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The map label for this gene is mmgC [H]

Identifier: 93006279

GI number: 93006279

Start: 1790289

End: 1792073

Strand: Direct

Name: mmgC [H]

Synonym: Pcryo_1453

Alternate gene names: 93006279

Gene position: 1790289-1792073 (Clockwise)

Preceding gene: 93006278

Following gene: 93006280

Centisome position: 58.51

GC content: 44.87

Gene sequence:

>1785_bases
ATGGCTGTTTATAATGCCCCTCTTAATGACATGCGCTTTATCTTAAATGATGTGTTTAACGCGCCTAAATTTTGGCAAAA
TAACGAGAATCTTGCTCATGTCGATATGGAAACGGTCGATATGATTTTGGAAGAAATGGCAAAACTGACAAAAAACGTTT
TGTTACCTATCAACCGTAGCGGTGATGAAGAAGGCGCAACCTTCCAAGGTGATGGCGTCGTTACGACTCCAACTGGCTTT
AAAGAAGCTTATAAGCAGTATGCTGAATCTGGCTGGGTTGGCTTAAGTGGTAATTCTGAATACGGTGGTCAAGGTTTCCC
AAAAATGGTGACTATGCTGACTGAAGAGATGGTATTCACTGCCAACCAATCATTCGCTCTCTACCCTAACCTGACCGTTG
GTGCAACATTGTGCCTAAACGCGGCTGCCTCTGAAGAGCAAAAGCAAACTTACTTAGAGAAAATGTACAACGGCGAATGG
GCTGGCACCATGTGCTTGACAGAGCCACATGCTGGTACTGACTTGGGTATCATCAAAACCAAAGCTATTCCTAATGATGA
CGGTAGCTATGATATCTCTGGTACCAAAATCTTTATCACTGGCGGTGAGCATGACCTAACTGACAATATCATTCATCTGG
TACTGGCAAAAACACCGAATGCACCAGAAGGCTCAAAAGGTATTTCACTATTTGTCGTACCGAAATTCTTGGTCAATGAA
GATGGCAGCTTAGGCGAGCGCAACACCTTAGCAGTCGGCTCTATCGAGCATAAAATGGGTATCAAAGCCTCTGCCACTTG
TGTGATGAACTTTGATAGCGCCAAAGGCTGGATGGTTGGTGCAGAAAACACGGGTCTGTCATCAATGTTCATTATGATGA
ACTATGAGCGTGTCACCATGGGTCTACAAGGGCTTGGTGGTTCTGAGCTTGCTTATCAAAATGCGGCGTTATATGCCAAT
GACCGTGGTCAAGGTCGTAGCGATACCCAACTGCAAAGCCCAGAAAAACCAGCAGATGCCATCATTCATCATGCCGATGT
ACGCCGTATGCTATTGAATGCCAAAGCCAACACTGAAGCGTCACGCTGCTTTGCGATGTACGTTGCCAAAAACCTTGATG
AAGAGAAATTTAGTACCGATCCAGAGGCCGCTCAAGCTGCTGCCGCACGTGTTGCTCTATTGACGCCAGTGGCTAAAGCA
TTCTTGACTGACAAAGCACTAGAAGCCACTATTGATTGCCAGCAAGTATTTGGCGGTCATGGCTATATACGTGAATGGGG
TATGGAGCAAATCGTTCGTGATACGCGTATCGCCCAGATCTATGAAGGTACCAATGGTATTCAAGCGCTTGATTTACTAG
GTCGTAAAGTGGCGAAAAATAACGGCAAATACGTTACCCATTTCTTAGGTGAAATTCGTGATTTTGTCAATAATATGCAA
GCAGAGCACGGTATCAAGCAAGCGACGCTAGATGCTGCTGATACAATTGAAGCACTAACCACAACGGTGCTCAATAATAT
TGGTGAGCGTAAGAATGAAATTAACGGCTGTGCGGTTGATTATATGCATGCCTTTGGTTACCTAGCCTACTCGTATATGT
TTGCGTTGATGGTTGAGGCGGCCAATGGCAAAGAAGGTGAGTTTTACACCAATAAAGCCAAGCTTGCTGATTATTTCGTT
GGTCGTATCTTGCCACGTATCGATGCCCATGCTCAGATGGTTGAAGCTGGTAGTGATCCGATGATGAACTTTGACCTGAA
TTACTTTGACGTACCTGCTAGCTAA

Upstream 100 bases:

>100_bases
TAATTTGCTAAACTTTAATAATGAATATTAATCCCAACTCAAAAGATCTCTTATAAATTTGTTCAACTCACTGTTATTTA
TTTGAACCAAAGGAATGTTT

Downstream 100 bases:

>100_bases
TTGGTTACTTTTATAATAAAGTAAGCCCTGCCGCACTATGATTAAGGGGACAGTCACGCTACTGTCCCTTTTTTTGCCAA
AAATATCTTCATAAAATTGA

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 594; Mature: 593

Protein sequence:

>594_residues
MAVYNAPLNDMRFILNDVFNAPKFWQNNENLAHVDMETVDMILEEMAKLTKNVLLPINRSGDEEGATFQGDGVVTTPTGF
KEAYKQYAESGWVGLSGNSEYGGQGFPKMVTMLTEEMVFTANQSFALYPNLTVGATLCLNAAASEEQKQTYLEKMYNGEW
AGTMCLTEPHAGTDLGIIKTKAIPNDDGSYDISGTKIFITGGEHDLTDNIIHLVLAKTPNAPEGSKGISLFVVPKFLVNE
DGSLGERNTLAVGSIEHKMGIKASATCVMNFDSAKGWMVGAENTGLSSMFIMMNYERVTMGLQGLGGSELAYQNAALYAN
DRGQGRSDTQLQSPEKPADAIIHHADVRRMLLNAKANTEASRCFAMYVAKNLDEEKFSTDPEAAQAAAARVALLTPVAKA
FLTDKALEATIDCQQVFGGHGYIREWGMEQIVRDTRIAQIYEGTNGIQALDLLGRKVAKNNGKYVTHFLGEIRDFVNNMQ
AEHGIKQATLDAADTIEALTTTVLNNIGERKNEINGCAVDYMHAFGYLAYSYMFALMVEAANGKEGEFYTNKAKLADYFV
GRILPRIDAHAQMVEAGSDPMMNFDLNYFDVPAS

Sequences:

>Translated_594_residues
MAVYNAPLNDMRFILNDVFNAPKFWQNNENLAHVDMETVDMILEEMAKLTKNVLLPINRSGDEEGATFQGDGVVTTPTGF
KEAYKQYAESGWVGLSGNSEYGGQGFPKMVTMLTEEMVFTANQSFALYPNLTVGATLCLNAAASEEQKQTYLEKMYNGEW
AGTMCLTEPHAGTDLGIIKTKAIPNDDGSYDISGTKIFITGGEHDLTDNIIHLVLAKTPNAPEGSKGISLFVVPKFLVNE
DGSLGERNTLAVGSIEHKMGIKASATCVMNFDSAKGWMVGAENTGLSSMFIMMNYERVTMGLQGLGGSELAYQNAALYAN
DRGQGRSDTQLQSPEKPADAIIHHADVRRMLLNAKANTEASRCFAMYVAKNLDEEKFSTDPEAAQAAAARVALLTPVAKA
FLTDKALEATIDCQQVFGGHGYIREWGMEQIVRDTRIAQIYEGTNGIQALDLLGRKVAKNNGKYVTHFLGEIRDFVNNMQ
AEHGIKQATLDAADTIEALTTTVLNNIGERKNEINGCAVDYMHAFGYLAYSYMFALMVEAANGKEGEFYTNKAKLADYFV
GRILPRIDAHAQMVEAGSDPMMNFDLNYFDVPAS
>Mature_593_residues
AVYNAPLNDMRFILNDVFNAPKFWQNNENLAHVDMETVDMILEEMAKLTKNVLLPINRSGDEEGATFQGDGVVTTPTGFK
EAYKQYAESGWVGLSGNSEYGGQGFPKMVTMLTEEMVFTANQSFALYPNLTVGATLCLNAAASEEQKQTYLEKMYNGEWA
GTMCLTEPHAGTDLGIIKTKAIPNDDGSYDISGTKIFITGGEHDLTDNIIHLVLAKTPNAPEGSKGISLFVVPKFLVNED
GSLGERNTLAVGSIEHKMGIKASATCVMNFDSAKGWMVGAENTGLSSMFIMMNYERVTMGLQGLGGSELAYQNAALYAND
RGQGRSDTQLQSPEKPADAIIHHADVRRMLLNAKANTEASRCFAMYVAKNLDEEKFSTDPEAAQAAAARVALLTPVAKAF
LTDKALEATIDCQQVFGGHGYIREWGMEQIVRDTRIAQIYEGTNGIQALDLLGRKVAKNNGKYVTHFLGEIRDFVNNMQA
EHGIKQATLDAADTIEALTTTVLNNIGERKNEINGCAVDYMHAFGYLAYSYMFALMVEAANGKEGEFYTNKAKLADYFVG
RILPRIDAHAQMVEAGSDPMMNFDLNYFDVPAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557235, Length=432, Percent_Identity=29.3981481481481, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI76496475, Length=432, Percent_Identity=29.1666666666667, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI21361497, Length=456, Percent_Identity=26.7543859649123, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI4501859, Length=368, Percent_Identity=27.445652173913, Blast_Score=105, Evalue=9e-23,
Organism=Homo sapiens, GI4501857, Length=384, Percent_Identity=26.0416666666667, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI226958412, Length=383, Percent_Identity=26.8929503916449, Blast_Score=104, Evalue=3e-22,
Organism=Homo sapiens, GI226958414, Length=382, Percent_Identity=26.9633507853403, Blast_Score=103, Evalue=5e-22,
Organism=Homo sapiens, GI7656849, Length=380, Percent_Identity=25.2631578947368, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI4557233, Length=449, Percent_Identity=26.0579064587973, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI4557231, Length=319, Percent_Identity=27.8996865203762, Blast_Score=87, Evalue=4e-17,
Organism=Homo sapiens, GI187960098, Length=319, Percent_Identity=27.8996865203762, Blast_Score=87, Evalue=5e-17,
Organism=Escherichia coli, GI87082384, Length=301, Percent_Identity=27.2425249169435, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI87081958, Length=324, Percent_Identity=26.8518518518519, Blast_Score=76, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17508101, Length=412, Percent_Identity=28.1553398058252, Blast_Score=120, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17534899, Length=435, Percent_Identity=27.5862068965517, Blast_Score=118, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17569725, Length=424, Percent_Identity=27.3584905660377, Blast_Score=112, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17538396, Length=387, Percent_Identity=26.6149870801034, Blast_Score=108, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17506239, Length=407, Percent_Identity=26.5356265356265, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17533517, Length=384, Percent_Identity=26.3020833333333, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI86563381, Length=396, Percent_Identity=25.2525252525253, Blast_Score=96, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI86563383, Length=396, Percent_Identity=25.2525252525253, Blast_Score=96, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17570075, Length=381, Percent_Identity=27.0341207349081, Blast_Score=89, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI71985184, Length=390, Percent_Identity=25.6410256410256, Blast_Score=88, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71990804, Length=303, Percent_Identity=26.4026402640264, Blast_Score=77, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI32563615, Length=238, Percent_Identity=27.7310924369748, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17551932, Length=338, Percent_Identity=24.5562130177515, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24666513, Length=427, Percent_Identity=26.9320843091335, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI281363737, Length=475, Percent_Identity=26.3157894736842, Blast_Score=102, Evalue=1e-21,
Organism=Drosophila melanogaster, GI21356377, Length=384, Percent_Identity=27.0833333333333, Blast_Score=101, Evalue=2e-21,
Organism=Drosophila melanogaster, GI21355753, Length=381, Percent_Identity=25.7217847769029, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24660351, Length=423, Percent_Identity=26.4775413711584, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24646207, Length=389, Percent_Identity=24.4215938303342, Blast_Score=90, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 64993; Mature: 64862

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVYNAPLNDMRFILNDVFNAPKFWQNNENLAHVDMETVDMILEEMAKLTKNVLLPINRS
CCEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHEEEEECCC
GDEEGATFQGDGVVTTPTGFKEAYKQYAESGWVGLSGNSEYGGQGFPKMVTMLTEEMVFT
CCCCCCEEECCCEEECCCCHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHEE
ANQSFALYPNLTVGATLCLNAAASEEQKQTYLEKMYNGEWAGTMCLTEPHAGTDLGIIKT
CCCCEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEE
KAIPNDDGSYDISGTKIFITGGEHDLTDNIIHLVLAKTPNAPEGSKGISLFVVPKFLVNE
CCCCCCCCCEEECCCEEEEECCCCCHHHHEEEEEEECCCCCCCCCCCEEEEEECHHEECC
DGSLGERNTLAVGSIEHKMGIKASATCVMNFDSAKGWMVGAENTGLSSMFIMMNYERVTM
CCCCCCCCEEEEECHHHHCCCCEEEEEEEEECCCCCEEEECCCCCCCEEEEEEEHHHHHH
GLQGLGGSELAYQNAALYANDRGQGRSDTQLQSPEKPADAIIHHADVRRMLLNAKANTEA
HHCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH
SRCFAMYVAKNLDEEKFSTDPEAAQAAAARVALLTPVAKAFLTDKALEATIDCQQVFGGH
HHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GYIREWGMEQIVRDTRIAQIYEGTNGIQALDLLGRKVAKNNGKYVTHFLGEIRDFVNNMQ
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AEHGIKQATLDAADTIEALTTTVLNNIGERKNEINGCAVDYMHAFGYLAYSYMFALMVEA
HHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ANGKEGEFYTNKAKLADYFVGRILPRIDAHAQMVEAGSDPMMNFDLNYFDVPAS
CCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEECCCC
>Mature Secondary Structure 
AVYNAPLNDMRFILNDVFNAPKFWQNNENLAHVDMETVDMILEEMAKLTKNVLLPINRS
CEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHEEEEECCC
GDEEGATFQGDGVVTTPTGFKEAYKQYAESGWVGLSGNSEYGGQGFPKMVTMLTEEMVFT
CCCCCCEEECCCEEECCCCHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHEE
ANQSFALYPNLTVGATLCLNAAASEEQKQTYLEKMYNGEWAGTMCLTEPHAGTDLGIIKT
CCCCEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEE
KAIPNDDGSYDISGTKIFITGGEHDLTDNIIHLVLAKTPNAPEGSKGISLFVVPKFLVNE
CCCCCCCCCEEECCCEEEEECCCCCHHHHEEEEEEECCCCCCCCCCCEEEEEECHHEECC
DGSLGERNTLAVGSIEHKMGIKASATCVMNFDSAKGWMVGAENTGLSSMFIMMNYERVTM
CCCCCCCCEEEEECHHHHCCCCEEEEEEEEECCCCCEEEECCCCCCCEEEEEEEHHHHHH
GLQGLGGSELAYQNAALYANDRGQGRSDTQLQSPEKPADAIIHHADVRRMLLNAKANTEA
HHCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHH
SRCFAMYVAKNLDEEKFSTDPEAAQAAAARVALLTPVAKAFLTDKALEATIDCQQVFGGH
HHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GYIREWGMEQIVRDTRIAQIYEGTNGIQALDLLGRKVAKNNGKYVTHFLGEIRDFVNNMQ
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AEHGIKQATLDAADTIEALTTTVLNNIGERKNEINGCAVDYMHAFGYLAYSYMFALMVEA
HHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ANGKEGEFYTNKAKLADYFVGRILPRIDAHAQMVEAGSDPMMNFDLNYFDVPAS
CCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]