| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is 93005729
Identifier: 93005729
GI number: 93005729
Start: 1068108
End: 1069160
Strand: Direct
Name: 93005729
Synonym: Pcryo_0901
Alternate gene names: NA
Gene position: 1068108-1069160 (Clockwise)
Preceding gene: 93005728
Following gene: 93005730
Centisome position: 34.91
GC content: 41.22
Gene sequence:
>1053_bases ATGAGTAAACAATTTATATATTCCATCTCGAGCATTCGTTTTGATGAAAATTATCAGCCTGCAGACAGCACGCGTCTGAC GACTAACTTTGCGAATTTGGCTCGTGGCGAGAGTCGTCAAGAGAACTTACGCAAAACGCTGACTATGATAAATAATCGTT TTAATGATCTAGCACACTGGGACAATCCGACAGCCGACCGTTATTCTGTTGAAGTTGATATCATTTCTGCAGACTTGGAT ATTAAAGGCAATGGTCATACCTTCCCAGTCATTGAGACCTTAAAAACAACGATCATTGATCATAAAGAAAATAAGCGTAT TGACGGTATGATTGGCAACAGCTTCTCATCCTATGTGCGCGATTATGATTTTAGCATTGTGTTACCAGAACACTTTGCAA ACCATCCAAAATCTGCGCCGCCAGAAGAGTTTGGCGATTTGCACGGTAAACTGTTTCAACATTTATTAAATTCAGATGCC TATAAAGCCAATTTTAATAAACAACCAGTGATTTGCCTAAGCGTTTCAAGTAGTAAAACCTATCATCGTACGGGTAATCA GCATCCTGTATTAGGGATTGAATATAGACAAGATGGCTGCGCTTTGAACAAAGGATCATTGACCGATGAGTACTTTTCCA AAATGGGCTTAACGGTGCGCTATTTTATGCCTGCCAACAGTGCTGCACCTTTAGCATTTTATTTTTCTGGTGACTTGCTG ACGGATTACACCGATCTTGAGCTAATCAGTGCGATCAGTACCATGGAGACCTTCCAAAAGATTTATCGACCTGAAATTTA CAATGCCAATTCCACCGCCGCTCAAATATATCAACCCAGTTTGAAGTACCAAGATTATTCACTGACGCAAATTGTGTATG ATCGCGCGGAGCGCAGCCAGATGGCAGTGACGCAAGGTAAACTTACGGAAGACGAGTTCATTAATCCTTACCAAGACATT CTTGAAGAATGGGCGGCAAGCTATGATGTTGCAAGCGAGATTGTTCAAAGAGAAGCGGCTCAAAAAGAAATGGCTAAAAA AAAGGCAGCCTAA
Upstream 100 bases:
>100_bases GTATCATTTTTATTCATGTTTTGGTTCGGGTATGATTCATCTCATACACAAATTCGGTTTTATCTCAAATAATGAGATTA GATTAAGGTAGCGAATTATC
Downstream 100 bases:
>100_bases GCAATCTAACTATAGCCAAAATATAAAATACGAATGAATAAGAAGATGAATCTCATGACAATATTATTACCGACACAAAA ATTATTACCAACATCAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MSKQFIYSISSIRFDENYQPADSTRLTTNFANLARGESRQENLRKTLTMINNRFNDLAHWDNPTADRYSVEVDIISADLD IKGNGHTFPVIETLKTTIIDHKENKRIDGMIGNSFSSYVRDYDFSIVLPEHFANHPKSAPPEEFGDLHGKLFQHLLNSDA YKANFNKQPVICLSVSSSKTYHRTGNQHPVLGIEYRQDGCALNKGSLTDEYFSKMGLTVRYFMPANSAAPLAFYFSGDLL TDYTDLELISAISTMETFQKIYRPEIYNANSTAAQIYQPSLKYQDYSLTQIVYDRAERSQMAVTQGKLTEDEFINPYQDI LEEWAASYDVASEIVQREAAQKEMAKKKAA
Sequences:
>Translated_350_residues MSKQFIYSISSIRFDENYQPADSTRLTTNFANLARGESRQENLRKTLTMINNRFNDLAHWDNPTADRYSVEVDIISADLD IKGNGHTFPVIETLKTTIIDHKENKRIDGMIGNSFSSYVRDYDFSIVLPEHFANHPKSAPPEEFGDLHGKLFQHLLNSDA YKANFNKQPVICLSVSSSKTYHRTGNQHPVLGIEYRQDGCALNKGSLTDEYFSKMGLTVRYFMPANSAAPLAFYFSGDLL TDYTDLELISAISTMETFQKIYRPEIYNANSTAAQIYQPSLKYQDYSLTQIVYDRAERSQMAVTQGKLTEDEFINPYQDI LEEWAASYDVASEIVQREAAQKEMAKKKAA >Mature_349_residues SKQFIYSISSIRFDENYQPADSTRLTTNFANLARGESRQENLRKTLTMINNRFNDLAHWDNPTADRYSVEVDIISADLDI KGNGHTFPVIETLKTTIIDHKENKRIDGMIGNSFSSYVRDYDFSIVLPEHFANHPKSAPPEEFGDLHGKLFQHLLNSDAY KANFNKQPVICLSVSSSKTYHRTGNQHPVLGIEYRQDGCALNKGSLTDEYFSKMGLTVRYFMPANSAAPLAFYFSGDLLT DYTDLELISAISTMETFQKIYRPEIYNANSTAAQIYQPSLKYQDYSLTQIVYDRAERSQMAVTQGKLTEDEFINPYQDIL EEWAASYDVASEIVQREAAQKEMAKKKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39889; Mature: 39758
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKQFIYSISSIRFDENYQPADSTRLTTNFANLARGESRQENLRKTLTMINNRFNDLAHW CCCCCEEEHHHEEECCCCCCCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC DNPTADRYSVEVDIISADLDIKGNGHTFPVIETLKTTIIDHKENKRIDGMIGNSFSSYVR CCCCCCCEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH DYDFSIVLPEHFANHPKSAPPEEFGDLHGKLFQHLLNSDAYKANFNKQPVICLSVSSSKT CCCCEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEECCCCC YHRTGNQHPVLGIEYRQDGCALNKGSLTDEYFSKMGLTVRYFMPANSAAPLAFYFSGDLL CCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCEEEEEECCHH TDYTDLELISAISTMETFQKIYRPEIYNANSTAAQIYQPSLKYQDYSLTQIVYDRAERSQ CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHH MAVTQGKLTEDEFINPYQDILEEWAASYDVASEIVQREAAQKEMAKKKAA HHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SKQFIYSISSIRFDENYQPADSTRLTTNFANLARGESRQENLRKTLTMINNRFNDLAHW CCCCEEEHHHEEECCCCCCCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC DNPTADRYSVEVDIISADLDIKGNGHTFPVIETLKTTIIDHKENKRIDGMIGNSFSSYVR CCCCCCCEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH DYDFSIVLPEHFANHPKSAPPEEFGDLHGKLFQHLLNSDAYKANFNKQPVICLSVSSSKT CCCCEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEECCCCC YHRTGNQHPVLGIEYRQDGCALNKGSLTDEYFSKMGLTVRYFMPANSAAPLAFYFSGDLL CCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCEEEEEECCHH TDYTDLELISAISTMETFQKIYRPEIYNANSTAAQIYQPSLKYQDYSLTQIVYDRAERSQ CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHH MAVTQGKLTEDEFINPYQDILEEWAASYDVASEIVQREAAQKEMAKKKAA HHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA