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The map label for this gene is 93005807

Identifier: 93005807

GI number: 93005807

Start: 1167659

End: 1168813

Strand: Reverse

Name: 93005807

Synonym: Pcryo_0979

Alternate gene names: NA

Gene position: 1168813-1167659 (Counterclockwise)

Preceding gene: 93005808

Following gene: 93005806

Centisome position: 38.2

GC content: 44.42

Gene sequence:

>1155_bases
ATGACAATGACTGCCGAATTAGAAGTAGGTTACAACGTACCCGCCGCTGTTGGTATGGACGAAGCTGACATTCAAACCCC
TTGTTTGATCTTGGATCTTGACGCCCTTGAGCGTAACGTCAAAAAAATGGGCGATTATGCTAAAGCGCATAATATGCGTC
ACCGTAGCCACGGTAAAATGCACAAATCAGTTGATGTACAAAATTTACAAGAAGAGCTTGGCGGCGCTATTGGCGTTTGC
TGTCAAAAGGTCTCTGAAGCAGAAGTATTCGTACGTGGTGGCATTAAAGACGTATTGGTATCAAACCAAGTCCGTAATCC
AGCCAAAATTGAGCGCTTAGCGAATCTACCTAAGTTGGGTGCAACCATTACCGTTTGTGTCGATGATGTCGATAACGTCG
CTGAGCTATCAGCTGCTGCGACCAAAGCAGGCACTGAACTGAACTGCTATATCGAAATCGACTGCGGTGCTGGGCGTTGT
GGTGTAACGACGACTGAAGCGGTTGTTGAGATTGCCAAAGCAATTGATGCCGCTGAAAATCTAAAATTCACTGGTATCCA
AGCTTATCAAGGTGCGATGCAACACATGGACAGCTTTAGCGATCGTAAAGCGAAAACACAAATCGCTATCGATCAAGTAC
AAGAAGCAATCGATGCATTAACTGAAATCGGGCTAAAACCAGAATTTGTATCGGGTGGCGGTACAGGTAGTTATTACTTC
GAAAGTAATTCAGGTGTTTTCAACGAATTACAGTGTGGCTCTTACGCGTTTATGGATGCCGATTACGGTCGTATTCTAGA
TGAAGACGGCAACCGTATCGATGCTGGTGAGTGGGAAAATGCATTATTCATCCTAACGTCTGTGATGAGCCATGCCAAAA
CCGACAAAGCCATCGTTGATGCTGGTCTAAAAGCTCAGTCAGTTGATAGTGGCCTACCGTTCATCTATGGTCGTGACGAT
GTTGAATATGTTAAATGTTCAGACGAGCATGGCGTAGTCAGCGATCCAAATGGCGTACTGGAAATCAATGAAAAACTAAA
ACTGGTACCTGGTCATTGTGATCCTACTTGTAACGTTCATGATTTCTATATTGGTGTGCGTAATGGTAAAGTTGAAACCG
TATGGCCAGTATCTGCACGCGGTAAAATGTACTAA

Upstream 100 bases:

>100_bases
TATCAATAACTGATTACAAATGAAGCGTTAACTAAGCGCCAGTAATGCGCAAGTTTAAACGGCTTTTTATAACACTAACT
AATAACATGGAAGAATTACA

Downstream 100 bases:

>100_bases
GCACTGTATTAGGAACTATAAGCTAAATTAGTATGATTCTATCCGTTTAGTTTAGATGGGCTGTTGTAGCTTTAGCCTAC
AGCAGCCCTTATTCATTTAA

Product: alanine racemase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MTMTAELEVGYNVPAAVGMDEADIQTPCLILDLDALERNVKKMGDYAKAHNMRHRSHGKMHKSVDVQNLQEELGGAIGVC
CQKVSEAEVFVRGGIKDVLVSNQVRNPAKIERLANLPKLGATITVCVDDVDNVAELSAAATKAGTELNCYIEIDCGAGRC
GVTTTEAVVEIAKAIDAAENLKFTGIQAYQGAMQHMDSFSDRKAKTQIAIDQVQEAIDALTEIGLKPEFVSGGGTGSYYF
ESNSGVFNELQCGSYAFMDADYGRILDEDGNRIDAGEWENALFILTSVMSHAKTDKAIVDAGLKAQSVDSGLPFIYGRDD
VEYVKCSDEHGVVSDPNGVLEINEKLKLVPGHCDPTCNVHDFYIGVRNGKVETVWPVSARGKMY

Sequences:

>Translated_384_residues
MTMTAELEVGYNVPAAVGMDEADIQTPCLILDLDALERNVKKMGDYAKAHNMRHRSHGKMHKSVDVQNLQEELGGAIGVC
CQKVSEAEVFVRGGIKDVLVSNQVRNPAKIERLANLPKLGATITVCVDDVDNVAELSAAATKAGTELNCYIEIDCGAGRC
GVTTTEAVVEIAKAIDAAENLKFTGIQAYQGAMQHMDSFSDRKAKTQIAIDQVQEAIDALTEIGLKPEFVSGGGTGSYYF
ESNSGVFNELQCGSYAFMDADYGRILDEDGNRIDAGEWENALFILTSVMSHAKTDKAIVDAGLKAQSVDSGLPFIYGRDD
VEYVKCSDEHGVVSDPNGVLEINEKLKLVPGHCDPTCNVHDFYIGVRNGKVETVWPVSARGKMY
>Mature_383_residues
TMTAELEVGYNVPAAVGMDEADIQTPCLILDLDALERNVKKMGDYAKAHNMRHRSHGKMHKSVDVQNLQEELGGAIGVCC
QKVSEAEVFVRGGIKDVLVSNQVRNPAKIERLANLPKLGATITVCVDDVDNVAELSAAATKAGTELNCYIEIDCGAGRCG
VTTTEAVVEIAKAIDAAENLKFTGIQAYQGAMQHMDSFSDRKAKTQIAIDQVQEAIDALTEIGLKPEFVSGGGTGSYYFE
SNSGVFNELQCGSYAFMDADYGRILDEDGNRIDAGEWENALFILTSVMSHAKTDKAIVDAGLKAQSVDSGLPFIYGRDDV
EYVKCSDEHGVVSDPNGVLEINEKLKLVPGHCDPTCNVHDFYIGVRNGKVETVWPVSARGKMY

Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DSD1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: =4.1.2.42 [H]

Molecular weight: Translated: 41528; Mature: 41397

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMTAELEVGYNVPAAVGMDEADIQTPCLILDLDALERNVKKMGDYAKAHNMRHRSHGKM
CCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHCCCH
HKSVDVQNLQEELGGAIGVCCQKVSEAEVFVRGGIKDVLVSNQVRNPAKIERLANLPKLG
HHCCCHHHHHHHHCHHHHHHHHHHHHHHEEEECCHHHHHHHHCCCCHHHHHHHHCCCCCC
ATITVCVDDVDNVAELSAAATKAGTELNCYIEIDCGAGRCGVTTTEAVVEIAKAIDAAEN
CEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHC
LKFTGIQAYQGAMQHMDSFSDRKAKTQIAIDQVQEAIDALTEIGLKPEFVSGGGTGSYYF
CEEECHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEE
ESNSGVFNELQCGSYAFMDADYGRILDEDGNRIDAGEWENALFILTSVMSHAKTDKAIVD
ECCCCCCCCCCCCCEEEECCCCCHHCCCCCCEECCCCCCCHHHHHHHHHHHHCCCHHHHH
AGLKAQSVDSGLPFIYGRDDVEYVKCSDEHGVVSDPNGVLEINEKLKLVPGHCDPTCNVH
CCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCEEEECCCEEEECCCCCCCCCEE
DFYIGVRNGKVETVWPVSARGKMY
EEEEEEECCEEEEEECCCCCCCCC
>Mature Secondary Structure 
TMTAELEVGYNVPAAVGMDEADIQTPCLILDLDALERNVKKMGDYAKAHNMRHRSHGKM
CEEEEEEECCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHCCCH
HKSVDVQNLQEELGGAIGVCCQKVSEAEVFVRGGIKDVLVSNQVRNPAKIERLANLPKLG
HHCCCHHHHHHHHCHHHHHHHHHHHHHHEEEECCHHHHHHHHCCCCHHHHHHHHCCCCCC
ATITVCVDDVDNVAELSAAATKAGTELNCYIEIDCGAGRCGVTTTEAVVEIAKAIDAAEN
CEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHC
LKFTGIQAYQGAMQHMDSFSDRKAKTQIAIDQVQEAIDALTEIGLKPEFVSGGGTGSYYF
CEEECHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEE
ESNSGVFNELQCGSYAFMDADYGRILDEDGNRIDAGEWENALFILTSVMSHAKTDKAIVD
ECCCCCCCCCCCCCEEEECCCCCHHCCCCCCEECCCCCCCHHHHHHHHHHHHCCCHHHHH
AGLKAQSVDSGLPFIYGRDDVEYVKCSDEHGVVSDPNGVLEINEKLKLVPGHCDPTCNVH
CCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCEEEECCCEEEECCCCCCCCCEE
DFYIGVRNGKVETVWPVSARGKMY
EEEEEEECCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9642221 [H]