| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93006187
Identifier: 93006187
GI number: 93006187
Start: 1664539
End: 1665408
Strand: Direct
Name: 93006187
Synonym: Pcryo_1361
Alternate gene names: NA
Gene position: 1664539-1665408 (Clockwise)
Preceding gene: 93006186
Following gene: 93006188
Centisome position: 54.4
GC content: 38.74
Gene sequence:
>870_bases ATGAAAAAGCTTTTACTTAGTTTGGCGCTCAGCCTAAGCGTTCTATCTGCGACTCCTGCAATAGCTGCCGCTCCCGCTTT TTCTGTCAGCCAAATGGCTCAGGTAAAAATCAAAGACTTAAGCTTTAAAGAAGTCATGCGTCAGTTTTATAGTGGTCAGA TGAGACCTACCTCCGTCAATGATGAATATATTGAATCGATGCCAAATATCGGTTTAGGTCAAGTTGACAGCAATGGAGCA AGAATAGTTGCTTTAATGCATCCTATGGGACTTTATGATAACGCAAAAGGTGAACCACGTTATTTAGTGACCATTGAAAA GGTTATCGTTTATGATGAATCATCTGAATACTGTGAATCTTGCGGCTCAAAGGCAGATTTATATAGTTTTAAAAGACTAA ATAATGGACAGTTTCAATTGATAAGCAGAACACCGGAGAGCGTAGCTTTTTATGACAGATGGGGCACAATGAACCTTCAG GACAATGACATTCAAAAAACTATACAGCTGTTAGGGACAAACTTAGTAGGCAGTGTTTTTAAGAGCGGTTATATGACTCT TGGCGAAACGAACAGTTGGTGGACAGTACTACACCTGCCTGAGAATGATTTTATTAATGTTTATGCTTTGGGTGATGCTG GTTCAGATAATGACGGTCAAGACGATGAAGATTCCCCTTTATATTATAATTATGAAGGGATCGTTAAAGTAATGCCTGAA AACGCTGCTTATTATCCCATTATATTGACTTATAAAGGCATACCTCCTGATGATCCTGAGCGTCCTAACTTCGTTAATAA AAGCTTCGTTATGAAGTTCAATCCAGTAAAAAAAGTTTATGAGACGACATCCAGCTTTGCAGCTTTGTAG
Upstream 100 bases:
>100_bases GAGTTGTGTATCCCAGATGCTGCCAGACTTGTGGATGAAATAATATAGCTTTTGACAGTAAATATTTCTCTCAAAAATAT AGTAATTAATGGAGTTTAGC
Downstream 100 bases:
>100_bases GGTTCACATTGCCGTAAGCGATTACTAATGTTATTGAAAGATGCTCTATTTATCTAAAAAAGGACTTATAGTTGAAATTC ACCGAAGACAGGCTTGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MKKLLLSLALSLSVLSATPAIAAAPAFSVSQMAQVKIKDLSFKEVMRQFYSGQMRPTSVNDEYIESMPNIGLGQVDSNGA RIVALMHPMGLYDNAKGEPRYLVTIEKVIVYDESSEYCESCGSKADLYSFKRLNNGQFQLISRTPESVAFYDRWGTMNLQ DNDIQKTIQLLGTNLVGSVFKSGYMTLGETNSWWTVLHLPENDFINVYALGDAGSDNDGQDDEDSPLYYNYEGIVKVMPE NAAYYPIILTYKGIPPDDPERPNFVNKSFVMKFNPVKKVYETTSSFAAL
Sequences:
>Translated_289_residues MKKLLLSLALSLSVLSATPAIAAAPAFSVSQMAQVKIKDLSFKEVMRQFYSGQMRPTSVNDEYIESMPNIGLGQVDSNGA RIVALMHPMGLYDNAKGEPRYLVTIEKVIVYDESSEYCESCGSKADLYSFKRLNNGQFQLISRTPESVAFYDRWGTMNLQ DNDIQKTIQLLGTNLVGSVFKSGYMTLGETNSWWTVLHLPENDFINVYALGDAGSDNDGQDDEDSPLYYNYEGIVKVMPE NAAYYPIILTYKGIPPDDPERPNFVNKSFVMKFNPVKKVYETTSSFAAL >Mature_289_residues MKKLLLSLALSLSVLSATPAIAAAPAFSVSQMAQVKIKDLSFKEVMRQFYSGQMRPTSVNDEYIESMPNIGLGQVDSNGA RIVALMHPMGLYDNAKGEPRYLVTIEKVIVYDESSEYCESCGSKADLYSFKRLNNGQFQLISRTPESVAFYDRWGTMNLQ DNDIQKTIQLLGTNLVGSVFKSGYMTLGETNSWWTVLHLPENDFINVYALGDAGSDNDGQDDEDSPLYYNYEGIVKVMPE NAAYYPIILTYKGIPPDDPERPNFVNKSFVMKFNPVKKVYETTSSFAAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32301; Mature: 32301
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLLSLALSLSVLSATPAIAAAPAFSVSQMAQVKIKDLSFKEVMRQFYSGQMRPTSVN CHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHEEEECCCHHHHHHHHHCCCCCCCCCC DEYIESMPNIGLGQVDSNGARIVALMHPMGLYDNAKGEPRYLVTIEKVIVYDESSEYCES HHHHHHCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHH CGSKADLYSFKRLNNGQFQLISRTPESVAFYDRWGTMNLQDNDIQKTIQLLGTNLVGSVF CCCCCHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH KSGYMTLGETNSWWTVLHLPENDFINVYALGDAGSDNDGQDDEDSPLYYNYEGIVKVMPE HCCCEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCCEEEECCC NAAYYPIILTYKGIPPDDPERPNFVNKSFVMKFNPVKKVYETTSSFAAL CCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCC >Mature Secondary Structure MKKLLLSLALSLSVLSATPAIAAAPAFSVSQMAQVKIKDLSFKEVMRQFYSGQMRPTSVN CHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHEEEECCCHHHHHHHHHCCCCCCCCCC DEYIESMPNIGLGQVDSNGARIVALMHPMGLYDNAKGEPRYLVTIEKVIVYDESSEYCES HHHHHHCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHH CGSKADLYSFKRLNNGQFQLISRTPESVAFYDRWGTMNLQDNDIQKTIQLLGTNLVGSVF CCCCCHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH KSGYMTLGETNSWWTVLHLPENDFINVYALGDAGSDNDGQDDEDSPLYYNYEGIVKVMPE HCCCEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEECCCCEEEECCC NAAYYPIILTYKGIPPDDPERPNFVNKSFVMKFNPVKKVYETTSSFAAL CCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA