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The map label for this gene is nqrC [H]

Identifier: 93007250

GI number: 93007250

Start: 2999755

End: 3000687

Strand: Direct

Name: nqrC [H]

Synonym: Pcryo_2426

Alternate gene names: 93007250

Gene position: 2999755-3000687 (Clockwise)

Preceding gene: 93007249

Following gene: 93007251

Centisome position: 98.04

GC content: 46.95

Gene sequence:

>933_bases
ATGTCCAAGCCCAAAAGTAATAACGCAAAAACCATCAGTGTGGCGTTGACGCTATGCTTGGTGTGTTCGGTATTGGTCTC
AGCTGCGGCTGTGGGTCTAAAGCCTGCGCAAGTAGAAAACGCGCGCTTAGACCGTAATAAAAACATCTTGGTTGCCGCTG
GTATGTTTGACCCTGCGTCTGATACCAATGAAGATGTGGCGGAGCGCTTTAAAGATTTTGAGGTAAAAATCGTTGACCTA
AATAAAGGCAACTACCTTGATGATGACGCGCTGACCGCTGCTGGCATCCCTGACCGTAATGCTTATGACGCCAGCCAAGC
AACTAAGAATAAAGCACTGAGTGAAGATTTGGGTGGTAATGATCCTGCCGGTATCGGTCGTAAGCCTAAATATGCCAAAG
TTTATGTCAAAAATGACGACGCTGGACAACCTGAAATAGTGGTACTACCGATCCAAGGCTACGGTCTTTGGGGTACTATC
TATGGTTTCTTGACCCTTGAAAGCGACATGAATACCATCAAAGGTATCAGTTTCTATGACCATAAAGAAACTCCAGGTCT
AGGCGCTCGTATCGAAGAGCCAGAATGGCGTGCGATGTGGAGTGGTATTCATTCTTATGATGACAAAGGTGCCGTTGCTA
CTGGCGTAACCAAAGCTGGTAACCCAAAAGAGAACTGGGTTGACGGTATCAGTGGTGCAACTTTGACCAGTCGCGGCGTC
AGTAACATGATCCAGTTTTGGCTTGGCGAGCAAGGCTATAAGCCGTACTTAGATCAGCTGCGTAAAGAGAGTGGTGAAAC
ACTGGTAGACGCTGAAGTAAAAGCAAGTCAAAGCCCTTATAAAAAACTGGGTCAAAACTTACATCAACAGCAGGCGCATT
CTGTAACCGAACTGGTAGCAGTGATACCAGCAGCACACGGCAAGGAGGCATAA

Upstream 100 bases:

>100_bases
ATCATGCTAGCCATTTTATTTGCTAACTTATTTGCGCCACTGTTTGACTATTTTGTCACTCAAGCAAATATCAAACGCCA
AACTGCTCGGAGGGTTCGCT

Downstream 100 bases:

>100_bases
CATGGCTGATACAAAAAGTATTTTAACCTCGCCCATTTTTGATAATAACCCTATTGCTCTACAGATATTAGGTATCTGTT
CGGCATTGGCGGTAACGACC

Product: Na(+)-translocating NADH-quinone reductase subunit C

Products: NA

Alternate protein names: Na(+)-NQR subunit C; Na(+)-translocating NQR subunit C; NQR complex subunit C; NQR-1 subunit C [H]

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MSKPKSNNAKTISVALTLCLVCSVLVSAAAVGLKPAQVENARLDRNKNILVAAGMFDPASDTNEDVAERFKDFEVKIVDL
NKGNYLDDDALTAAGIPDRNAYDASQATKNKALSEDLGGNDPAGIGRKPKYAKVYVKNDDAGQPEIVVLPIQGYGLWGTI
YGFLTLESDMNTIKGISFYDHKETPGLGARIEEPEWRAMWSGIHSYDDKGAVATGVTKAGNPKENWVDGISGATLTSRGV
SNMIQFWLGEQGYKPYLDQLRKESGETLVDAEVKASQSPYKKLGQNLHQQQAHSVTELVAVIPAAHGKEA

Sequences:

>Translated_310_residues
MSKPKSNNAKTISVALTLCLVCSVLVSAAAVGLKPAQVENARLDRNKNILVAAGMFDPASDTNEDVAERFKDFEVKIVDL
NKGNYLDDDALTAAGIPDRNAYDASQATKNKALSEDLGGNDPAGIGRKPKYAKVYVKNDDAGQPEIVVLPIQGYGLWGTI
YGFLTLESDMNTIKGISFYDHKETPGLGARIEEPEWRAMWSGIHSYDDKGAVATGVTKAGNPKENWVDGISGATLTSRGV
SNMIQFWLGEQGYKPYLDQLRKESGETLVDAEVKASQSPYKKLGQNLHQQQAHSVTELVAVIPAAHGKEA
>Mature_309_residues
SKPKSNNAKTISVALTLCLVCSVLVSAAAVGLKPAQVENARLDRNKNILVAAGMFDPASDTNEDVAERFKDFEVKIVDLN
KGNYLDDDALTAAGIPDRNAYDASQATKNKALSEDLGGNDPAGIGRKPKYAKVYVKNDDAGQPEIVVLPIQGYGLWGTIY
GFLTLESDMNTIKGISFYDHKETPGLGARIEEPEWRAMWSGIHSYDDKGAVATGVTKAGNPKENWVDGISGATLTSRGVS
NMIQFWLGEQGYKPYLDQLRKESGETLVDAEVKASQSPYKKLGQNLHQQQAHSVTELVAVIPAAHGKEA

Specific function: NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to nqrE are probably involved in the second step, the conversion of ubisemiqui

COG id: COG2869

COG function: function code C; Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC

Gene ontology:

Cell location: Cell inner membrane (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nqrC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007329
- InterPro:   IPR010204 [H]

Pfam domain/function: PF04205 FMN_bind [H]

EC number: NA

Molecular weight: Translated: 33470; Mature: 33339

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPKSNNAKTISVALTLCLVCSVLVSAAAVGLKPAQVENARLDRNKNILVAAGMFDPAS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHCCCCCCEEEEECCCCCCC
DTNEDVAERFKDFEVKIVDLNKGNYLDDDALTAAGIPDRNAYDASQATKNKALSEDLGGN
CCCHHHHHHHCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCC
DPAGIGRKPKYAKVYVKNDDAGQPEIVVLPIQGYGLWGTIYGFLTLESDMNTIKGISFYD
CCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCHHEEEEEEEEECCCCHHHCCCEEEC
HKETPGLGARIEEPEWRAMWSGIHSYDDKGAVATGVTKAGNPKENWVDGISGATLTSRGV
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHCCCCCCCHHHHHH
SNMIQFWLGEQGYKPYLDQLRKESGETLVDAEVKASQSPYKKLGQNLHQQQAHSVTELVA
HHHHHHHHCCCCCHHHHHHHHHHCCCEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
VIPAAHGKEA
HHCCCCCCCC
>Mature Secondary Structure 
SKPKSNNAKTISVALTLCLVCSVLVSAAAVGLKPAQVENARLDRNKNILVAAGMFDPAS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHCCCCCCEEEEECCCCCCC
DTNEDVAERFKDFEVKIVDLNKGNYLDDDALTAAGIPDRNAYDASQATKNKALSEDLGGN
CCCHHHHHHHCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCC
DPAGIGRKPKYAKVYVKNDDAGQPEIVVLPIQGYGLWGTIYGFLTLESDMNTIKGISFYD
CCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCHHEEEEEEEEECCCCHHHCCCEEEC
HKETPGLGARIEEPEWRAMWSGIHSYDDKGAVATGVTKAGNPKENWVDGISGATLTSRGV
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHCCCCCCCHHHHHH
SNMIQFWLGEQGYKPYLDQLRKESGETLVDAEVKASQSPYKKLGQNLHQQQAHSVTELVA
HHHHHHHHCCCCCHHHHHHHHHHCCCEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
VIPAAHGKEA
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]