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The map label for this gene is dadA [H]

Identifier: 93005728

GI number: 93005728

Start: 1066588

End: 1067841

Strand: Direct

Name: dadA [H]

Synonym: Pcryo_0900

Alternate gene names: 93005728

Gene position: 1066588-1067841 (Clockwise)

Preceding gene: 93005727

Following gene: 93005729

Centisome position: 34.86

GC content: 41.47

Gene sequence:

>1254_bases
ATGCGCTATGACGTTATTGTGATTGGTGCCGGCATAGTAGGAACCTCTATTGCTTGGCATCTGCAGAAAAACAATGCTCA
AGTTCTCTTGCTAGATAAAAAATGCCCAGGAGAAGAAACTTCCTATGGTAATGCCGGTATCATTACAAGAGAGGCGGTAA
ATACAAAACCGTTCCCTAGAAGTTTTAAAGAAATATCTAGAGTATTACCCAATAAAAGTGCTGATATTCGATACCGTTGG
TCTGCAATATATCGTCTTCAGCGCCCGTTATTACAGTATTGGATTCACTCAAGTCCAAAAAACGTTGAAGAGATTGATGA
CGAGTGGGCTACGCTTATTCAGCATTGCACAGACGAGCATGAGCCTATGATTAGAGCGTCAGGCGCTGATGAACTGGTCA
GTAAAATAGGTTGGATTGAGCTTCATTGTAAATCAAGTAGTTTTGAAAAATCCATTAATAAAGCGGTAAAAGCGGCGGAT
AAAGGCGTGGAGTATCAGGTTCTATCGCTAGCAGAGCTCCAAGCGCTAGAGCCAAATGTGAACTTTACAGATTATGTCGG
TGGTATACACTGGAAAAACTCTTGGCAGATAAAAAATCCCGGCAGTCTTGTGAAAGCATATGCTAAAAATTTTGAAGCAA
TGGCAGGAGAAATAAAACAATCCACCGTAAAAAATATGATACAGACAGAAGAGGGCTGGCAGGTCATTACCGATAGCGGA
ACCTACCTATGTCAGAATTTGGTCATTGCTGCTGGTCCTTGGTCAGCTGATCTTATTAAACCATTGGGTTATAAAATTCC
TCTATTTCCTATGCGTGGCTACCATCAACACTTTAAAAGCACCGACCAAAACGCATTTTCTCACAGCTTATTTGATGTAG
ATAAAGGGTTTGTGATGGGCACAATGGATCAAGGCGTGAGAATCACGACTGGCGCTGAAATGGCATTGTTAGATGATCCA
AAAGATTTTAATCAGTTAGAGACTGTACTGACTTTTGCAAAAAAAGTGTTGCCGCTTGATGCTGCTGTTGAATCTGAAGC
ATGGTGTGGGACAAGACCATGCATGCCAGACATGAAGCCAGTTATTGGGCCTGCATCAAAACACGATAATTTATGGTTTT
CTTTTGGTCATGCTCATCAAGGTCTGACACTTGGACCGGTGACAGGGCGTCTCATTGAAGAGATGATTCATGGTAAGCCA
TTATTTATTGATGCTCAGCCGTTTAGTAGTAAACGCTTTGATTCGAATCTTTAA

Upstream 100 bases:

>100_bases
TCTGTTGGGGCTGCCAGTTTTGATGCGGCAGTCGCTTTGAAAGTTGCTCAAAAAGCTAAAGACGAAGGTTTGGGTCAGCT
GATTACTTGGGGGTAGTGAT

Downstream 100 bases:

>100_bases
TAAACATAGATCTTAATAAACGTACCTTTTAACCCCGCTAGACCACATCTTTAACGCCCTTTACAGGCTTAATATTTATT
AAGTCTGTCGTAAAAATATC

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MRYDVIVIGAGIVGTSIAWHLQKNNAQVLLLDKKCPGEETSYGNAGIITREAVNTKPFPRSFKEISRVLPNKSADIRYRW
SAIYRLQRPLLQYWIHSSPKNVEEIDDEWATLIQHCTDEHEPMIRASGADELVSKIGWIELHCKSSSFEKSINKAVKAAD
KGVEYQVLSLAELQALEPNVNFTDYVGGIHWKNSWQIKNPGSLVKAYAKNFEAMAGEIKQSTVKNMIQTEEGWQVITDSG
TYLCQNLVIAAGPWSADLIKPLGYKIPLFPMRGYHQHFKSTDQNAFSHSLFDVDKGFVMGTMDQGVRITTGAEMALLDDP
KDFNQLETVLTFAKKVLPLDAAVESEAWCGTRPCMPDMKPVIGPASKHDNLWFSFGHAHQGLTLGPVTGRLIEEMIHGKP
LFIDAQPFSSKRFDSNL

Sequences:

>Translated_417_residues
MRYDVIVIGAGIVGTSIAWHLQKNNAQVLLLDKKCPGEETSYGNAGIITREAVNTKPFPRSFKEISRVLPNKSADIRYRW
SAIYRLQRPLLQYWIHSSPKNVEEIDDEWATLIQHCTDEHEPMIRASGADELVSKIGWIELHCKSSSFEKSINKAVKAAD
KGVEYQVLSLAELQALEPNVNFTDYVGGIHWKNSWQIKNPGSLVKAYAKNFEAMAGEIKQSTVKNMIQTEEGWQVITDSG
TYLCQNLVIAAGPWSADLIKPLGYKIPLFPMRGYHQHFKSTDQNAFSHSLFDVDKGFVMGTMDQGVRITTGAEMALLDDP
KDFNQLETVLTFAKKVLPLDAAVESEAWCGTRPCMPDMKPVIGPASKHDNLWFSFGHAHQGLTLGPVTGRLIEEMIHGKP
LFIDAQPFSSKRFDSNL
>Mature_417_residues
MRYDVIVIGAGIVGTSIAWHLQKNNAQVLLLDKKCPGEETSYGNAGIITREAVNTKPFPRSFKEISRVLPNKSADIRYRW
SAIYRLQRPLLQYWIHSSPKNVEEIDDEWATLIQHCTDEHEPMIRASGADELVSKIGWIELHCKSSSFEKSINKAVKAAD
KGVEYQVLSLAELQALEPNVNFTDYVGGIHWKNSWQIKNPGSLVKAYAKNFEAMAGEIKQSTVKNMIQTEEGWQVITDSG
TYLCQNLVIAAGPWSADLIKPLGYKIPLFPMRGYHQHFKSTDQNAFSHSLFDVDKGFVMGTMDQGVRITTGAEMALLDDP
KDFNQLETVLTFAKKVLPLDAAVESEAWCGTRPCMPDMKPVIGPASKHDNLWFSFGHAHQGLTLGPVTGRLIEEMIHGKP
LFIDAQPFSSKRFDSNL

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=428, Percent_Identity=21.7289719626168, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 46696; Mature: 46696

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYDVIVIGAGIVGTSIAWHLQKNNAQVLLLDKKCPGEETSYGNAGIITREAVNTKPFPR
CCEEEEEEECCHHHCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCH
SFKEISRVLPNKSADIRYRWSAIYRLQRPLLQYWIHSSPKNVEEIDDEWATLIQHCTDEH
HHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
EPMIRASGADELVSKIGWIELHCKSSSFEKSINKAVKAADKGVEYQVLSLAELQALEPNV
CCEEECCCHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCC
NFTDYVGGIHWKNSWQIKNPGSLVKAYAKNFEAMAGEIKQSTVKNMIQTEEGWQVITDSG
CHHHHCCCEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
TYLCQNLVIAAGPWSADLIKPLGYKIPLFPMRGYHQHFKSTDQNAFSHSLFDVDKGFVMG
HHEECCCEEEECCCCHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCEEEE
TMDQGVRITTGAEMALLDDPKDFNQLETVLTFAKKVLPLDAAVESEAWCGTRPCMPDMKP
ECCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCC
VIGPASKHDNLWFSFGHAHQGLTLGPVTGRLIEEMIHGKPLFIDAQPFSSKRFDSNL
CCCCCCCCCCEEEEECCCCCCCEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MRYDVIVIGAGIVGTSIAWHLQKNNAQVLLLDKKCPGEETSYGNAGIITREAVNTKPFPR
CCEEEEEEECCHHHCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCH
SFKEISRVLPNKSADIRYRWSAIYRLQRPLLQYWIHSSPKNVEEIDDEWATLIQHCTDEH
HHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
EPMIRASGADELVSKIGWIELHCKSSSFEKSINKAVKAADKGVEYQVLSLAELQALEPNV
CCEEECCCHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCC
NFTDYVGGIHWKNSWQIKNPGSLVKAYAKNFEAMAGEIKQSTVKNMIQTEEGWQVITDSG
CHHHHCCCEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
TYLCQNLVIAAGPWSADLIKPLGYKIPLFPMRGYHQHFKSTDQNAFSHSLFDVDKGFVMG
HHEECCCEEEECCCCHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCEEEE
TMDQGVRITTGAEMALLDDPKDFNQLETVLTFAKKVLPLDAAVESEAWCGTRPCMPDMKP
ECCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCC
VIGPASKHDNLWFSFGHAHQGLTLGPVTGRLIEEMIHGKPLFIDAQPFSSKRFDSNL
CCCCCCCCCCEEEEECCCCCCCEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA