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The map label for this gene is yafK [C]

Identifier: 93005670

GI number: 93005670

Start: 993927

End: 994490

Strand: Direct

Name: yafK [C]

Synonym: Pcryo_0840

Alternate gene names: 93005670

Gene position: 993927-994490 (Clockwise)

Preceding gene: 93005669

Following gene: 93005671

Centisome position: 32.48

GC content: 41.31

Gene sequence:

>564_bases
ATGTCTTTTTTCAATATAAATAGTAAATATTCACATTGGTTATTTATCGTCATAGGTTTTAGCCTCGCTATCATGACTAG
CACGAGTGCCATTGCTGCTGAGGGTGTTTCAGAGAACAAACAAGCCATGCTTAACAATATTATGATTGATAAAGTTTTTG
TCGATAAATCCGCTCGCACCCTGCAGTTGCTAAGTGATAATAAAGTTATCAAATCCTATCACATTGCCTTGGGCGGCAAT
CCTGTCGGTCATAAGCAGCAACAAGGTGACAAACGCACTCCGACAGGTTCTTATATACTCGATTATAAAAATGAAAAATC
TAAATTCTATCGCTCTATTCATGTCAGCTATCCTAATGCGGCGGATAAAGCCCGTGCCAAATCACGAGGTATTAGTCCCG
GCGGCGATATTATGATTCATGGCCAGAAAAACGGTTTTGGGCATTTGGCAGCGATAAATCAGCAACGCGACTGGACCGAT
GGCTGTATTGCCGTTACCGATAATGAGATGGATGAAATCATGGCGGCTGTAGAGATTGGTACACCTATCGAAATTGTGGA
ATAA

Upstream 100 bases:

>100_bases
ACCCTTAATTCATAAAGCTTGCACAAACTTGGCATAGTATTTTGCTATCTTATAAAAGATGGTTTTATCAATGAGCGCTT
ACCCTTAAGAAGCAAAAACT

Downstream 100 bases:

>100_bases
GCACCTTGTTAACGTATGTTTATTCAGCTCATATTTAACGTACTTTCTACTTTTATAGATATTTCTAAATCACTCATTTA
AGGTTTTTTCGATAATTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG; Lipoprotein; ErfK/YbiS/YcfS/YnhG-Related Protein; ErfK/YbiS/YcfS/YnhG Protein; Peptidoglycan L D-Transpeptidase Lipoprotein; Protein ERFK

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSFFNINSKYSHWLFIVIGFSLAIMTSTSAIAAEGVSENKQAMLNNIMIDKVFVDKSARTLQLLSDNKVIKSYHIALGGN
PVGHKQQQGDKRTPTGSYILDYKNEKSKFYRSIHVSYPNAADKARAKSRGISPGGDIMIHGQKNGFGHLAAINQQRDWTD
GCIAVTDNEMDEIMAAVEIGTPIEIVE

Sequences:

>Translated_187_residues
MSFFNINSKYSHWLFIVIGFSLAIMTSTSAIAAEGVSENKQAMLNNIMIDKVFVDKSARTLQLLSDNKVIKSYHIALGGN
PVGHKQQQGDKRTPTGSYILDYKNEKSKFYRSIHVSYPNAADKARAKSRGISPGGDIMIHGQKNGFGHLAAINQQRDWTD
GCIAVTDNEMDEIMAAVEIGTPIEIVE
>Mature_186_residues
SFFNINSKYSHWLFIVIGFSLAIMTSTSAIAAEGVSENKQAMLNNIMIDKVFVDKSARTLQLLSDNKVIKSYHIALGGNP
VGHKQQQGDKRTPTGSYILDYKNEKSKFYRSIHVSYPNAADKARAKSRGISPGGDIMIHGQKNGFGHLAAINQQRDWTDG
CIAVTDNEMDEIMAAVEIGTPIEIVE

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20623; Mature: 20492

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFNINSKYSHWLFIVIGFSLAIMTSTSAIAAEGVSENKQAMLNNIMIDKVFVDKSART
CCEECCCCCCCCEEEEEEHHHHHHHCCCCHHHHCCCCCHHHHHHHHHEEEEEEECCCCCE
LQLLSDNKVIKSYHIALGGNPVGHKQQQGDKRTPTGSYILDYKNEKSKFYRSIHVSYPNA
EEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCHHHEEEEEEEECCCH
ADKARAKSRGISPGGDIMIHGQKNGFGHLAAINQQRDWTDGCIAVTDNEMDEIMAAVEIG
HHHHHHHHCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHCC
TPIEIVE
CCEEEEC
>Mature Secondary Structure 
SFFNINSKYSHWLFIVIGFSLAIMTSTSAIAAEGVSENKQAMLNNIMIDKVFVDKSART
CEECCCCCCCCEEEEEEHHHHHHHCCCCHHHHCCCCCHHHHHHHHHEEEEEEECCCCCE
LQLLSDNKVIKSYHIALGGNPVGHKQQQGDKRTPTGSYILDYKNEKSKFYRSIHVSYPNA
EEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCHHHEEEEEEEECCCH
ADKARAKSRGISPGGDIMIHGQKNGFGHLAAINQQRDWTDGCIAVTDNEMDEIMAAVEIG
HHHHHHHHCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHCC
TPIEIVE
CCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA