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The map label for this gene is cycH [H]

Identifier: 93006179

GI number: 93006179

Start: 1652810

End: 1654090

Strand: Direct

Name: cycH [H]

Synonym: Pcryo_1351

Alternate gene names: 93006179

Gene position: 1652810-1654090 (Clockwise)

Preceding gene: 93006178

Following gene: 93006180

Centisome position: 54.02

GC content: 43.48

Gene sequence:

>1281_bases
ATGACTCTATTTTCTACTTTTGGCTTATTTGTAACTCTAAGCTTGCTGATTGCTCTTATATTTGCGCTGATTGCTATTAT
GCCATGGCTACGAGCACCGCGTTTGCAGTCCAAACCAATAGACAATCAACTGCTAGATATTAATGTTGCAGTATTTCGCG
AACGTTTAGCTGAGCTACAAACAGATAAAGACAGCGGTACTATTAATAATAGCCATTATCAAAATCAAAAGCTGGAACTG
GAGCGTCAGCTATTAGATGCGCAGCGTCAGATAACACCTATGGTCACCCCTGATGTCAAAAGCCGTTTAATTGTCGCAGC
TTGGATCCCAATATTGGCTGCAATGGCGTATTTACTAATAGGCAATCGTACGCCCGTGTTTGATTTGTGGACAGCTGAGG
ACAAAGTAGGACAAGTGGCTGACGACCTATTGACAGCTAAAATTGACAAGCCGCCATCATGGGCGTTTGAAGATGGTCGT
CAACTGATTAGCGCCATGCAAACCAATGTTCATCGTAATGCTGATGATCCTAATCGCTGGATGCGCCTATCCGAGCTTTT
CTTATCTATGGAGGCAACTGATTCTGCGCTGGAAGCCTTATCTCGTGCCTATCGTTTAGCTCCTGAAAATGAAGAAATCG
CCACCACTTATGCTCAGACTAGCTTTTTTGTTAATGAAGGTCAGTTAGACGCTAATATTCGCCGTGTATTACAAGCTATA
TTAGCTAAAAATCCGCAGCATGAACGGGCTCAGATGCTCATGGCAATGGGTGAGACTCGTAGTAGTAACTTTGCCCAAGC
GCAAGGTTGGATTAAACGCTTACAAGGCAGCATTGTGGCCAAACCAGGTGATCATACTAAAGCTTTAGCAAGCTTAGATG
AGTTGAGTAACTACGTTAGCACGCAAGAAAAGCAAGCGCTAGAAGGTATTGACGTGACAGTGAAAATTAACGCTAATTTA
TTACCGTTAGTGAAAGCTGATGATGTGTTGTTTGTTGCGATACGTGACGTTAAAGGAGGTCCACCGTTTGCCGCCAAACG
TTTACCCATTAGTGTTATTGAGCAAGGTGAGGCCAGTATCCGCTTAAGCAATCTTGATGCGATGATGCCAGATCGCACGT
TAAATTCAGCTCGTAGTGACAAAACTCAGTTAGCAGTCGTTGCTCGTATTAGTCATAGCGGTAATGCCATAGCAGAGTCA
GGCGACTTATCGGGTAATCCGATAGTGATTAGTGCTGAACAGACTCAGGTTAATGTTGAAATCAATCAACAGATTCCCTA
A

Upstream 100 bases:

>100_bases
GTACTGCTGCCTTGACCTCTACGGAAAAGGCTGAGCTTGATCGTCTATTATCGCAAGCTGAGAGTGTCGACCACGACATT
ACTAGCCTAGAGGACAAAAA

Downstream 100 bases:

>100_bases
TAAAAAATTATTACCGTAAGTTTCATAATACCAGAGCGGTAAGTGGAGCAGTTTTTAAAAGTGGCGCTATTAATAGTCGT
ATACTAAAAACATATACGTT

Product: putative cytochrome c-type biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MTLFSTFGLFVTLSLLIALIFALIAIMPWLRAPRLQSKPIDNQLLDINVAVFRERLAELQTDKDSGTINNSHYQNQKLEL
ERQLLDAQRQITPMVTPDVKSRLIVAAWIPILAAMAYLLIGNRTPVFDLWTAEDKVGQVADDLLTAKIDKPPSWAFEDGR
QLISAMQTNVHRNADDPNRWMRLSELFLSMEATDSALEALSRAYRLAPENEEIATTYAQTSFFVNEGQLDANIRRVLQAI
LAKNPQHERAQMLMAMGETRSSNFAQAQGWIKRLQGSIVAKPGDHTKALASLDELSNYVSTQEKQALEGIDVTVKINANL
LPLVKADDVLFVAIRDVKGGPPFAAKRLPISVIEQGEASIRLSNLDAMMPDRTLNSARSDKTQLAVVARISHSGNAIAES
GDLSGNPIVISAEQTQVNVEINQQIP

Sequences:

>Translated_426_residues
MTLFSTFGLFVTLSLLIALIFALIAIMPWLRAPRLQSKPIDNQLLDINVAVFRERLAELQTDKDSGTINNSHYQNQKLEL
ERQLLDAQRQITPMVTPDVKSRLIVAAWIPILAAMAYLLIGNRTPVFDLWTAEDKVGQVADDLLTAKIDKPPSWAFEDGR
QLISAMQTNVHRNADDPNRWMRLSELFLSMEATDSALEALSRAYRLAPENEEIATTYAQTSFFVNEGQLDANIRRVLQAI
LAKNPQHERAQMLMAMGETRSSNFAQAQGWIKRLQGSIVAKPGDHTKALASLDELSNYVSTQEKQALEGIDVTVKINANL
LPLVKADDVLFVAIRDVKGGPPFAAKRLPISVIEQGEASIRLSNLDAMMPDRTLNSARSDKTQLAVVARISHSGNAIAES
GDLSGNPIVISAEQTQVNVEINQQIP
>Mature_425_residues
TLFSTFGLFVTLSLLIALIFALIAIMPWLRAPRLQSKPIDNQLLDINVAVFRERLAELQTDKDSGTINNSHYQNQKLELE
RQLLDAQRQITPMVTPDVKSRLIVAAWIPILAAMAYLLIGNRTPVFDLWTAEDKVGQVADDLLTAKIDKPPSWAFEDGRQ
LISAMQTNVHRNADDPNRWMRLSELFLSMEATDSALEALSRAYRLAPENEEIATTYAQTSFFVNEGQLDANIRRVLQAIL
AKNPQHERAQMLMAMGETRSSNFAQAQGWIKRLQGSIVAKPGDHTKALASLDELSNYVSTQEKQALEGIDVTVKINANLL
PLVKADDVLFVAIRDVKGGPPFAAKRLPISVIEQGEASIRLSNLDAMMPDRTLNSARSDKTQLAVVARISHSGNAIAESG
DLSGNPIVISAEQTQVNVEINQQIP

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG4235

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017560
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47143; Mature: 47011

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLFSTFGLFVTLSLLIALIFALIAIMPWLRAPRLQSKPIDNQLLDINVAVFRERLAELQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHC
TDKDSGTINNSHYQNQKLELERQLLDAQRQITPMVTPDVKSRLIVAAWIPILAAMAYLLI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GNRTPVFDLWTAEDKVGQVADDLLTAKIDKPPSWAFEDGRQLISAMQTNVHRNADDPNRW
CCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH
MRLSELFLSMEATDSALEALSRAYRLAPENEEIATTYAQTSFFVNEGQLDANIRRVLQAI
HHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEECCCCCHHHHHHHHHH
LAKNPQHERAQMLMAMGETRSSNFAQAQGWIKRLQGSIVAKPGDHTKALASLDELSNYVS
HHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHH
TQEKQALEGIDVTVKINANLLPLVKADDVLFVAIRDVKGGPPFAAKRLPISVIEQGEASI
HHHHHHHCCCCEEEEECCCEEEEEECCCEEEEEEEECCCCCCCHHHCCCHHHHCCCCCEE
RLSNLDAMMPDRTLNSARSDKTQLAVVARISHSGNAIAESGDLSGNPIVISAEQTQVNVE
EEECCHHHCCCCHHHHCCCCCCEEEEEEEECCCCCEEECCCCCCCCCEEEEECCEEEEEE
INQQIP
ECCCCC
>Mature Secondary Structure 
TLFSTFGLFVTLSLLIALIFALIAIMPWLRAPRLQSKPIDNQLLDINVAVFRERLAELQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHC
TDKDSGTINNSHYQNQKLELERQLLDAQRQITPMVTPDVKSRLIVAAWIPILAAMAYLLI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GNRTPVFDLWTAEDKVGQVADDLLTAKIDKPPSWAFEDGRQLISAMQTNVHRNADDPNRW
CCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH
MRLSELFLSMEATDSALEALSRAYRLAPENEEIATTYAQTSFFVNEGQLDANIRRVLQAI
HHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEECCCCCHHHHHHHHHH
LAKNPQHERAQMLMAMGETRSSNFAQAQGWIKRLQGSIVAKPGDHTKALASLDELSNYVS
HHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHH
TQEKQALEGIDVTVKINANLLPLVKADDVLFVAIRDVKGGPPFAAKRLPISVIEQGEASI
HHHHHHHCCCCEEEEECCCEEEEEECCCEEEEEEEECCCCCCCHHHCCCHHHHCCCCCEE
RLSNLDAMMPDRTLNSARSDKTQLAVVARISHSGNAIAESGDLSGNPIVISAEQTQVNVE
EEECCHHHCCCCHHHHCCCCCCEEEEEEEECCCCCEEECCCCCCCCCEEEEECCEEEEEE
INQQIP
ECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]