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The map label for this gene is ycjO [C]

Identifier: 94308954

GI number: 94308954

Start: 13040

End: 13972

Strand: Reverse

Name: ycjO [C]

Synonym: Rmet_0009

Alternate gene names: 94308954

Gene position: 13972-13040 (Counterclockwise)

Preceding gene: 94308955

Following gene: 94308953

Centisome position: 0.36

GC content: 61.74

Gene sequence:

>933_bases
ATGAGCGCGCTATCGGCCACCCTTGGCAGACCGGACCACGAGACGTCGGATACGCCGGATGATGACCGCAGGCTAGGCGC
AATGATGCTGGCGCCTGCACTCATCTATATCGCGCTGCTGCTTGGCTTTCCTTTCCTGCTGTCGATCTGGTACAGCCTGA
CCGATGTCACCGTCGGAAGTCCGATGCCGCATTTCATCGGGCTGGAGAATTTCCGGAGCGTCGTAGCGAACCCGACGTTC
TGGCAATCGCTGCGCAACGCGCTGGTGTTCACGCTGGTCTCGCAAGCGCTGGTGGTCGTGCTCGCCAAAGCGCTGGCGCT
GGCGTTGGTGCGTGACTTCCCCGGCAAGTGGCTCGTGCGACTGCTGATCCTGTTGCCATGGGTGGCGCCGATCTCGCTGG
GATCGATTGGCTGGTTGTGGATCTTCGACCCGGTCTACAGCATCATCAACTGGACGTTACGCGCGATCGGCCTTTTCGGC
CCTAACACGTGGCCGATCTGGCTCGGCCAGCCTGATCTGGCAATGGCGTCCGTGATTCTGGTGGATGTCTGGCGATTGCT
GCCACTGGCCACCGTCATCATCCTGGCCGGGATGCAAGGCATCCCGCAGGATCTGCACGATGCCGCTGCCATGGACGGCG
CAGGCTTCTGGCGGCGGCTGTTCAGGATCGACGTGCCGTTGCTGATGCCGGTCATGCTGGTGGCCCTGTTGTTCGGCATC
GTCTTCACGCTGACCGACATGGTCATCATTTACGTGCTCACGCGCGGCGGCCCCTACGATACGACCCAGGTGCTGGCCAG
CCTGGCCTTCTTTACAGGCATACAAGGCGGTGATCTGGCTGAAGGCGCAGCGATCTCGCTTTTCCTGTTTCCACTGCTGG
TGGCAGTCGTCACGTTGCTGCTGACTGTGGCGCATCGCTCCGAGGTGACGTGA

Upstream 100 bases:

>100_bases
CGCAACCTGGCACGCGTCACATGTTCGCCGTGCGCCGTGCTGATCTGCACCACTTCGACACGAGCAGTGGCACAAGCCTG
AGCGTGGCGGAAGGCGTGAC

Downstream 100 bases:

>100_bases
CATGGAAGCGATATCGACATCCGGAGGCTGGAAGCTGGCGTGGCTCGGGTCGCGCTGGCCCGCACGCTGCGCGTGGGTAG
CGGTGTTCGCCACGTTGGCG

Product: Binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MSALSATLGRPDHETSDTPDDDRRLGAMMLAPALIYIALLLGFPFLLSIWYSLTDVTVGSPMPHFIGLENFRSVVANPTF
WQSLRNALVFTLVSQALVVVLAKALALALVRDFPGKWLVRLLILLPWVAPISLGSIGWLWIFDPVYSIINWTLRAIGLFG
PNTWPIWLGQPDLAMASVILVDVWRLLPLATVIILAGMQGIPQDLHDAAAMDGAGFWRRLFRIDVPLLMPVMLVALLFGI
VFTLTDMVIIYVLTRGGPYDTTQVLASLAFFTGIQGGDLAEGAAISLFLFPLLVAVVTLLLTVAHRSEVT

Sequences:

>Translated_310_residues
MSALSATLGRPDHETSDTPDDDRRLGAMMLAPALIYIALLLGFPFLLSIWYSLTDVTVGSPMPHFIGLENFRSVVANPTF
WQSLRNALVFTLVSQALVVVLAKALALALVRDFPGKWLVRLLILLPWVAPISLGSIGWLWIFDPVYSIINWTLRAIGLFG
PNTWPIWLGQPDLAMASVILVDVWRLLPLATVIILAGMQGIPQDLHDAAAMDGAGFWRRLFRIDVPLLMPVMLVALLFGI
VFTLTDMVIIYVLTRGGPYDTTQVLASLAFFTGIQGGDLAEGAAISLFLFPLLVAVVTLLLTVAHRSEVT
>Mature_309_residues
SALSATLGRPDHETSDTPDDDRRLGAMMLAPALIYIALLLGFPFLLSIWYSLTDVTVGSPMPHFIGLENFRSVVANPTFW
QSLRNALVFTLVSQALVVVLAKALALALVRDFPGKWLVRLLILLPWVAPISLGSIGWLWIFDPVYSIINWTLRAIGLFGP
NTWPIWLGQPDLAMASVILVDVWRLLPLATVIILAGMQGIPQDLHDAAAMDGAGFWRRLFRIDVPLLMPVMLVALLFGIV
FTLTDMVIIYVLTRGGPYDTTQVLASLAFFTGIQGGDLAEGAAISLFLFPLLVAVVTLLLTVAHRSEVT

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=235, Percent_Identity=29.7872340425532, Blast_Score=104, Evalue=8e-24,
Organism=Escherichia coli, GI1789861, Length=296, Percent_Identity=31.0810810810811, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1790465, Length=256, Percent_Identity=28.515625, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33932; Mature: 33801

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALSATLGRPDHETSDTPDDDRRLGAMMLAPALIYIALLLGFPFLLSIWYSLTDVTVGS
CCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PMPHFIGLENFRSVVANPTFWQSLRNALVFTLVSQALVVVLAKALALALVRDFPGKWLVR
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LLILLPWVAPISLGSIGWLWIFDPVYSIINWTLRAIGLFGPNTWPIWLGQPDLAMASVIL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHH
VDVWRLLPLATVIILAGMQGIPQDLHDAAAMDGAGFWRRLFRIDVPLLMPVMLVALLFGI
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHH
VFTLTDMVIIYVLTRGGPYDTTQVLASLAFFTGIQGGDLAEGAAISLFLFPLLVAVVTLL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LTVAHRSEVT
HHHHHHHCCC
>Mature Secondary Structure 
SALSATLGRPDHETSDTPDDDRRLGAMMLAPALIYIALLLGFPFLLSIWYSLTDVTVGS
CCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC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HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA