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The map label for this gene is hslR [H]

Identifier: 93006294

GI number: 93006294

Start: 1809347

End: 1809787

Strand: Direct

Name: hslR [H]

Synonym: Pcryo_1468

Alternate gene names: 93006294

Gene position: 1809347-1809787 (Clockwise)

Preceding gene: 93006293

Following gene: 93006295

Centisome position: 59.13

GC content: 47.17

Gene sequence:

>441_bases
ATGAGTAAACATAATAAAAACCACAATCAGCCCAGTCATAGCAATCCTGATGCTGTTCGTATGCGTCTTGATAAATGGTT
ATGGGCTGCACGCTTTTACCGCACTCGCACTCTTGCCAAAGAAGCCATCGAAAGCGGGCGCGTACATTACGCAGGTAGCC
GCGCAAAGACCAGTAAAGAGATTACCGTTGGCGATGAATTGCAGATTCGTCAAGGATCAGCCACTGCCATGACTGAAAAG
ACAGTCGTTGTTGAAGCACTAACGGCGCAACGCGGTAACGCAACAGCAGCTGAAGTATTGTATTCAGAAACCGAAGAAAG
CATCGCTCGCCGTGCCTATTATGCTGAGCAGCGTAAACTTGCCAACCTTGCCCGTCCAGACAACAAACCCAATAAAAAAG
AGCGCCGTGATTTACATCGTTTTAAGAGCAATCAAGATTAG

Upstream 100 bases:

>100_bases
TAACTTCAATGACAAAAACGATGTTAATCGCTCAATGCTCTTTTAATTATTAAAAATACCACCATTATAATCTTACGTTA
TTGATATCTATGAGGTTTTG

Downstream 100 bases:

>100_bases
CTCTGTTGGTAAGATCAGCAATAACATCGCCTCATCTTAAGTAATAATACGGCTAGCGGGTATGCATGAAGTGCTGACCC
TATTGTTTACTCTCTGCCCT

Product: RNA-binding S4

Products: NA

Alternate protein names: HSP15 [H]

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSKHNKNHNQPSHSNPDAVRMRLDKWLWAARFYRTRTLAKEAIESGRVHYAGSRAKTSKEITVGDELQIRQGSATAMTEK
TVVVEALTAQRGNATAAEVLYSETEESIARRAYYAEQRKLANLARPDNKPNKKERRDLHRFKSNQD

Sequences:

>Translated_146_residues
MSKHNKNHNQPSHSNPDAVRMRLDKWLWAARFYRTRTLAKEAIESGRVHYAGSRAKTSKEITVGDELQIRQGSATAMTEK
TVVVEALTAQRGNATAAEVLYSETEESIARRAYYAEQRKLANLARPDNKPNKKERRDLHRFKSNQD
>Mature_145_residues
SKHNKNHNQPSHSNPDAVRMRLDKWLWAARFYRTRTLAKEAIESGRVHYAGSRAKTSKEITVGDELQIRQGSATAMTEKT
VVVEALTAQRGNATAAEVLYSETEESIARRAYYAEQRKLANLARPDNKPNKKERRDLHRFKSNQD

Specific function: Involved in the recycling of free 50S ribosomal subunits that still carry a nascent chain. Binds RNA more specifically than DNA. Binds with very high affinity to the free 50S ribosomal subunit. Does not bind it when it is part of the 70S ribosome [H]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789803, Length=127, Percent_Identity=53.5433070866142, Blast_Score=129, Evalue=7e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002942 [H]

Pfam domain/function: PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 16724; Mature: 16593

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKHNKNHNQPSHSNPDAVRMRLDKWLWAARFYRTRTLAKEAIESGRVHYAGSRAKTSKE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC
ITVGDELQIRQGSATAMTEKTVVVEALTAQRGNATAAEVLYSETEESIARRAYYAEQRKL
EECCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ANLARPDNKPNKKERRDLHRFKSNQD
HHHCCCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SKHNKNHNQPSHSNPDAVRMRLDKWLWAARFYRTRTLAKEAIESGRVHYAGSRAKTSKE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC
ITVGDELQIRQGSATAMTEKTVVVEALTAQRGNATAAEVLYSETEESIARRAYYAEQRKL
EECCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ANLARPDNKPNKKERRDLHRFKSNQD
HHHCCCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]