFKDVHDLINT
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ANNPFVFNLPPTTENLRVLFQETAFLRWLLNTLLVGVFVVIITLVLAVPAGYSLARLSGP
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC
RGRQLAIAIFLTYLIPPTILFIPFSRIVGALGLQDSLWSLVLVYPSFTVPFCTWLMMGFF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
KAVPRDIEEAAMMDGMSRFGAFLKVIVPLSSAGILTVIIFTLTLVMQEFVYALTFITSSS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QYTVSVGVPTFLVRGDVYFWGSLMGACLIVSVPVALLYNVFLDRFVTAFTVGAIK
CEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEAISTSGGWKLAWLGSRWPARCAWVAVFATLATFAVFCAFPFYWMLITTFKDVHDLINT
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ANNPFVFNLPPTTENLRVLFQETAFLRWLLNTLLVGVFVVIITLVLAVPAGYSLARLSGP
CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC
RGRQLAIAIFLTYLIPPTILFIPFSRIVGALGLQDSLWSLVLVYPSFTVPFCTWLMMGFF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
KAVPRDIEEAAMMDGMSRFGAFLKVIVPLSSAGILTVIIFTLTLVMQEFVYALTFITSSS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
QYTVSVGVPTFLVRGDVYFWGSLMGACLIVSVPVALLYNVFLDRFVTAFTVGAIK
CEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]