Click here to switch to the map view.

The map label for this gene is 93006186

Identifier: 93006186

GI number: 93006186

Start: 1663125

End: 1664486

Strand: Direct

Name: 93006186

Synonym: Pcryo_1360

Alternate gene names: NA

Gene position: 1663125-1664486 (Clockwise)

Preceding gene: 93006185

Following gene: 93006187

Centisome position: 54.35

GC content: 38.18

Gene sequence:

>1362_bases
ATGGCGAGTGATTGGGTAAAAACAACTCTTGGAGAAATAGTAAAGCTGGGCAATGGAATAATTCAGACAGGACCATTTGG
TAGCCAATTGCATGCCTCTGATTATGTTGATGAGGGGATTCCAGTAATTATGCCTCTTAATATTATCAATAATAAAATAG
ATTTATCTGGTATAGCTAGAATAACTAAAGAAGATGCAGAAAGACTATCAAAGCATTTAGTGAAAAAGAACGATATCGTA
TACAGTCGCCGAGGTGACGTAACTAGAAAAGCGTTGATTACTGAACTTGAAGAAGGGATGTTTTGTGGTACTGGATGCTT
ACTTGTAAGACCTGGTAATAGCATAGATGCTCGTTTCTTGACCTATCACTTAAGTTCGCCTATAAATCAAGAATGGATAA
TCAGACACGCTGTTGGCGCTACTATGCCTAATCTTAATACAGGAATACTCAAGCGCGTTCCTTTGAACATACCAAGTTTG
GATACTCAAAAAGCAATTGCCCATATTCTTGGTTCTTTAGACGACAAAATCGAGCTAAACCGCCAAATGAATGAAACGCT
AGAAGCGATGGCACAGGCATTGTTTAAAAGTTGGTTTGTTGATTTTGATCCGTTGATTGATAATGCGCTGGCGGCTGGTA
ATGCTATTCCTGATGAATTTATCGAACGTGCTGAACAGCGTAAGAAGATTGAGAAAAAAGACAATTCAGATATTCAGGAC
TTATTCCCTGATGCGTTTGAGTTTGCGGAAGAAATGGGTTGGATTCCGAAGGGGTGGGAAAATGGAATACTTGCTGATAT
TTGCTCGTACGGAAAAGGCAAAATAAATACATCAGAACTCACTTTAGAAAACTATGTTTCTACTGAAAATATGAATAAAG
AGAAGTCAGGAATTTCTCATGCAGCGAATATCGCGAGTACCAATCAAGTTCCAAAGTTTTCTGTAGGACAAACCTTAATC
TCTAATATACGTCCATATTTCAAAAAAATATGGCTTGCTAGTTTCAGCGGTGGTCGGTCAAATGATGTCTTGAGCTTTCA
AGCTCATAACTCTGTAGCTAATGAATATTTATTTAATCTTCTTTATCAGGATTCCTTTTTTGACTATATGACTGCAACAT
CAAAAGGAACCAAGATGCCACGCGGTGATAAAGCAGCCATTATGAGCTGGTCAGTAGCAATACCTTCATCAAGATTAATG
GAAGAGTTTTCGGAATTAGCAAAACCAATGTATCTCGCAAATAATCTTCGTTCATTACAGACTATTGAATTAGCCAAACT
CCGCGATACCCTCTTGTCTAAGTTAATGTCAGGGGAGTTGTGTATCCCAGATGCTGCCAGACTTGTGGATGAAATAATAT
AG

Upstream 100 bases:

>100_bases
GAGACTAAGATGCTGGAGCTAAGCCAAACGCTATATGCACAGATGCAAGAGTCCGAAAAGCTAGATGCGACCATTCGTCA
GAACTTGGAGGTATTGGGTT

Downstream 100 bases:

>100_bases
CTTTTGACAGTAAATATTTCTCTCAAAAATATAGTAATTAATGGAGTTTAGCATGAAAAAGCTTTTACTTAGTTTGGCGC
TCAGCCTAAGCGTTCTATCT

Product: restriction modification system DNA specificity subunit

Products: NA

Alternate protein names: S.HindVIIP; Type I restriction enzyme HindVIIP specificity protein; S protein [H]

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MASDWVKTTLGEIVKLGNGIIQTGPFGSQLHASDYVDEGIPVIMPLNIINNKIDLSGIARITKEDAERLSKHLVKKNDIV
YSRRGDVTRKALITELEEGMFCGTGCLLVRPGNSIDARFLTYHLSSPINQEWIIRHAVGATMPNLNTGILKRVPLNIPSL
DTQKAIAHILGSLDDKIELNRQMNETLEAMAQALFKSWFVDFDPLIDNALAAGNAIPDEFIERAEQRKKIEKKDNSDIQD
LFPDAFEFAEEMGWIPKGWENGILADICSYGKGKINTSELTLENYVSTENMNKEKSGISHAANIASTNQVPKFSVGQTLI
SNIRPYFKKIWLASFSGGRSNDVLSFQAHNSVANEYLFNLLYQDSFFDYMTATSKGTKMPRGDKAAIMSWSVAIPSSRLM
EEFSELAKPMYLANNLRSLQTIELAKLRDTLLSKLMSGELCIPDAARLVDEII

Sequences:

>Translated_453_residues
MASDWVKTTLGEIVKLGNGIIQTGPFGSQLHASDYVDEGIPVIMPLNIINNKIDLSGIARITKEDAERLSKHLVKKNDIV
YSRRGDVTRKALITELEEGMFCGTGCLLVRPGNSIDARFLTYHLSSPINQEWIIRHAVGATMPNLNTGILKRVPLNIPSL
DTQKAIAHILGSLDDKIELNRQMNETLEAMAQALFKSWFVDFDPLIDNALAAGNAIPDEFIERAEQRKKIEKKDNSDIQD
LFPDAFEFAEEMGWIPKGWENGILADICSYGKGKINTSELTLENYVSTENMNKEKSGISHAANIASTNQVPKFSVGQTLI
SNIRPYFKKIWLASFSGGRSNDVLSFQAHNSVANEYLFNLLYQDSFFDYMTATSKGTKMPRGDKAAIMSWSVAIPSSRLM
EEFSELAKPMYLANNLRSLQTIELAKLRDTLLSKLMSGELCIPDAARLVDEII
>Mature_452_residues
ASDWVKTTLGEIVKLGNGIIQTGPFGSQLHASDYVDEGIPVIMPLNIINNKIDLSGIARITKEDAERLSKHLVKKNDIVY
SRRGDVTRKALITELEEGMFCGTGCLLVRPGNSIDARFLTYHLSSPINQEWIIRHAVGATMPNLNTGILKRVPLNIPSLD
TQKAIAHILGSLDDKIELNRQMNETLEAMAQALFKSWFVDFDPLIDNALAAGNAIPDEFIERAEQRKKIEKKDNSDIQDL
FPDAFEFAEEMGWIPKGWENGILADICSYGKGKINTSELTLENYVSTENMNKEKSGISHAANIASTNQVPKFSVGQTLIS
NIRPYFKKIWLASFSGGRSNDVLSFQAHNSVANEYLFNLLYQDSFFDYMTATSKGTKMPRGDKAAIMSWSVAIPSSRLME
EFSELAKPMYLANNLRSLQTIELAKLRDTLLSKLMSGELCIPDAARLVDEII

Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. Subunit S dictates DNA sequences specificity [H]

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I restriction system S methylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 50473; Mature: 50342

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASDWVKTTLGEIVKLGNGIIQTGPFGSQLHASDYVDEGIPVIMPLNIINNKIDLSGIAR
CCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHCCCCEEEEHHHHCCCCCHHHHHH
ITKEDAERLSKHLVKKNDIVYSRRGDVTRKALITELEEGMFCGTGCLLVRPGNSIDARFL
HHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCEECCCEEEECCCCCCCHHHE
TYHLSSPINQEWIIRHAVGATMPNLNTGILKRVPLNIPSLDTQKAIAHILGSLDDKIELN
EEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHH
RQMNETLEAMAQALFKSWFVDFDPLIDNALAAGNAIPDEFIERAEQRKKIEKKDNSDIQD
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHH
LFPDAFEFAEEMGWIPKGWENGILADICSYGKGKINTSELTLENYVSTENMNKEKSGISH
HCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
AANIASTNQVPKFSVGQTLISNIRPYFKKIWLASFSGGRSNDVLSFQAHNSVANEYLFNL
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHH
LYQDSFFDYMTATSKGTKMPRGDKAAIMSWSVAIPSSRLMEEFSELAKPMYLANNLRSLQ
HHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
TIELAKLRDTLLSKLMSGELCIPDAARLVDEII
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC
>Mature Secondary Structure 
ASDWVKTTLGEIVKLGNGIIQTGPFGSQLHASDYVDEGIPVIMPLNIINNKIDLSGIAR
CCHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHCCCCEEEEHHHHCCCCCHHHHHH
ITKEDAERLSKHLVKKNDIVYSRRGDVTRKALITELEEGMFCGTGCLLVRPGNSIDARFL
HHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCEECCCEEEECCCCCCCHHHE
TYHLSSPINQEWIIRHAVGATMPNLNTGILKRVPLNIPSLDTQKAIAHILGSLDDKIELN
EEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHH
RQMNETLEAMAQALFKSWFVDFDPLIDNALAAGNAIPDEFIERAEQRKKIEKKDNSDIQD
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHH
LFPDAFEFAEEMGWIPKGWENGILADICSYGKGKINTSELTLENYVSTENMNKEKSGISH
HCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
AANIASTNQVPKFSVGQTLISNIRPYFKKIWLASFSGGRSNDVLSFQAHNSVANEYLFNL
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHH
LYQDSFFDYMTATSKGTKMPRGDKAAIMSWSVAIPSSRLMEEFSELAKPMYLANNLRSLQ
HHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
TIELAKLRDTLLSKLMSGELCIPDAARLVDEII
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]