| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is ilvA [H]
Identifier: 93006293
GI number: 93006293
Start: 1807541
End: 1809094
Strand: Direct
Name: ilvA [H]
Synonym: Pcryo_1467
Alternate gene names: 93006293
Gene position: 1807541-1809094 (Clockwise)
Preceding gene: 93006287
Following gene: 93006294
Centisome position: 59.07
GC content: 46.33
Gene sequence:
>1554_bases ATGCTGTCACATTGGGTACGAGCCATCTTGCAAGCCACCGTCTATGACGTTGCTATTCAAACACCACTTGAAGCGGCACC CAAACTGACCCAACGTTTTACTAATGACATTCGTTTTAAACGTGAAGACCTGCAACCGGTAAAGTCCTTTAAACTGCGCG GCGCTTATAACCGCATTAGCCAATTAAATGATGAGCAAAAAGCACGTGGCGTGATTTGCGCATCGGCAGGTAACCATGCC CAAGGGGTTGCCTACTCTGCTCGTAAACTTGCTCTTAATAACATTATCGTTATGCCAACTACTACTCCTGATATCAAAGT AGATGCCGTCAGAGCACTTGGCGGCAATGTCGACTTGTACGGTGATAGCTTTGATGAAGCCAATCGCTATGCCATTGATC GCGCTGAGCGTGAAGGTCTGACTTTTATCCCACCATATGATGATGAGCTGGTGATTGCTGGACAAGGTACCATCGGGCTT GAGCTCACCCAGCAATGGCGCAATATGGATTACGTTTTTGTAGCAGTTGGTGGTGGTGGTCTGATTTCTGGCGTCGCTGC ATTTTTGGGCGAAGTTGCCCCGCATGTCAAAGTCATCGCTGTAGAAGCCGACCAATCAGCGTCACTAAAAGCGGCGCTTG AAGCCAATGAGCGAGTCAAACTTGAACAAGTAGGACTGTTCGTCGATGGTGTGGCAGTTGCCCAAATCGGCGAATTACCG TTTGATATTGTTCGTATGCAGAAGAGCGATAAGTCCGGTCCTGTCGTCGATCCTGAAGTCGTCACTTGTACCAATGATGA AGTTTGCGCTGCTGTCAAAGATATCTTTGAAGAGAACCGTAGTATCGTTGAGCCTGCTGGCGCGCTGCCAGTTGCTGGTA TGAAAAAATACATCGAGGCTCATAACCTACAAGGCAAAAACTGCGTCGCCATCATTTGCGGTGCTAATATGAATTTTGAT CGCTTGCGCTACATCGCTGAGCGTACTGAGATTGGTGAGAAAAAAGAAGCCATCTTTGGCGTAACGATCCCTGAGCAGAC TGGCGCTTTCTTAAACTTCTGTCGTAGCCTACACGGTCGTAATATTACTGAGTTTAATTACCGTGCTGATAGTAAAAAAT CACCTGATTCTATGGAACCTGCGGCGATATTCGTTGGGATTGCATTAAAAGAAGGTGACAAAGAGCGTCAAACCATCCGT ACGCAATTGGTAGCTGATGGCTATACAGCACACGACTTGACCGATGACGATGTCGCCAAATCCCATATCCGCCATCTGAT TGGTGGCCATGCGCATGTTGAAAATGAGCAATTATTACAAGTCACTTTCCCAGAACGTCCAGGTGCTTTATTGACCTTTT TAGAAAAATTGGGTGACGATTTTAATATTACCTTGTTTCATTATCGCAATCATGGCGCTGCTGAAGGTCGAGTATTGGTC GGTTTACAAGCTTCTGAGGGTAACTCTCGCCAGCTACAAGATGCGCTGCTCGATATCGGTTACGACTGCACCATGCTTAA TGATAATGTTGGTTATCAGTTGTTTTTGAAATAA
Upstream 100 bases:
>100_bases ATTTTTATCATTCTCTGCATTTTTTGTCGCTGATAGCGACTCGCTTGTTTACTTATAATTCACCGCACTTTTTCATACAT ACTCTAGTTTAGGAATCATT
Downstream 100 bases:
>100_bases AACTAAACATAGACTATCAATTCATCAGTGGCCGAAAGCATTGCTCCCAAATGACATAATGCACAGAAGCCACTTAAATC TTATAGCACTGTCCTAATAC
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 517; Mature: 517
Protein sequence:
>517_residues MLSHWVRAILQATVYDVAIQTPLEAAPKLTQRFTNDIRFKREDLQPVKSFKLRGAYNRISQLNDEQKARGVICASAGNHA QGVAYSARKLALNNIIVMPTTTPDIKVDAVRALGGNVDLYGDSFDEANRYAIDRAEREGLTFIPPYDDELVIAGQGTIGL ELTQQWRNMDYVFVAVGGGGLISGVAAFLGEVAPHVKVIAVEADQSASLKAALEANERVKLEQVGLFVDGVAVAQIGELP FDIVRMQKSDKSGPVVDPEVVTCTNDEVCAAVKDIFEENRSIVEPAGALPVAGMKKYIEAHNLQGKNCVAIICGANMNFD RLRYIAERTEIGEKKEAIFGVTIPEQTGAFLNFCRSLHGRNITEFNYRADSKKSPDSMEPAAIFVGIALKEGDKERQTIR TQLVADGYTAHDLTDDDVAKSHIRHLIGGHAHVENEQLLQVTFPERPGALLTFLEKLGDDFNITLFHYRNHGAAEGRVLV GLQASEGNSRQLQDALLDIGYDCTMLNDNVGYQLFLK
Sequences:
>Translated_517_residues MLSHWVRAILQATVYDVAIQTPLEAAPKLTQRFTNDIRFKREDLQPVKSFKLRGAYNRISQLNDEQKARGVICASAGNHA QGVAYSARKLALNNIIVMPTTTPDIKVDAVRALGGNVDLYGDSFDEANRYAIDRAEREGLTFIPPYDDELVIAGQGTIGL ELTQQWRNMDYVFVAVGGGGLISGVAAFLGEVAPHVKVIAVEADQSASLKAALEANERVKLEQVGLFVDGVAVAQIGELP FDIVRMQKSDKSGPVVDPEVVTCTNDEVCAAVKDIFEENRSIVEPAGALPVAGMKKYIEAHNLQGKNCVAIICGANMNFD RLRYIAERTEIGEKKEAIFGVTIPEQTGAFLNFCRSLHGRNITEFNYRADSKKSPDSMEPAAIFVGIALKEGDKERQTIR TQLVADGYTAHDLTDDDVAKSHIRHLIGGHAHVENEQLLQVTFPERPGALLTFLEKLGDDFNITLFHYRNHGAAEGRVLV GLQASEGNSRQLQDALLDIGYDCTMLNDNVGYQLFLK >Mature_517_residues MLSHWVRAILQATVYDVAIQTPLEAAPKLTQRFTNDIRFKREDLQPVKSFKLRGAYNRISQLNDEQKARGVICASAGNHA QGVAYSARKLALNNIIVMPTTTPDIKVDAVRALGGNVDLYGDSFDEANRYAIDRAEREGLTFIPPYDDELVIAGQGTIGL ELTQQWRNMDYVFVAVGGGGLISGVAAFLGEVAPHVKVIAVEADQSASLKAALEANERVKLEQVGLFVDGVAVAQIGELP FDIVRMQKSDKSGPVVDPEVVTCTNDEVCAAVKDIFEENRSIVEPAGALPVAGMKKYIEAHNLQGKNCVAIICGANMNFD RLRYIAERTEIGEKKEAIFGVTIPEQTGAFLNFCRSLHGRNITEFNYRADSKKSPDSMEPAAIFVGIALKEGDKERQTIR TQLVADGYTAHDLTDDDVAKSHIRHLIGGHAHVENEQLLQVTFPERPGALLTFLEKLGDDFNITLFHYRNHGAAEGRVLV GLQASEGNSRQLQDALLDIGYDCTMLNDNVGYQLFLK
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia. Deaminates L-threonine, but also L-serine to a lesser extent [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=310, Percent_Identity=31.6129032258064, Blast_Score=129, Evalue=5e-30, Organism=Homo sapiens, GI33469958, Length=321, Percent_Identity=29.9065420560748, Blast_Score=92, Evalue=8e-19, Organism=Homo sapiens, GI19923959, Length=325, Percent_Identity=30.4615384615385, Blast_Score=92, Evalue=1e-18, Organism=Escherichia coli, GI1790207, Length=516, Percent_Identity=50, Blast_Score=479, Evalue=1e-136, Organism=Escherichia coli, GI1789505, Length=307, Percent_Identity=35.5048859934853, Blast_Score=162, Evalue=4e-41, Organism=Caenorhabditis elegans, GI71991565, Length=308, Percent_Identity=32.4675324675325, Blast_Score=141, Evalue=7e-34, Organism=Caenorhabditis elegans, GI17508781, Length=285, Percent_Identity=30.8771929824561, Blast_Score=133, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17537387, Length=332, Percent_Identity=28.9156626506024, Blast_Score=106, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6320930, Length=522, Percent_Identity=47.8927203065134, Blast_Score=445, Evalue=1e-125, Organism=Saccharomyces cerevisiae, GI6322631, Length=326, Percent_Identity=33.4355828220859, Blast_Score=146, Evalue=8e-36, Organism=Saccharomyces cerevisiae, GI6319788, Length=269, Percent_Identity=24.5353159851301, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI21355833, Length=334, Percent_Identity=30.8383233532934, Blast_Score=129, Evalue=5e-30, Organism=Drosophila melanogaster, GI24645328, Length=260, Percent_Identity=28.4615384615385, Blast_Score=82, Evalue=7e-16,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 56729; Mature: 56729
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSHWVRAILQATVYDVAIQTPLEAAPKLTQRFTNDIRFKREDLQPVKSFKLRGAYNRIS CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHH QLNDEQKARGVICASAGNHAQGVAYSARKLALNNIIVMPTTTPDIKVDAVRALGGNVDLY HCCCHHHHCEEEEECCCCCCCCHHHHHHHEEECCEEEEECCCCCCEEEEHHHCCCCEEEC GDSFDEANRYAIDRAEREGLTFIPPYDDELVIAGQGTIGLELTQQWRNMDYVFVAVGGGG CCCCCCCCHHHHHHHHHCCCEEECCCCCCEEEECCCCEEHHHHHHHCCCCEEEEEECCCH LISGVAAFLGEVAPHVKVIAVEADQSASLKAALEANERVKLEQVGLFVDGVAVAQIGELP HHHHHHHHHHHCCCCEEEEEEECCCCCCCCEECCCCCCEEHHHHCEEECCHHHHHHCCCC FDIVRMQKSDKSGPVVDPEVVTCTNDEVCAAVKDIFEENRSIVEPAGALPVAGMKKYIEA HHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHH HNLQGKNCVAIICGANMNFDRLRYIAERTEIGEKKEAIFGVTIPEQTGAFLNFCRSLHGR HCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCC NITEFNYRADSKKSPDSMEPAAIFVGIALKEGDKERQTIRTQLVADGYTAHDLTDDDVAK CCEEECCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHH SHIRHLIGGHAHVENEQLLQVTFPERPGALLTFLEKLGDDFNITLFHYRNHGAAEGRVLV HHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEE GLQASEGNSRQLQDALLDIGYDCTMLNDNVGYQLFLK EEECCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEC >Mature Secondary Structure MLSHWVRAILQATVYDVAIQTPLEAAPKLTQRFTNDIRFKREDLQPVKSFKLRGAYNRIS CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHH QLNDEQKARGVICASAGNHAQGVAYSARKLALNNIIVMPTTTPDIKVDAVRALGGNVDLY HCCCHHHHCEEEEECCCCCCCCHHHHHHHEEECCEEEEECCCCCCEEEEHHHCCCCEEEC GDSFDEANRYAIDRAEREGLTFIPPYDDELVIAGQGTIGLELTQQWRNMDYVFVAVGGGG CCCCCCCCHHHHHHHHHCCCEEECCCCCCEEEECCCCEEHHHHHHHCCCCEEEEEECCCH LISGVAAFLGEVAPHVKVIAVEADQSASLKAALEANERVKLEQVGLFVDGVAVAQIGELP HHHHHHHHHHHCCCCEEEEEEECCCCCCCCEECCCCCCEEHHHHCEEECCHHHHHHCCCC FDIVRMQKSDKSGPVVDPEVVTCTNDEVCAAVKDIFEENRSIVEPAGALPVAGMKKYIEA HHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHH HNLQGKNCVAIICGANMNFDRLRYIAERTEIGEKKEAIFGVTIPEQTGAFLNFCRSLHGR HCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCC NITEFNYRADSKKSPDSMEPAAIFVGIALKEGDKERQTIRTQLVADGYTAHDLTDDDVAK CCEEECCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHH SHIRHLIGGHAHVENEQLLQVTFPERPGALLTFLEKLGDDFNITLFHYRNHGAAEGRVLV HHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEE GLQASEGNSRQLQDALLDIGYDCTMLNDNVGYQLFLK EEECCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3315862; 3550695; 1379743; 9278503; 3003115; 2473940; 9562556 [H]