| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is estA [H]
Identifier: 93005705
GI number: 93005705
Start: 1039006
End: 1040892
Strand: Reverse
Name: estA [H]
Synonym: Pcryo_0877
Alternate gene names: 93005705
Gene position: 1040892-1039006 (Counterclockwise)
Preceding gene: 93005733
Following gene: 93005696
Centisome position: 34.02
GC content: 44.09
Gene sequence:
>1887_bases ATGCCTCGTAATATCTCTCACGCTATTGTTAACCCTACCACCCTTAAAACATTGACCAAAAGTATGCTTGCCATCTCGCT ATCAATGGCAGGTCTAGCGCATGCTGAGCTTTATAGCAGCGTGACATTTTTCGGCGATAGCTTGACTGATGGCGGTTATT TTAGTCCCATTACCCAAGGCAAGCTCGGTATTAAAGAGTCAGGTCAATTTACAACCAATCCTGATAACGTATGGGCAACG TCATTCGCTGAGCAGCTAGGTACAACAGCTGTTCCCATCGTTTATCTTGGAAATCAAGCTGGTAATAACTATGCTATTGG TGGTGCAAGAGCAGGCAAGGATATCGTTAATACGGACTTTGGCGTTAACGTTCCTGTTGCGTCTGTGAACACTCAAGTTA ATGGTTATCTGGCTAATAAAAAAGTTGATTCTAATGGTATGTATGTGGTGTGGGGAGGCGCAAACGATTTACTTGCGGCA GCTGCAAATCCTGCTAATGCGATAAATACGATTTCATCAGCAGCTGGCAGCCAAGTCGCCGCTATTAAAGCGCTAAAAGA TAATGGTGCCAACTATATTTTAGTACCTAATATCCCTGATATAGGTCTAACACCTACTGCTATCGCTGCAGGAGCAGGGT TTCAATCGTCTGGTACGATGTTAGCAAATTTATATAACCAAACTATGTATAGTGGCGCAGTAGCTACTGGCGCAAATATC ATACCGCTCGATACTTTTAGCTTATTACAACAAGTCGCTGCCAATCCTAAAGCTTACGGCTTTACTAATATGACTCAAAA AGCGTGCAACACTTCAAGCTCGCTTTTATGTGGATCAAGTAATTTAGTCGTGCCAGATGCCAATGAAAGCTATTTCTTTG CTGATGGCATCCACCCATCAGGACGCGCGCACCAGATGATTGCTGACTATGCTAGTGCCGTCGTTACCGCTCCTAGTCTT ATTGGCGTGTTACCGCACATTGCGACGACAGCAGGGCTAGCAACTAGTGAGCGCTTACAATCTCACATCAATCAAATCCA AAGTAGTGAACAAAAACCTGCCCGTAAGTTATGGGCAACCGGTGATTTTGAAAATCAAGATATTGCAGGGTTTGAAGGCG ATAGTAATACCCAAGTATTATTAGGTGTAGATTTTGCTCATCCTAACTCAGCACATGCGGTAACAGGCTTGTATGGCAAT ATCACTCAAAAGGATTTTGAGAATTCCGGGGTTCGCACTGGCTTAAGCAATATCGACTTAGAAGAAGTAGGCTTTGGTGT TTATCATAGCAATACGCTAGATAAGCTTGGCGGCGTGCAGCTTAATGGTGCGGTTGGCTTTGGTAATCTAGATGTTGATG TCACACGTGCGGTCACACTTGGTGGCAATAAACAAGAGTTTAACTCTAATGCTGATGGCAAACGTTACTATGCTAACTTG CAGGCAGGATATCCGATGCAGCTCAGCAGCCTTGCTATCACGCCATATATCGGTGCAACGGCTAGCCGTGTGAGATTGGA CGCGCTAAAAGAGCAAGAAATGTCTGGTATCGCCATGCAGTTTGATGAGCAAAAATATACTACCACGTATGGCAAGCTTG GCGTGAAAGCCAACCATAACCTAGCCGATTCACTTAATGTATTCGGTGATGTTCATTATCAAAAGCAGTTGAGTGACAAT CGTGAAGCGGCTTCTGCGCGTCTTAACACCATAGCAAATATCAGCTTTGATACGCCAATGGTACAGACCGACGATGATAA TTTTGGCATGACGCTTGGTGTATCCAAAAGCTTTGGTCAATTAAATGCCAATGCTGGTGTTACGCACTCGCAAGGTGATG ATGACAAATCAACGAGTTTGTTTGTCGGTCTTAGCAGCACTTACTAA
Upstream 100 bases:
>100_bases TCAACTTATATTGGGATTTACGATAAATTCGATTGCTAGGATTTTCTAAAGCAGTTACACTTCCTTAATAAACCGCTACA TTCACGACAAGGAAGTCGAT
Downstream 100 bases:
>100_bases ACGGTTTGAATCAAGCTTAGTTGCTGATAGTTTATATATTGAAGCTCAAAAAAACCGCCAAACGCTAAAAAGTGCTTGGC GGTTTTCTATTGAGATGGAT
Product: outer membrane autotransporter barrel protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 628; Mature: 627
Protein sequence:
>628_residues MPRNISHAIVNPTTLKTLTKSMLAISLSMAGLAHAELYSSVTFFGDSLTDGGYFSPITQGKLGIKESGQFTTNPDNVWAT SFAEQLGTTAVPIVYLGNQAGNNYAIGGARAGKDIVNTDFGVNVPVASVNTQVNGYLANKKVDSNGMYVVWGGANDLLAA AANPANAINTISSAAGSQVAAIKALKDNGANYILVPNIPDIGLTPTAIAAGAGFQSSGTMLANLYNQTMYSGAVATGANI IPLDTFSLLQQVAANPKAYGFTNMTQKACNTSSSLLCGSSNLVVPDANESYFFADGIHPSGRAHQMIADYASAVVTAPSL IGVLPHIATTAGLATSERLQSHINQIQSSEQKPARKLWATGDFENQDIAGFEGDSNTQVLLGVDFAHPNSAHAVTGLYGN ITQKDFENSGVRTGLSNIDLEEVGFGVYHSNTLDKLGGVQLNGAVGFGNLDVDVTRAVTLGGNKQEFNSNADGKRYYANL QAGYPMQLSSLAITPYIGATASRVRLDALKEQEMSGIAMQFDEQKYTTTYGKLGVKANHNLADSLNVFGDVHYQKQLSDN REAASARLNTIANISFDTPMVQTDDDNFGMTLGVSKSFGQLNANAGVTHSQGDDDKSTSLFVGLSSTY
Sequences:
>Translated_628_residues MPRNISHAIVNPTTLKTLTKSMLAISLSMAGLAHAELYSSVTFFGDSLTDGGYFSPITQGKLGIKESGQFTTNPDNVWAT SFAEQLGTTAVPIVYLGNQAGNNYAIGGARAGKDIVNTDFGVNVPVASVNTQVNGYLANKKVDSNGMYVVWGGANDLLAA AANPANAINTISSAAGSQVAAIKALKDNGANYILVPNIPDIGLTPTAIAAGAGFQSSGTMLANLYNQTMYSGAVATGANI IPLDTFSLLQQVAANPKAYGFTNMTQKACNTSSSLLCGSSNLVVPDANESYFFADGIHPSGRAHQMIADYASAVVTAPSL IGVLPHIATTAGLATSERLQSHINQIQSSEQKPARKLWATGDFENQDIAGFEGDSNTQVLLGVDFAHPNSAHAVTGLYGN ITQKDFENSGVRTGLSNIDLEEVGFGVYHSNTLDKLGGVQLNGAVGFGNLDVDVTRAVTLGGNKQEFNSNADGKRYYANL QAGYPMQLSSLAITPYIGATASRVRLDALKEQEMSGIAMQFDEQKYTTTYGKLGVKANHNLADSLNVFGDVHYQKQLSDN REAASARLNTIANISFDTPMVQTDDDNFGMTLGVSKSFGQLNANAGVTHSQGDDDKSTSLFVGLSSTY >Mature_627_residues PRNISHAIVNPTTLKTLTKSMLAISLSMAGLAHAELYSSVTFFGDSLTDGGYFSPITQGKLGIKESGQFTTNPDNVWATS FAEQLGTTAVPIVYLGNQAGNNYAIGGARAGKDIVNTDFGVNVPVASVNTQVNGYLANKKVDSNGMYVVWGGANDLLAAA ANPANAINTISSAAGSQVAAIKALKDNGANYILVPNIPDIGLTPTAIAAGAGFQSSGTMLANLYNQTMYSGAVATGANII PLDTFSLLQQVAANPKAYGFTNMTQKACNTSSSLLCGSSNLVVPDANESYFFADGIHPSGRAHQMIADYASAVVTAPSLI GVLPHIATTAGLATSERLQSHINQIQSSEQKPARKLWATGDFENQDIAGFEGDSNTQVLLGVDFAHPNSAHAVTGLYGNI TQKDFENSGVRTGLSNIDLEEVGFGVYHSNTLDKLGGVQLNGAVGFGNLDVDVTRAVTLGGNKQEFNSNADGKRYYANLQ AGYPMQLSSLAITPYIGATASRVRLDALKEQEMSGIAMQFDEQKYTTTYGKLGVKANHNLADSLNVFGDVHYQKQLSDNR EAASARLNTIANISFDTPMVQTDDDNFGMTLGVSKSFGQLNANAGVTHSQGDDDKSTSLFVGLSSTY
Specific function: Unknown
COG id: COG3240
COG function: function code IR; Phospholipase/lecithinase/hemolysin
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005546 - InterPro: IPR013830 - InterPro: IPR013831 - InterPro: IPR017186 - InterPro: IPR001087 - InterPro: IPR008265 - InterPro: IPR006315 [H]
Pfam domain/function: PF03797 Autotransporter; PF00657 Lipase_GDSL [H]
EC number: =3.1.1.1 [H]
Molecular weight: Translated: 65995; Mature: 65864
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRNISHAIVNPTTLKTLTKSMLAISLSMAGLAHAELYSSVTFFGDSLTDGGYFSPITQG CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCC KLGIKESGQFTTNPDNVWATSFAEQLGTTAVPIVYLGNQAGNNYAIGGARAGKDIVNTDF CCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCCCCCHHCCCC GVNVPVASVNTQVNGYLANKKVDSNGMYVVWGGANDLLAAAANPANAINTISSAAGSQVA CCCCEEEEECCEEEEEEECCEECCCCEEEEECCCCCHHEECCCCHHHHHHHHHHCCCCEE AIKALKDNGANYILVPNIPDIGLTPTAIAAGAGFQSSGTMLANLYNQTMYSGAVATGANI EEEEHHCCCCCEEEECCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCE IPLDTFSLLQQVAANPKAYGFTNMTQKACNTSSSLLCGSSNLVVPDANESYFFADGIHPS EECCHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEECCCCEEEECCCCCEEEECCCCCC GRAHQMIADYASAVVTAPSLIGVLPHIATTAGLATSERLQSHINQIQSSEQKPARKLWAT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHCCC GDFENQDIAGFEGDSNTQVLLGVDFAHPNSAHAVTGLYGNITQKDFENSGVRTGLSNIDL CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCH EEVGFGVYHSNTLDKLGGVQLNGAVGFGNLDVDVTRAVTLGGNKQEFNSNADGKRYYANL HHHCCCEEECCCHHHHCCEEEECEEEECCCCEEEEEEEEECCCHHHCCCCCCCCEEEEEE QAGYPMQLSSLAITPYIGATASRVRLDALKEQEMSGIAMQFDEQKYTTTYGKLGVKANHN CCCCCEEECCEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCEEEHHHCCCCCCCCC LADSLNVFGDVHYQKQLSDNREAASARLNTIANISFDTPMVQTDDDNFGMTLGVSKSFGQ HHHHHHHHHCHHHHHHHCCCHHHHHHHHHHEEEEECCCCEEEECCCCCCEEEECCCCCCC LNANAGVTHSQGDDDKSTSLFVGLSSTY CCCCCCCCCCCCCCCCCCEEEEEECCCC >Mature Secondary Structure PRNISHAIVNPTTLKTLTKSMLAISLSMAGLAHAELYSSVTFFGDSLTDGGYFSPITQG CCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCC KLGIKESGQFTTNPDNVWATSFAEQLGTTAVPIVYLGNQAGNNYAIGGARAGKDIVNTDF CCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCCCCCHHCCCC GVNVPVASVNTQVNGYLANKKVDSNGMYVVWGGANDLLAAAANPANAINTISSAAGSQVA CCCCEEEEECCEEEEEEECCEECCCCEEEEECCCCCHHEECCCCHHHHHHHHHHCCCCEE AIKALKDNGANYILVPNIPDIGLTPTAIAAGAGFQSSGTMLANLYNQTMYSGAVATGANI EEEEHHCCCCCEEEECCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCE IPLDTFSLLQQVAANPKAYGFTNMTQKACNTSSSLLCGSSNLVVPDANESYFFADGIHPS EECCHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEECCCCEEEECCCCCEEEECCCCCC GRAHQMIADYASAVVTAPSLIGVLPHIATTAGLATSERLQSHINQIQSSEQKPARKLWAT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHCCC GDFENQDIAGFEGDSNTQVLLGVDFAHPNSAHAVTGLYGNITQKDFENSGVRTGLSNIDL CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCH EEVGFGVYHSNTLDKLGGVQLNGAVGFGNLDVDVTRAVTLGGNKQEFNSNADGKRYYANL HHHCCCEEECCCHHHHCCEEEECEEEECCCCEEEEEEEEECCCHHHCCCCCCCCEEEEEE QAGYPMQLSSLAITPYIGATASRVRLDALKEQEMSGIAMQFDEQKYTTTYGKLGVKANHN CCCCCEEECCEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCEEEHHHCCCCCCCCC LADSLNVFGDVHYQKQLSDNREAASARLNTIANISFDTPMVQTDDDNFGMTLGVSKSFGQ HHHHHHHHHCHHHHHHHCCCHHHHHHHHHHEEEEECCCCEEEECCCCCCEEEECCCCCCC LNANAGVTHSQGDDDKSTSLFVGLSSTY CCCCCCCCCCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10559163; 10984043 [H]