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The map label for this gene is mmgC [H]

Identifier: 93006278

GI number: 93006278

Start: 1788203

End: 1789996

Strand: Direct

Name: mmgC [H]

Synonym: Pcryo_1452

Alternate gene names: 93006278

Gene position: 1788203-1789996 (Clockwise)

Preceding gene: 93006277

Following gene: 93006279

Centisome position: 58.44

GC content: 45.54

Gene sequence:

>1794_bases
ATGCAATACAAAGCACCCTTACGTGATATCCAATTCGTGATGCATGAGTTACTTGACAGCGAAAGCCATTATAAAACCTT
ACCAGCATTCCAAGAAGCAGATCGTGAGCTAATGGACAGTCTGTTTGAGATGGCCGCAAGCTTTGCTGAAAATGAGCTAT
CACCATTGAATCAAAGTGGTGACGCTGAAGGCTGCCAATTTAACAATGGTCAAGTTACCACGCCAAAAGGCTTTAAAGAA
GCATACAAAGCGTATTGTGAGCTTGGCTTCCCAGCCCTATCTGCTGAAGAAGACTTCGGCGGTCAAAACATGCCGTTTTC
ATTATCGACAGTCATTAATGAAATGGTTGGTACGGCTAACTGGTCATTCTCTATGTACCCTGGTTTATCTCATGGTGCCA
TTCAAACCATCGAGCATCACGGTACAGACGAGCAAAAACAAACCTACCTAGAAAAAATGGTCAGCGGCGAATGGTCAGGC
ACCATGTGCTTGACTGAAGCACATGCAGGTTCTGATTTGGGTATTATCCGAACCAAAGCCGAGCCTAAAGAAGATGGTAG
CTATAGCATCACTGGTCAAAAAATCTTTATTTCAGCTGGTGAGCATGACTTAACGGATAATATCATTCACATTGTATTGG
CTCGTCTACCAGGTGCGCCTGCTGGTACAAAAGGCATCTCACTGTTTATCGTTCCTAAGGTAACGGTCAACGAAGATGGC
AGCCTAGGTGAAAACAATAACGTCGTTTGTGGCTCTATCGAACACAAAATGGGCATCAAAGCCTCAGCCACGTGCGTGAT
GAATTTTGATGGCGCAACAGGTTATCTGATTGGCCCAGAAAACCGTGGTCTACAGTGCATGTTTACCTTTATGAACGTGG
CGCGTATTGGTACCGCAGTGCAAGGTTTAACAGCAGCAGAATATGCATTCCAAGGCTCATTGACTTATGCCAAAGATCGT
CTAGCGATGCGTTCATTATCTGGTGTTAAAGCCCCTGAAAAAGTCGCTGACCCTATCATTGTACATCCAGCGGTTCGTAA
CATGCTGTTGACTGAAAAAGCCTTTGCTGAAGGTGGCCGTGCTTTAGTCTATTACCTCTCACATTTTGCCGATACTGTCG
CAAAAGGCGAAGGCGATGCGCTTAAATTTGCTGACCAAATGCTGTCATTATTGACGCCTATTGCTAAAGCGTTCTTGACA
GAAACTGGTCTAGAAGCAGCCAACCATGGCGTACAGGTTTATGGTGGTCACGGCTTTATCAGTGAATGGGGTATGGAGCA
AAACGTCCGTGATACGCGTATTGCATGTCTTTACGAAGGTACTACTGAAATCCAAGCGCTTGATCTATTAGGTCGTAAAG
TATTGGGCTCACAAGGCAAGCTGCTAGCAAACTTCGTCAAAATCATCCAGACATTCTGTGAAGAAAACAAAGAAAACGAC
GAGATGGGTCAATTCATTCGCCCACTTGCCAAACATCTTAAAGAATGGGGTGATTTGACTGCACGCATCGGCATGCAAGC
GACTGAAAACCCAGATGCGGTTGGCGGCGCGGCGGTCGATTATATGTATTTCAGCGGTTATGTGACGCTAGCCTATTTAT
GGGCACGCATGGCATTAGTGGCACAAACTGAACTTGCTAACGGTAGTAGCGAACAAGCCTTCTACGACGCGAAAGTAAAA
ACCGCACAGTTCTACTTTGCCAAACTGTTGCCACGTACCACCACTCACGTACAGCGTATCAGCACTGGTGTTGAGCCGTA
TATGAGCATGGATGTTGATCAATTTGCGTTTTAA

Upstream 100 bases:

>100_bases
ATAATGCAGACACACTCCATGCCAGCAAGATACTAGCAACTCAGACTTACAACAGTCATCCCATCGCTGTCGGTCATATA
CCAAAAAAGGACAGGAAGTT

Downstream 100 bases:

>100_bases
TTAACACCAAAAAATATTGATTGATCATTTTTTTGTAGCGCTAAATAATGTATTTTCTATCGGCAACATACTAAGGTGTG
TTGCCGATTTTATTTACTAT

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 597; Mature: 597

Protein sequence:

>597_residues
MQYKAPLRDIQFVMHELLDSESHYKTLPAFQEADRELMDSLFEMAASFAENELSPLNQSGDAEGCQFNNGQVTTPKGFKE
AYKAYCELGFPALSAEEDFGGQNMPFSLSTVINEMVGTANWSFSMYPGLSHGAIQTIEHHGTDEQKQTYLEKMVSGEWSG
TMCLTEAHAGSDLGIIRTKAEPKEDGSYSITGQKIFISAGEHDLTDNIIHIVLARLPGAPAGTKGISLFIVPKVTVNEDG
SLGENNNVVCGSIEHKMGIKASATCVMNFDGATGYLIGPENRGLQCMFTFMNVARIGTAVQGLTAAEYAFQGSLTYAKDR
LAMRSLSGVKAPEKVADPIIVHPAVRNMLLTEKAFAEGGRALVYYLSHFADTVAKGEGDALKFADQMLSLLTPIAKAFLT
ETGLEAANHGVQVYGGHGFISEWGMEQNVRDTRIACLYEGTTEIQALDLLGRKVLGSQGKLLANFVKIIQTFCEENKEND
EMGQFIRPLAKHLKEWGDLTARIGMQATENPDAVGGAAVDYMYFSGYVTLAYLWARMALVAQTELANGSSEQAFYDAKVK
TAQFYFAKLLPRTTTHVQRISTGVEPYMSMDVDQFAF

Sequences:

>Translated_597_residues
MQYKAPLRDIQFVMHELLDSESHYKTLPAFQEADRELMDSLFEMAASFAENELSPLNQSGDAEGCQFNNGQVTTPKGFKE
AYKAYCELGFPALSAEEDFGGQNMPFSLSTVINEMVGTANWSFSMYPGLSHGAIQTIEHHGTDEQKQTYLEKMVSGEWSG
TMCLTEAHAGSDLGIIRTKAEPKEDGSYSITGQKIFISAGEHDLTDNIIHIVLARLPGAPAGTKGISLFIVPKVTVNEDG
SLGENNNVVCGSIEHKMGIKASATCVMNFDGATGYLIGPENRGLQCMFTFMNVARIGTAVQGLTAAEYAFQGSLTYAKDR
LAMRSLSGVKAPEKVADPIIVHPAVRNMLLTEKAFAEGGRALVYYLSHFADTVAKGEGDALKFADQMLSLLTPIAKAFLT
ETGLEAANHGVQVYGGHGFISEWGMEQNVRDTRIACLYEGTTEIQALDLLGRKVLGSQGKLLANFVKIIQTFCEENKEND
EMGQFIRPLAKHLKEWGDLTARIGMQATENPDAVGGAAVDYMYFSGYVTLAYLWARMALVAQTELANGSSEQAFYDAKVK
TAQFYFAKLLPRTTTHVQRISTGVEPYMSMDVDQFAF
>Mature_597_residues
MQYKAPLRDIQFVMHELLDSESHYKTLPAFQEADRELMDSLFEMAASFAENELSPLNQSGDAEGCQFNNGQVTTPKGFKE
AYKAYCELGFPALSAEEDFGGQNMPFSLSTVINEMVGTANWSFSMYPGLSHGAIQTIEHHGTDEQKQTYLEKMVSGEWSG
TMCLTEAHAGSDLGIIRTKAEPKEDGSYSITGQKIFISAGEHDLTDNIIHIVLARLPGAPAGTKGISLFIVPKVTVNEDG
SLGENNNVVCGSIEHKMGIKASATCVMNFDGATGYLIGPENRGLQCMFTFMNVARIGTAVQGLTAAEYAFQGSLTYAKDR
LAMRSLSGVKAPEKVADPIIVHPAVRNMLLTEKAFAEGGRALVYYLSHFADTVAKGEGDALKFADQMLSLLTPIAKAFLT
ETGLEAANHGVQVYGGHGFISEWGMEQNVRDTRIACLYEGTTEIQALDLLGRKVLGSQGKLLANFVKIIQTFCEENKEND
EMGQFIRPLAKHLKEWGDLTARIGMQATENPDAVGGAAVDYMYFSGYVTLAYLWARMALVAQTELANGSSEQAFYDAKVK
TAQFYFAKLLPRTTTHVQRISTGVEPYMSMDVDQFAF

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=429, Percent_Identity=24.7086247086247, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI76496475, Length=377, Percent_Identity=29.1777188328912, Blast_Score=106, Evalue=7e-23,
Organism=Homo sapiens, GI4557235, Length=375, Percent_Identity=29.0666666666667, Blast_Score=106, Evalue=8e-23,
Organism=Homo sapiens, GI4501857, Length=385, Percent_Identity=26.7532467532467, Blast_Score=105, Evalue=9e-23,
Organism=Homo sapiens, GI7656849, Length=373, Percent_Identity=27.6139410187668, Blast_Score=103, Evalue=6e-22,
Organism=Homo sapiens, GI4557233, Length=416, Percent_Identity=26.2019230769231, Blast_Score=102, Evalue=9e-22,
Organism=Homo sapiens, GI226958412, Length=448, Percent_Identity=24.7767857142857, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI226958414, Length=384, Percent_Identity=25, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI21361497, Length=376, Percent_Identity=24.468085106383, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI187960098, Length=426, Percent_Identity=26.9953051643192, Blast_Score=86, Evalue=8e-17,
Organism=Homo sapiens, GI4557231, Length=426, Percent_Identity=26.9953051643192, Blast_Score=86, Evalue=9e-17,
Organism=Escherichia coli, GI87082384, Length=334, Percent_Identity=26.3473053892216, Blast_Score=111, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17508101, Length=411, Percent_Identity=27.007299270073, Blast_Score=115, Evalue=8e-26,
Organism=Caenorhabditis elegans, GI17569725, Length=338, Percent_Identity=29.8816568047337, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17533517, Length=431, Percent_Identity=26.9141531322506, Blast_Score=105, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI71985184, Length=377, Percent_Identity=28.3819628647215, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17534899, Length=397, Percent_Identity=27.455919395466, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI86563383, Length=365, Percent_Identity=24.9315068493151, Blast_Score=96, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI86563381, Length=365, Percent_Identity=24.9315068493151, Blast_Score=96, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17506239, Length=365, Percent_Identity=25.4794520547945, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17538396, Length=417, Percent_Identity=23.7410071942446, Blast_Score=93, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17551932, Length=369, Percent_Identity=23.5772357723577, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17505929, Length=371, Percent_Identity=23.7196765498652, Blast_Score=83, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17570075, Length=319, Percent_Identity=26.3322884012539, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71990804, Length=283, Percent_Identity=26.8551236749117, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71985192, Length=249, Percent_Identity=30.1204819277108, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI32563615, Length=234, Percent_Identity=27.3504273504274, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24666513, Length=451, Percent_Identity=25.4988913525499, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI21355753, Length=438, Percent_Identity=26.4840182648402, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI21356377, Length=439, Percent_Identity=25.5125284738041, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24646207, Length=439, Percent_Identity=24.6013667425968, Blast_Score=99, Evalue=7e-21,
Organism=Drosophila melanogaster, GI24660351, Length=314, Percent_Identity=30.2547770700637, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI281363737, Length=391, Percent_Identity=25.8312020460358, Blast_Score=87, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 65249; Mature: 65249

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYKAPLRDIQFVMHELLDSESHYKTLPAFQEADRELMDSLFEMAASFAENELSPLNQSG
CCCCCHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DAEGCQFNNGQVTTPKGFKEAYKAYCELGFPALSAEEDFGGQNMPFSLSTVINEMVGTAN
CCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCC
WSFSMYPGLSHGAIQTIEHHGTDEQKQTYLEKMVSGEWSGTMCLTEAHAGSDLGIIRTKA
CCEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECC
EPKEDGSYSITGQKIFISAGEHDLTDNIIHIVLARLPGAPAGTKGISLFIVPKVTVNEDG
CCCCCCCEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCC
SLGENNNVVCGSIEHKMGIKASATCVMNFDGATGYLIGPENRGLQCMFTFMNVARIGTAV
CCCCCCCEEEEEHHHHCCCCEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHH
QGLTAAEYAFQGSLTYAKDRLAMRSLSGVKAPEKVADPIIVHPAVRNMLLTEKAFAEGGR
HCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHCCCEEECHHHHHHHHHHHHHHCCCH
ALVYYLSHFADTVAKGEGDALKFADQMLSLLTPIAKAFLTETGLEAANHGVQVYGGHGFI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCEEEEECCCCH
SEWGMEQNVRDTRIACLYEGTTEIQALDLLGRKVLGSQGKLLANFVKIIQTFCEENKEND
HHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCH
EMGQFIRPLAKHLKEWGDLTARIGMQATENPDAVGGAAVDYMYFSGYVTLAYLWARMALV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AQTELANGSSEQAFYDAKVKTAQFYFAKLLPRTTTHVQRISTGVEPYMSMDVDQFAF
HHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCHHHHCC
>Mature Secondary Structure
MQYKAPLRDIQFVMHELLDSESHYKTLPAFQEADRELMDSLFEMAASFAENELSPLNQSG
CCCCCHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DAEGCQFNNGQVTTPKGFKEAYKAYCELGFPALSAEEDFGGQNMPFSLSTVINEMVGTAN
CCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCC
WSFSMYPGLSHGAIQTIEHHGTDEQKQTYLEKMVSGEWSGTMCLTEAHAGSDLGIIRTKA
CCEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECC
EPKEDGSYSITGQKIFISAGEHDLTDNIIHIVLARLPGAPAGTKGISLFIVPKVTVNEDG
CCCCCCCEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCC
SLGENNNVVCGSIEHKMGIKASATCVMNFDGATGYLIGPENRGLQCMFTFMNVARIGTAV
CCCCCCCEEEEEHHHHCCCCEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHH
QGLTAAEYAFQGSLTYAKDRLAMRSLSGVKAPEKVADPIIVHPAVRNMLLTEKAFAEGGR
HCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHCCCEEECHHHHHHHHHHHHHHCCCH
ALVYYLSHFADTVAKGEGDALKFADQMLSLLTPIAKAFLTETGLEAANHGVQVYGGHGFI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCEEEEECCCCH
SEWGMEQNVRDTRIACLYEGTTEIQALDLLGRKVLGSQGKLLANFVKIIQTFCEENKEND
HHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCH
EMGQFIRPLAKHLKEWGDLTARIGMQATENPDAVGGAAVDYMYFSGYVTLAYLWARMALV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AQTELANGSSEQAFYDAKVKTAQFYFAKLLPRTTTHVQRISTGVEPYMSMDVDQFAF
HHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]